RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 SMYD5Q6GMV2 418 aa8.89□□□□□ -0.99
SF3B3-210ENST00000567654 ADAM33Q9BZ11 813 aa8.89□□□□□ -0.99
SF3B3-210ENST00000567654 CDHR5Q9HBB8 845 aa8.89□□□□□ -0.99
SF3B3-210ENST00000567654 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
SF3B3-210ENST00000567654 DISP1Q96F81 1524 aa8.87□□□□□ -0.99
SF3B3-210ENST00000567654 KIAA0586Q9BVV6 1533 aa8.87□□□□□ -0.99
SF3B3-210ENST00000567654 TULP1O00294 542 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-210ENST00000567654 MAP3K7O43318 606 aa8.87□□□□□ -0.99
SF3B3-210ENST00000567654 PRKCSHP14314 528 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-210ENST00000567654 EN1Q05925 392 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-210ENST00000567654 KANK4Q5T7N3 995 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-210ENST00000567654 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
SF3B3-210ENST00000567654 EPAS1Q99814 870 aa8.87□□□□□ -0.99
SF3B3-210ENST00000567654 FYCO1Q9BQS8 1478 aa8.87□□□□□ -0.99
SF3B3-210ENST00000567654 NUP160Q12769 1436 aa8.87□□□□□ -0.99
SF3B3-210ENST00000567654 MAP3K1Q13233 1512 aa8.86□□□□□ -0.99
SF3B3-210ENST00000567654 NUTM2FA1L443 756 aa8.86□□□□□ -0.99
SF3B3-210ENST00000567654 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
SF3B3-210ENST00000567654 HS3ST6Q96QI5 342 aa8.86□□□□□ -0.99
SF3B3-210ENST00000567654 CASKIN1Q8WXD9 1431 aa8.86□□□□□ -0.99
SF3B3-210ENST00000567654 TPRNQ4KMQ1 711 aa8.85□□□□□ -0.99
SF3B3-210ENST00000567654 GPIHBP1Q8IV16 184 aa8.84□□□□□ -0.99
SF3B3-210ENST00000567654 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
SF3B3-210ENST00000567654 SHROOM2Q13796 1616 aa8.83□□□□□ -1
SF3B3-210ENST00000567654 HECW1Q76N89 1606 aa8.83□□□□□ -1
SF3B3-210ENST00000567654 LRRC9Q6ZRR7 1453 aa8.83□□□□□ -1
SF3B3-210ENST00000567654 POTEEQ6S8J3 1075 aa8.83□□□□□ -1
SF3B3-210ENST00000567654 MAGI3Q5TCQ9 1506 aa8.83□□□□□ -1
SF3B3-210ENST00000567654 RAPGEF6Q8TEU7 1601 aa8.83□□□□□ -1
SF3B3-210ENST00000567654 FMN1Q68DA7 1419 aa8.82□□□□□ -1
SF3B3-210ENST00000567654 PSEN2P49810 448 aa8.82□□□□□ -1
SF3B3-210ENST00000567654 C6orf132Q5T0Z8 1188 aa8.82□□□□□ -1
SF3B3-210ENST00000567654 FBXW7Q969H0 707 aa8.82□□□□□ -1
SF3B3-210ENST00000567654 KCNK17Q96T54 332 aa8.82□□□□□ -1
SF3B3-210ENST00000567654 COL9A1P20849 921 aa8.81□□□□□ -1
SF3B3-210ENST00000567654 ZC3H15Q8WU90 426 aaKnown RBP8.81□□□□□ -1
SF3B3-210ENST00000567654 CHMP7Q8WUX9 453 aaPredicted RBP8.81□□□□□ -1
SF3B3-210ENST00000567654 PSDA5PKW4 1024 aaPredicted RBP8.8□□□□□ -1
SF3B3-210ENST00000567654 GPR37O15354 613 aa8.8□□□□□ -1
SF3B3-210ENST00000567654 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
SF3B3-210ENST00000567654 ERCC6L2Q5T890 1561 aa8.8□□□□□ -1
SF3B3-210ENST00000567654 CDK13Q14004 1512 aaKnown RBP8.8□□□□□ -1
SF3B3-210ENST00000567654 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
SF3B3-210ENST00000567654 NPDC1Q9NQX5 325 aaPredicted RBP8.79□□□□□ -1
SF3B3-210ENST00000567654 SUPT6HQ7KZ85 1726 aaKnown RBP8.79□□□□□ -1
SF3B3-210ENST00000567654 FECHP22830 423 aa8.78□□□□□ -1
SF3B3-210ENST00000567654 HRCP23327 699 aa8.78□□□□□ -1
SF3B3-210ENST00000567654 RRBP1Q9P2E9 1410 aaKnown RBP8.78□□□□□ -1
SF3B3-210ENST00000567654 EPRSP07814 1512 aaKnown RBP8.77□□□□□ -1.01
SF3B3-210ENST00000567654 EHBP1L1Q8N3D4 1523 aa8.77□□□□□ -1.01
SF3B3-210ENST00000567654 PTPREP23469 700 aa8.77□□□□□ -1.01
SF3B3-210ENST00000567654 PTGDRQ13258 359 aa8.77□□□□□ -1.01
SF3B3-210ENST00000567654 DMRTA1Q5VZB9 504 aa8.77□□□□□ -1.01
SF3B3-210ENST00000567654 ZNF687Q8N1G0 1237 aa8.77□□□□□ -1.01
SF3B3-210ENST00000567654 PHLDB1Q86UU1 1377 aa8.76□□□□□ -1.01
SF3B3-210ENST00000567654 ATP1B4Q9UN42 357 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-210ENST00000567654 ABCA8O94911 1581 aa8.76□□□□□ -1.01
SF3B3-210ENST00000567654 NUP153P49790 1475 aaKnown RBP8.76□□□□□ -1.01
SF3B3-210ENST00000567654 FCHSD2O94868 740 aa8.75□□□□□ -1.01
SF3B3-210ENST00000567654 PROX2Q3B8N5 592 aa8.75□□□□□ -1.01
SF3B3-210ENST00000567654 CCDC18Q5T9S5 1454 aa8.75□□□□□ -1.01
SF3B3-210ENST00000567654 PLB1Q6P1J6 1458 aa8.75□□□□□ -1.01
SF3B3-210ENST00000567654 ARHGEF11O15085 1522 aa8.75□□□□□ -1.01
SF3B3-210ENST00000567654 ARHGAP33O14559 1287 aa8.73□□□□□ -1.01
SF3B3-210ENST00000567654 FAM161AQ3B820 660 aa8.73□□□□□ -1.01
SF3B3-210ENST00000567654 PADI6Q6TGC4 694 aa8.73□□□□□ -1.01
SF3B3-210ENST00000567654 KIF14Q15058 1648 aa8.72□□□□□ -1.01
SF3B3-210ENST00000567654 ADCY10Q96PN6 1610 aa8.72□□□□□ -1.01
SF3B3-210ENST00000567654 NCOA2Q15596 1464 aa8.72□□□□□ -1.01
SF3B3-210ENST00000567654 PPP1R3GB7ZBB8 358 aa8.72□□□□□ -1.01
SF3B3-210ENST00000567654 ZMYND10O75800 440 aa8.72□□□□□ -1.01
SF3B3-210ENST00000567654 FAM198AQ9UFP1 575 aa8.72□□□□□ -1.01
SF3B3-210ENST00000567654 PRG4Q92954 1404 aaPredicted RBP8.71□□□□□ -1.01
SF3B3-210ENST00000567654 GNPATO15228 680 aa8.71□□□□□ -1.02
SF3B3-210ENST00000567654 CCNB3Q8WWL7 1395 aa8.71□□□□□ -1.02
SF3B3-210ENST00000567654 CDC42BPAQ5VT25 1732 aa8.71□□□□□ -1.02
SF3B3-210ENST00000567654 CARMIL2Q6F5E8 1435 aa8.71□□□□□ -1.02
SF3B3-210ENST00000567654 PTPN23Q9H3S7 1636 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 ARID3CA6NKF2 412 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 C3orf80F5H4A9 247 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 HIC1Q14526 733 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 CDCA7LQ96GN5 454 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 ZBED2Q9BTP6 218 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 SLC24A3Q9HC58 644 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 TSKSQ9UJT2 592 aa8.7□□□□□ -1.02
SF3B3-210ENST00000567654 PRSS12P56730 875 aa8.69□□□□□ -1.02
SF3B3-210ENST00000567654 CDAN1Q8IWY9 1227 aa8.69□□□□□ -1.02
SF3B3-210ENST00000567654 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
SF3B3-210ENST00000567654 MTUS2Q5JR59 1369 aa8.69□□□□□ -1.02
SF3B3-210ENST00000567654 PBX2P40425 430 aa8.68□□□□□ -1.02
SF3B3-210ENST00000567654 BARGINQ6ZT62 677 aa8.68□□□□□ -1.02
SF3B3-210ENST00000567654 ANKRD13DQ6ZTN6 518 aa8.68□□□□□ -1.02
SF3B3-210ENST00000567654 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
SF3B3-210ENST00000567654 ITSN2Q9NZM3 1697 aa8.68□□□□□ -1.02
SF3B3-210ENST00000567654 LSM11P83369 360 aaKnown RBP eCLIP8.67□□□□□ -1.02
SF3B3-210ENST00000567654 FGD6Q6ZV73 1430 aa8.67□□□□□ -1.02
SF3B3-210ENST00000567654 ZCCHC11Q5TAX3 1644 aaKnown RBP8.66□□□□□ -1.02
SF3B3-210ENST00000567654 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms