RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 ZNF454Q8N9F8 522 aa9.08□□□□□ -0.96
SNHG1-207ENST00000537965 HAP1P54257 671 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-207ENST00000537965 COL17A1Q9UMD9 1497 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-207ENST00000537965 CD109Q6YHK3 1445 aa9.06□□□□□ -0.96
SNHG1-207ENST00000537965 MAGI3Q5TCQ9 1506 aa9.06□□□□□ -0.96
SNHG1-207ENST00000537965 SPDYE16A6NNV3 312 aaPredicted RBP9.06□□□□□ -0.96
SNHG1-207ENST00000537965 ARHGAP33O14559 1287 aa9.06□□□□□ -0.96
SNHG1-207ENST00000537965 PDIA6Q15084 440 aa9.06□□□□□ -0.96
SNHG1-207ENST00000537965 SPNS2Q8IVW8 549 aa9.06□□□□□ -0.96
SNHG1-207ENST00000537965 PTGER2P43116 358 aa9.05□□□□□ -0.96
SNHG1-207ENST00000537965 KCNH8Q96L42 1107 aa9.05□□□□□ -0.96
SNHG1-207ENST00000537965 AXIN2Q9Y2T1 843 aa9.05□□□□□ -0.96
SNHG1-207ENST00000537965 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNHG1-207ENST00000537965 BCL2L12Q9HB09 334 aa9.04□□□□□ -0.96
SNHG1-207ENST00000537965 PCDHGA10Q9Y5H3 936 aa9.04□□□□□ -0.96
SNHG1-207ENST00000537965 ABCA8O94911 1581 aa9.03□□□□□ -0.96
SNHG1-207ENST00000537965 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
SNHG1-207ENST00000537965 PHLDB1Q86UU1 1377 aa9.03□□□□□ -0.96
SNHG1-207ENST00000537965 PHF14O94880 888 aa9.03□□□□□ -0.96
SNHG1-207ENST00000537965 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
SNHG1-207ENST00000537965 ARHGEF1Q92888 912 aaKnown RBP9.02□□□□□ -0.97
SNHG1-207ENST00000537965 PSEN2P49810 448 aa9.01□□□□□ -0.97
SNHG1-207ENST00000537965 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
SNHG1-207ENST00000537965 KCNV2Q8TDN2 545 aa9.01□□□□□ -0.97
SNHG1-207ENST00000537965 ARAP3Q8WWN8 1544 aa9□□□□□ -0.97
SNHG1-207ENST00000537965 TYW1BQ6NUM6 668 aa9□□□□□ -0.97
SNHG1-207ENST00000537965 FBXW7Q969H0 707 aa9□□□□□ -0.97
SNHG1-207ENST00000537965 KCNK17Q96T54 332 aa9□□□□□ -0.97
SNHG1-207ENST00000537965 EPAS1Q99814 870 aa9□□□□□ -0.97
SNHG1-207ENST00000537965 ADAM33Q9BZ11 813 aa9□□□□□ -0.97
SNHG1-207ENST00000537965 PTPREP23469 700 aa8.99□□□□□ -0.97
SNHG1-207ENST00000537965 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
SNHG1-207ENST00000537965 DMRTA1Q5VZB9 504 aa8.99□□□□□ -0.97
SNHG1-207ENST00000537965 DDX12PQ92771 950 aa8.99□□□□□ -0.97
SNHG1-207ENST00000537965 KIF21BO75037 1637 aa8.98□□□□□ -0.97
SNHG1-207ENST00000537965 PRXQ9BXM0 1461 aa8.98□□□□□ -0.97
SNHG1-207ENST00000537965 P3H3Q8IVL6 736 aa8.98□□□□□ -0.97
SNHG1-207ENST00000537965 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
SNHG1-207ENST00000537965 TK2O00142 265 aa8.97□□□□□ -0.97
SNHG1-207ENST00000537965 ABCA9Q8IUA7 1624 aa8.97□□□□□ -0.97
SNHG1-207ENST00000537965 ADGRD1Q6QNK2 874 aa8.96□□□□□ -0.98
SNHG1-207ENST00000537965 VSIG10Q8N0Z9 540 aa8.96□□□□□ -0.98
SNHG1-207ENST00000537965 ATP10BO94823 1461 aa8.96□□□□□ -0.98
SNHG1-207ENST00000537965 SLC4A5Q9BY07 1137 aa8.95□□□□□ -0.98
SNHG1-207ENST00000537965 NEO1Q92859 1461 aa8.95□□□□□ -0.98
SNHG1-207ENST00000537965 RAPGEF6Q8TEU7 1601 aa8.94□□□□□ -0.98
SNHG1-207ENST00000537965 ADAMTSL3P82987 1691 aa8.94□□□□□ -0.98
SNHG1-207ENST00000537965 NBR1Q14596 966 aa8.94□□□□□ -0.98
SNHG1-207ENST00000537965 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
SNHG1-207ENST00000537965 FBXO41Q8TF61 875 aa8.93□□□□□ -0.98
SNHG1-207ENST00000537965 BCORL1Q5H9F3 1711 aa8.92□□□□□ -0.98
SNHG1-207ENST00000537965 ARID4BQ4LE39 1312 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-207ENST00000537965 GRXCR2A6NFK2 248 aa8.92□□□□□ -0.98
SNHG1-207ENST00000537965 ARID3CA6NKF2 412 aa8.92□□□□□ -0.98
SNHG1-207ENST00000537965 PPP1R3GB7ZBB8 358 aa8.92□□□□□ -0.98
SNHG1-207ENST00000537965 HRO43593 1189 aa8.92□□□□□ -0.98
SNHG1-207ENST00000537965 EN1Q05925 392 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-207ENST00000537965 ZBED2Q9BTP6 218 aa8.92□□□□□ -0.98
SNHG1-207ENST00000537965 VPS9D1Q9Y2B5 631 aa8.92□□□□□ -0.98
SNHG1-207ENST00000537965 SAMD9Q5K651 1589 aa8.91□□□□□ -0.98
SNHG1-207ENST00000537965 PTPRMP28827 1452 aa8.91□□□□□ -0.98
SNHG1-207ENST00000537965 PLEKHD1A6NEE1 506 aa8.91□□□□□ -0.98
SNHG1-207ENST00000537965 RAPGEF3O95398 923 aa8.91□□□□□ -0.98
SNHG1-207ENST00000537965 OSBPP22059 807 aa8.91□□□□□ -0.98
SNHG1-207ENST00000537965 RBM33Q96EV2 1170 aaKnown RBP8.91□□□□□ -0.98
SNHG1-207ENST00000537965 MYT1LQ9UL68 1186 aa8.91□□□□□ -0.98
SNHG1-207ENST00000537965 CFAP74Q9C0B2 1584 aa8.9□□□□□ -0.98
SNHG1-207ENST00000537965 SETD1BQ9UPS6 1966 aaKnown RBP8.9□□□□□ -0.98
SNHG1-207ENST00000537965 COL9A1P20849 921 aa8.9□□□□□ -0.98
SNHG1-207ENST00000537965 MAP3K7O43318 606 aa8.89□□□□□ -0.99
SNHG1-207ENST00000537965 PRIM1P49642 420 aaKnown RBP8.89□□□□□ -0.99
SNHG1-207ENST00000537965 EEA1Q15075 1411 aa8.88□□□□□ -0.99
SNHG1-207ENST00000537965 POGZQ7Z3K3 1410 aa8.88□□□□□ -0.99
SNHG1-207ENST00000537965 DENND4BO75064 1496 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-207ENST00000537965 RICTORQ6R327 1708 aa8.88□□□□□ -0.99
SNHG1-207ENST00000537965 MLLT3P42568 568 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-207ENST00000537965 TSR1Q2NL82 804 aaKnown RBP8.87□□□□□ -0.99
SNHG1-207ENST00000537965 RNF166Q96A37 237 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-207ENST00000537965 MADDQ8WXG6 1647 aa8.87□□□□□ -0.99
SNHG1-207ENST00000537965 PCF11O94913 1555 aaKnown RBP8.86□□□□□ -0.99
SNHG1-207ENST00000537965 RIMS1Q86UR5 1692 aaKnown RBP8.86□□□□□ -0.99
SNHG1-207ENST00000537965 BHMG1C9JSJ3 638 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-207ENST00000537965 AKNAQ7Z591 1439 aa8.86□□□□□ -0.99
SNHG1-207ENST00000537965 FRMPD1Q5SYB0 1578 aa8.86□□□□□ -0.99
SNHG1-207ENST00000537965 FANCAO15360 1455 aa8.85□□□□□ -0.99
SNHG1-207ENST00000537965 NUP153P49790 1475 aaKnown RBP8.85□□□□□ -0.99
SNHG1-207ENST00000537965 SEMA3EO15041 775 aa8.85□□□□□ -0.99
SNHG1-207ENST00000537965 ARHGEF40Q8TER5 1519 aa8.85□□□□□ -0.99
SNHG1-207ENST00000537965 MAGI2Q86UL8 1455 aa8.84□□□□□ -0.99
SNHG1-207ENST00000537965 ONECUT3O60422 494 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-207ENST00000537965 FHOD3Q2V2M9 1422 aa8.84□□□□□ -0.99
SNHG1-207ENST00000537965 PROX2Q3B8N5 592 aa8.84□□□□□ -0.99
SNHG1-207ENST00000537965 STAC3Q96MF2 364 aa8.84□□□□□ -0.99
SNHG1-207ENST00000537965 EFCAB5A4FU69 1503 aa8.84□□□□□ -0.99
SNHG1-207ENST00000537965 RANGAP1P46060 587 aaPredicted RBP8.83□□□□□ -1
SNHG1-207ENST00000537965 CERKQ8TCT0 537 aa8.83□□□□□ -1
SNHG1-207ENST00000537965 RABGEF1Q9UJ41 708 aa8.83□□□□□ -1
SNHG1-207ENST00000537965 ZMYM4Q5VZL5 1548 aa8.83□□□□□ -1
SNHG1-207ENST00000537965 FER1L4A9Z1Z3 1794 aa8.83□□□□□ -1
SNHG1-207ENST00000537965 LMTK3Q96Q04 1460 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms