RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 SEMA3EO15041 775 aa8.81□□□□□ -1
CD47-205ENST00000517766 THSD4Q6ZMP0 1018 aa8.81□□□□□ -1
CD47-205ENST00000517766 DDX27Q96GQ7 796 aaKnown RBP8.81□□□□□ -1
CD47-205ENST00000517766 KANK4Q5T7N3 995 aaPredicted RBP8.8□□□□□ -1
CD47-205ENST00000517766 ARHGEF1Q92888 912 aaKnown RBP8.8□□□□□ -1
CD47-205ENST00000517766 STAC3Q96MF2 364 aa8.8□□□□□ -1
CD47-205ENST00000517766 LMOD2Q6P5Q4 547 aa8.79□□□□□ -1
CD47-205ENST00000517766 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
CD47-205ENST00000517766 LRRIQ1Q96JM4 1722 aa8.79□□□□□ -1
CD47-205ENST00000517766 HECW1Q76N89 1606 aa8.79□□□□□ -1
CD47-205ENST00000517766 MFSD10Q14728 455 aa8.78□□□□□ -1
CD47-205ENST00000517766 KIAA0556O60303 1618 aa8.78□□□□□ -1
CD47-205ENST00000517766 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1
CD47-205ENST00000517766 CHMP7Q8WUX9 453 aaPredicted RBP8.77□□□□□ -1.01
CD47-205ENST00000517766 CCER1Q8TC90 406 aaPredicted RBP8.76□□□□□ -1.01
CD47-205ENST00000517766 CEP170Q5SW79 1584 aa8.76□□□□□ -1.01
CD47-205ENST00000517766 SUPT6HQ7KZ85 1726 aaKnown RBP8.76□□□□□ -1.01
CD47-205ENST00000517766 CCNB3Q8WWL7 1395 aa8.75□□□□□ -1.01
CD47-205ENST00000517766 NUP160Q12769 1436 aa8.75□□□□□ -1.01
CD47-205ENST00000517766 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
CD47-205ENST00000517766 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
CD47-205ENST00000517766 PCDHGA4Q9Y5G9 962 aa8.75□□□□□ -1.01
CD47-205ENST00000517766 EHBP1L1Q8N3D4 1523 aa8.75□□□□□ -1.01
CD47-205ENST00000517766 PPP1R15BQ5SWA1 713 aa8.74□□□□□ -1.01
CD47-205ENST00000517766 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
CD47-205ENST00000517766 DISP1Q96F81 1524 aa8.74□□□□□ -1.01
CD47-205ENST00000517766 GPHNQ9NQX3 736 aaPredicted RBP8.73□□□□□ -1.01
CD47-205ENST00000517766 CHD1O14646 1710 aa8.73□□□□□ -1.01
CD47-205ENST00000517766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
CD47-205ENST00000517766 RAPGEF6Q8TEU7 1601 aa8.72□□□□□ -1.01
CD47-205ENST00000517766 CARMIL2Q6F5E8 1435 aa8.72□□□□□ -1.01
CD47-205ENST00000517766 TESPA1A2RU30 521 aaPredicted RBP8.72□□□□□ -1.01
CD47-205ENST00000517766 NRG2O14511 850 aaPredicted RBP8.72□□□□□ -1.01
CD47-205ENST00000517766 DSG2Q14126 1118 aa8.72□□□□□ -1.01
CD47-205ENST00000517766 MTUS2Q5JR59 1369 aa8.72□□□□□ -1.01
CD47-205ENST00000517766 TULP1O00294 542 aaPredicted RBP8.71□□□□□ -1.02
CD47-205ENST00000517766 EPRSP07814 1512 aaKnown RBP8.7□□□□□ -1.02
CD47-205ENST00000517766 CAMK2BQ13554 666 aa8.7□□□□□ -1.02
CD47-205ENST00000517766 TMC2Q8TDI7 906 aa8.7□□□□□ -1.02
CD47-205ENST00000517766 VPS9D1Q9Y2B5 631 aa8.7□□□□□ -1.02
CD47-205ENST00000517766 PHLDB1Q86UU1 1377 aa8.7□□□□□ -1.02
CD47-205ENST00000517766 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
CD47-205ENST00000517766 DPYSL4O14531 572 aa8.68□□□□□ -1.02
CD47-205ENST00000517766 JPH4Q96JJ6 628 aa8.68□□□□□ -1.02
CD47-205ENST00000517766 EMILIN3Q9NT22 766 aa8.68□□□□□ -1.02
CD47-205ENST00000517766 KDM4FA0A1W2PPD8 638 aa8.67□□□□□ -1.02
CD47-205ENST00000517766 C2orf72A6NCS6 295 aa8.67□□□□□ -1.02
CD47-205ENST00000517766 ARHGEF11O15085 1522 aa8.67□□□□□ -1.02
CD47-205ENST00000517766 SLC34A2O95436 690 aa8.67□□□□□ -1.02
CD47-205ENST00000517766 MLLT3P42568 568 aaPredicted RBP8.67□□□□□ -1.02
CD47-205ENST00000517766 NCOA2Q15596 1464 aa8.67□□□□□ -1.02
CD47-205ENST00000517766 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
CD47-205ENST00000517766 CLSPNQ9HAW4 1339 aa8.67□□□□□ -1.02
CD47-205ENST00000517766 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
CD47-205ENST00000517766 FGD6Q6ZV73 1430 aa8.66□□□□□ -1.02
CD47-205ENST00000517766 SHROOM2Q13796 1616 aa8.65□□□□□ -1.02
CD47-205ENST00000517766 MAGI3Q5TCQ9 1506 aa8.65□□□□□ -1.02
CD47-205ENST00000517766 PLPP6Q8IY26 295 aa8.65□□□□□ -1.02
CD47-205ENST00000517766 CDK11AQ9UQ88 783 aaPredicted RBP8.65□□□□□ -1.02
CD47-205ENST00000517766 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.03
CD47-205ENST00000517766 CDK13Q14004 1512 aaKnown RBP8.64□□□□□ -1.03
CD47-205ENST00000517766 NUP153P49790 1475 aaKnown RBP8.64□□□□□ -1.03
CD47-205ENST00000517766 BHMG1C9JSJ3 638 aaPredicted RBP8.64□□□□□ -1.03
CD47-205ENST00000517766 KIF3CO14782 793 aa8.64□□□□□ -1.03
CD47-205ENST00000517766 FAM50AQ14320 339 aaKnown RBP8.64□□□□□ -1.03
CD47-205ENST00000517766 WNT2BQ93097 391 aa8.64□□□□□ -1.03
CD47-205ENST00000517766 ADCY10Q96PN6 1610 aa8.64□□□□□ -1.03
CD47-205ENST00000517766 ABCA8O94911 1581 aa8.64□□□□□ -1.03
CD47-205ENST00000517766 MIA2Q96PC5 1412 aa8.63□□□□□ -1.03
CD47-205ENST00000517766 ITSN2Q9NZM3 1697 aa8.63□□□□□ -1.03
CD47-205ENST00000517766 FOXK1P85037 733 aa8.63□□□□□ -1.03
CD47-205ENST00000517766 RBM26Q5T8P6 1007 aaKnown RBP8.63□□□□□ -1.03
CD47-205ENST00000517766 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
CD47-205ENST00000517766 ARIH1Q9Y4X5 557 aaPredicted RBP8.63□□□□□ -1.03
CD47-205ENST00000517766 SETD5Q9C0A6 1442 aa8.63□□□□□ -1.03
CD47-205ENST00000517766 TCOF1Q13428 1488 aaKnown RBP8.62□□□□□ -1.03
CD47-205ENST00000517766 DHX57Q6P158 1386 aaKnown RBP8.61□□□□□ -1.03
CD47-205ENST00000517766 ITGAEP38570 1179 aa8.61□□□□□ -1.03
CD47-205ENST00000517766 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
CD47-205ENST00000517766 UPF1Q92900 1129 aaKnown RBP eCLIP8.61□□□□□ -1.03
CD47-205ENST00000517766 PRG4Q92954 1404 aaPredicted RBP8.61□□□□□ -1.03
CD47-205ENST00000517766 PLB1Q6P1J6 1458 aa8.6□□□□□ -1.03
CD47-205ENST00000517766 SLC24A3Q9HC58 644 aa8.6□□□□□ -1.03
CD47-205ENST00000517766 TROQ12816 1431 aaPredicted RBP8.6□□□□□ -1.03
CD47-205ENST00000517766 RAB3GAP2Q9H2M9 1393 aa8.6□□□□□ -1.03
CD47-205ENST00000517766 STK17AQ9UEE5 414 aa8.59□□□□□ -1.03
CD47-205ENST00000517766 CLASP1Q7Z460 1538 aa8.59□□□□□ -1.03
CD47-205ENST00000517766 GCC2Q8IWJ2 1684 aa8.59□□□□□ -1.03
CD47-205ENST00000517766 KCNK17Q96T54 332 aa8.58□□□□□ -1.04
CD47-205ENST00000517766 PTPRGP23470 1445 aa8.57□□□□□ -1.04
CD47-205ENST00000517766 POTECB2RU33 542 aa8.57□□□□□ -1.04
CD47-205ENST00000517766 MAP3K9P80192 1104 aa8.57□□□□□ -1.04
CD47-205ENST00000517766 KIF14Q15058 1648 aa8.57□□□□□ -1.04
CD47-205ENST00000517766 ACIN1Q9UKV3 1341 aaKnown RBP8.56□□□□□ -1.04
CD47-205ENST00000517766 AKNAQ7Z591 1439 aa8.56□□□□□ -1.04
CD47-205ENST00000517766 GRXCR2A6NFK2 248 aa8.56□□□□□ -1.04
CD47-205ENST00000517766 PDIA6Q15084 440 aa8.56□□□□□ -1.04
CD47-205ENST00000517766 HFM1A2PYH4 1435 aa8.55□□□□□ -1.04
CD47-205ENST00000517766 DNMT1P26358 1616 aaKnown RBP8.55□□□□□ -1.04
CD47-205ENST00000517766 CDC42BPAQ5VT25 1732 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms