RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W SLM4P38247 162 aa4.28□□□□□ -1.72
PRE7YBL041W YRB2P40517 327 aa4.28□□□□□ -1.72
PRE7YBL041W RET2P43621 546 aa4.28□□□□□ -1.72
PRE7YBL041W SAM50P53969 484 aa4.28□□□□□ -1.72
PRE7YBL041W ASI3P53983 676 aa4.28□□□□□ -1.72
PRE7YBL041W CIK1Q01649 594 aa4.28□□□□□ -1.72
PRE7YBL041W SNZ1Q03148 297 aa4.28□□□□□ -1.72
PRE7YBL041W ARP10Q04549 284 aa4.28□□□□□ -1.72
PRE7YBL041W YMR315WQ04869 349 aaKnown RBP4.28□□□□□ -1.72
PRE7YBL041W SNA4Q07549 140 aa4.28□□□□□ -1.72
PRE7YBL041W CCW14O13547 238 aa4.27□□□□□ -1.73
PRE7YBL041W TDH3P00359 332 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PRE7YBL041W PDE2P06776 526 aa4.27□□□□□ -1.73
PRE7YBL041W NAM2P11325 894 aa4.27□□□□□ -1.73
PRE7YBL041W MSI1P13712 422 aa4.27□□□□□ -1.73
PRE7YBL041W RPB9P27999 122 aa4.27□□□□□ -1.73
PRE7YBL041W ECT1P33412 323 aa4.27□□□□□ -1.73
PRE7YBL041W IPT1P38954 527 aa4.27□□□□□ -1.73
PRE7YBL041W PUG1P40100 303 aa4.27□□□□□ -1.73
PRE7YBL041W VOA1P53262 265 aa4.27□□□□□ -1.73
PRE7YBL041W BUD17P53727 317 aa4.27□□□□□ -1.73
PRE7YBL041W YDC1Q02896 317 aa4.27□□□□□ -1.73
PRE7YBL041W YLR345WQ06137 509 aa4.27□□□□□ -1.73
PRE7YBL041W RKM1Q08961 583 aaPredicted RBP4.27□□□□□ -1.73
PRE7YBL041W TGS1Q12052 315 aa4.27□□□□□ -1.73
PRE7YBL041W PST2Q12335 198 aaKnown RBP4.27□□□□□ -1.73
PRE7YBL041W ERP4Q12450 207 aa4.27□□□□□ -1.73
PRE7YBL041W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PRE7YBL041W VCX1Q99385 411 aa4.27□□□□□ -1.73
PRE7YBL041W YER145C-AA0A023PYF4 145 aa4.26□□□□□ -1.73
PRE7YBL041W MES1P00958 751 aaKnown RBP4.26□□□□□ -1.73
PRE7YBL041W APA2P22108 325 aa4.26□□□□□ -1.73
PRE7YBL041W SSE2P32590 693 aaKnown RBP4.26□□□□□ -1.73
PRE7YBL041W ARC40P38328 384 aaKnown RBP4.26□□□□□ -1.73
PRE7YBL041W ARO9P38840 513 aaPredicted RBP4.26□□□□□ -1.73
PRE7YBL041W OST1P41543 476 aaKnown RBP4.26□□□□□ -1.73
PRE7YBL041W CTK2P46962 323 aa4.26□□□□□ -1.73
PRE7YBL041W ILM1P47155 203 aa4.26□□□□□ -1.73
PRE7YBL041W CPR8P53728 308 aa4.26□□□□□ -1.73
PRE7YBL041W HHT1P61830 136 aa4.26□□□□□ -1.73
PRE7YBL041W YMR099CQ03161 297 aaKnown RBP4.26□□□□□ -1.73
PRE7YBL041W GPI17Q04080 534 aa4.26□□□□□ -1.73
PRE7YBL041W TPO3Q06451 622 aa4.26□□□□□ -1.73
PRE7YBL041W FRE8Q12209 686 aa4.26□□□□□ -1.73
PRE7YBL041W KIN28P06242 306 aa4.25□□□□□ -1.73
PRE7YBL041W YGL041W-AP0C5N3 154 aa4.25□□□□□ -1.73
PRE7YBL041W IDP1P21954 428 aaKnown RBP4.25□□□□□ -1.73
PRE7YBL041W DEG1P31115 442 aaKnown RBP4.25□□□□□ -1.73
PRE7YBL041W MCH2P36032 473 aa4.25□□□□□ -1.73
PRE7YBL041W FRM2P37261 193 aa4.25□□□□□ -1.73
PRE7YBL041W YLF2P38746 405 aa4.25□□□□□ -1.73
PRE7YBL041W YHR035WP38769 630 aa4.25□□□□□ -1.73
PRE7YBL041W YER188WP40103 239 aa4.25□□□□□ -1.73
PRE7YBL041W SGN1P40561 250 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
PRE7YBL041W YJL016WP47072 561 aa4.25□□□□□ -1.73
PRE7YBL041W CCC1P47818 322 aa4.25□□□□□ -1.73
PRE7YBL041W VMA10P48836 114 aaKnown RBP4.25□□□□□ -1.73
PRE7YBL041W YIP4P53093 235 aa4.25□□□□□ -1.73
PRE7YBL041W SAY1P53324 424 aa4.25□□□□□ -1.73
PRE7YBL041W YNR048WP53740 393 aa4.25□□□□□ -1.73
PRE7YBL041W PRM15Q03262 622 aa4.25□□□□□ -1.73
PRE7YBL041W MSS11Q03825 758 aa4.25□□□□□ -1.73
PRE7YBL041W YMR087WQ04299 284 aa4.25□□□□□ -1.73
PRE7YBL041W YPR098CQ06089 161 aa4.25□□□□□ -1.73
PRE7YBL041W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
PRE7YBL041W CSI2Q08054 341 aa4.25□□□□□ -1.73
PRE7YBL041W USB1Q12208 290 aaKnown RBP4.25□□□□□ -1.73
PRE7YBL041W YCL048W-AQ2V2Q2 79 aa4.25□□□□□ -1.73
PRE7YBL041W PUT3P25502 979 aaPredicted RBP4.24□□□□□ -1.73
PRE7YBL041W NDC1P32500 655 aa4.24□□□□□ -1.73
PRE7YBL041W PRP21P32524 280 aaPredicted RBP4.24□□□□□ -1.73
PRE7YBL041W REC114P32841 428 aa4.24□□□□□ -1.73
PRE7YBL041W YOX1P34161 385 aa4.24□□□□□ -1.73
PRE7YBL041W SHE1P38200 338 aa4.24□□□□□ -1.73
PRE7YBL041W MDM31P38880 579 aa4.24□□□□□ -1.73
PRE7YBL041W SOP4P39543 234 aaPredicted RBP4.24□□□□□ -1.73
PRE7YBL041W TIR3P40552 269 aa4.24□□□□□ -1.73
PRE7YBL041W BUD8P41698 603 aa4.24□□□□□ -1.73
PRE7YBL041W CIN2P46670 268 aa4.24□□□□□ -1.73
PRE7YBL041W YHC3P47040 408 aa4.24□□□□□ -1.73
PRE7YBL041W GEP7P53171 287 aa4.24□□□□□ -1.73
PRE7YBL041W SMM1P53720 384 aaKnown RBP4.24□□□□□ -1.73
PRE7YBL041W FIN1Q03898 291 aa4.24□□□□□ -1.73
PRE7YBL041W GAL83Q04739 417 aa4.24□□□□□ -1.73
PRE7YBL041W SSK1Q07084 712 aa4.24□□□□□ -1.73
PRE7YBL041W RFU1Q08003 200 aa4.24□□□□□ -1.73
PRE7YBL041W YOR378WQ08902 515 aa4.24□□□□□ -1.73
PRE7YBL041W FRE3Q08905 711 aa4.24□□□□□ -1.73
PRE7YBL041W ISA2Q12425 185 aa4.24□□□□□ -1.73
PRE7YBL041W RPL39P04650 51 aa4.23□□□□□ -1.73
PRE7YBL041W RPL30P14120 105 aaKnown RBP4.23□□□□□ -1.73
PRE7YBL041W VMA11P32842 164 aa4.23□□□□□ -1.73
PRE7YBL041W ANR2P36090 516 aaPredicted RBP4.23□□□□□ -1.73
PRE7YBL041W YKR015CP36111 568 aa4.23□□□□□ -1.73
PRE7YBL041W THI2P38141 450 aa4.23□□□□□ -1.73
PRE7YBL041W YBR285WP38354 144 aa4.23□□□□□ -1.73
PRE7YBL041W EGD2P38879 174 aaKnown RBP4.23□□□□□ -1.73
PRE7YBL041W AIM10P39965 576 aaKnown RBP4.23□□□□□ -1.73
PRE7YBL041W SLD3P53135 668 aa4.23□□□□□ -1.73
PRE7YBL041W PXR1P53335 271 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms