Protein–RNA interactions for Protein: Q02896

YDC1, Alkaline ceramidase YDC1, yeastyeast

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YDC1Q02896 YML009W-BYML009W-B 477 nt17.49■□□□□ 0.39
YDC1Q02896 NSR1YGR159C 1245 nt17.43■□□□□ 0.38
YDC1Q02896 NOP1YDL014W 984 nt17.03■□□□□ 0.32
YDC1Q02896 YKL036CYKL036C 393 nt15.64■□□□□ 0.09
YDC1Q02896 MDJ1YFL016C 1536 nt15.48■□□□□ 0.07
YDC1Q02896 Q0297Q0297 156 nt14.85□□□□□ -0.03
YDC1Q02896 SRX1YKL086W 384 nt14.84□□□□□ -0.03
YDC1Q02896 YJL027CYJL027C 417 nt14.6□□□□□ -0.07
YDC1Q02896 SCS3YGL126W 1143 nt14.17□□□□□ -0.14
YDC1Q02896 YCR051WYCR051W 669 nt14.08□□□□□ -0.16
YDC1Q02896 DBP2YNL112W 1641 nt13.63□□□□□ -0.23
YDC1Q02896 YOL085CYOL085C 342 nt13.51□□□□□ -0.25
YDC1Q02896 TRN1tP(UGG)A 72 nt13.43□□□□□ -0.26
YDC1Q02896 SUF9tP(UGG)F 72 nt13.43□□□□□ -0.26
YDC1Q02896 SUF8tP(UGG)H 72 nt13.43□□□□□ -0.26
YDC1Q02896 tP(UGG)LtP(UGG)L 72 nt13.43□□□□□ -0.26
YDC1Q02896 SUF7tP(UGG)M 72 nt13.43□□□□□ -0.26
YDC1Q02896 tP(UGG)N1tP(UGG)N1 72 nt13.43□□□□□ -0.26
YDC1Q02896 tP(UGG)N2tP(UGG)N2 72 nt13.43□□□□□ -0.26
YDC1Q02896 tP(UGG)O1tP(UGG)O1 72 nt13.43□□□□□ -0.26
YDC1Q02896 SUF11tP(UGG)O2 72 nt13.43□□□□□ -0.26
YDC1Q02896 RPP1BYDL130W 321 nt13.33□□□□□ -0.28
YDC1Q02896 PKP1YIL042C 1185 nt13.29□□□□□ -0.28
YDC1Q02896 CCC1YLR220W 969 nt13.29□□□□□ -0.28
YDC1Q02896 YBR190WYBR190W 312 nt13.24□□□□□ -0.29
YDC1Q02896 SSA3YBL075C 1950 nt13.21□□□□□ -0.29
YDC1Q02896 RTC3YHR087W 336 nt12.96□□□□□ -0.33
YDC1Q02896 RVS167YDR388W 1449 nt12.94□□□□□ -0.34
YDC1Q02896 SCJ1YMR214W 1134 nt12.75□□□□□ -0.37
YDC1Q02896 PET122YER153C 765 nt12.71□□□□□ -0.37
YDC1Q02896 tP(UGG)O3tP(UGG)O3 72 nt12.69□□□□□ -0.38
YDC1Q02896 ATS1YAL020C 1002 nt12.67□□□□□ -0.38
YDC1Q02896 SCR1SCR1 522 nt12.63□□□□□ -0.39
YDC1Q02896 SHR5YOL110W 714 nt12.43□□□□□ -0.42
YDC1Q02896 RRN5YLR141W 1092 nt12.34□□□□□ -0.43
YDC1Q02896 YDJ1YNL064C 1230 nt12.3□□□□□ -0.44
YDC1Q02896 RSB1YOR049C 1065 nt12.11□□□□□ -0.47
YDC1Q02896 URN1YPR152C 1398 nt12.1□□□□□ -0.47
YDC1Q02896 YER088W-BYER088W-B 147 nt12.09□□□□□ -0.47
YDC1Q02896 DEP1YAL013W 1218 nt12.06□□□□□ -0.48
YDC1Q02896 GAR1YHR089C 618 nt12.01□□□□□ -0.49
YDC1Q02896 PUT4YOR348C 1884 nt12□□□□□ -0.49
YDC1Q02896 RPN10YHR200W 807 nt11.98□□□□□ -0.49
YDC1Q02896 OPI9YLR338W 858 nt11.94□□□□□ -0.5
YDC1Q02896 YNL208WYNL208W 600 nt11.91□□□□□ -0.5
YDC1Q02896 SAH1YER043C 1350 nt11.84□□□□□ -0.51
YDC1Q02896 ARE1YCR048W 1833 nt11.76□□□□□ -0.53
YDC1Q02896 PST2YDR032C 597 nt11.72□□□□□ -0.53
YDC1Q02896 YHR049C-AYHR049C-A 297 nt11.66□□□□□ -0.54
YDC1Q02896 POA1YBR022W 534 nt11.64□□□□□ -0.55
YDC1Q02896 PUN1YLR414C 792 nt11.62□□□□□ -0.55
YDC1Q02896 TIR1YER011W 765 nt11.61□□□□□ -0.55
YDC1Q02896 YJR018WYJR018W 363 nt11.55□□□□□ -0.56
YDC1Q02896 SSA4YER103W 1929 nt11.45□□□□□ -0.58
YDC1Q02896 SSA1YAL005C 1929 nt11.45□□□□□ -0.58
YDC1Q02896 PTC2YER089C 1395 nt11.44□□□□□ -0.58
YDC1Q02896 BSC6YOL137W 1494 nt11.4□□□□□ -0.58
YDC1Q02896 BUD23YCR047C 828 nt11.4□□□□□ -0.58
YDC1Q02896 RPP2BYDR382W 333 nt11.35□□□□□ -0.59
YDC1Q02896 NAB2YGL122C 1578 nt11.32□□□□□ -0.6
YDC1Q02896 SPT5YML010W 3192 nt11.29□□□□□ -0.6
YDC1Q02896 YJR120WYJR120W 351 nt11.28□□□□□ -0.6
YDC1Q02896 YKL097CYKL097C 411 nt11.28□□□□□ -0.6
YDC1Q02896 SHU1YHL006C 453 nt11.25□□□□□ -0.61
YDC1Q02896 SRB2YHR041C 633 nt11.19□□□□□ -0.62
YDC1Q02896 FPS1YLL043W 2010 nt11.18□□□□□ -0.62
YDC1Q02896 INM2YDR287W 879 nt11.17□□□□□ -0.62
YDC1Q02896 DAL1YIR027C 1383 nt11.16□□□□□ -0.62
YDC1Q02896 PAC11YDR488C 1602 nt11.14□□□□□ -0.63
YDC1Q02896 FPR4YLR449W 1179 nt11.14□□□□□ -0.63
YDC1Q02896 FIS1YIL065C 468 nt11.12□□□□□ -0.63
YDC1Q02896 WWM1YFL010C 636 nt11.07□□□□□ -0.64
YDC1Q02896 YGR021WYGR021W 873 nt11.07□□□□□ -0.64
YDC1Q02896 YAL037C-BYAL037C-B 975 nt11.07□□□□□ -0.64
YDC1Q02896 BDH2YAL061W 1254 nt11.07□□□□□ -0.64
YDC1Q02896 BDF1YLR399C 2061 nt11.06□□□□□ -0.64
YDC1Q02896 NVJ2YPR091C 2313 nt11.04□□□□□ -0.64
YDC1Q02896 PHO4YFR034C 939 nt11.04□□□□□ -0.64
YDC1Q02896 YBL100CYBL100C 315 nt11.03□□□□□ -0.64
YDC1Q02896 HOM6YJR139C 1080 nt10.97□□□□□ -0.65
YDC1Q02896 YFL021C-AYFL021C-A 855 nt10.95□□□□□ -0.66
YDC1Q02896 LSM3YLR438C-A 270 nt10.94□□□□□ -0.66
YDC1Q02896 TAT1YBR069C 1860 nt10.9□□□□□ -0.66
YDC1Q02896 MNP1YGL068W 585 nt10.89□□□□□ -0.67
YDC1Q02896 FUN26YAL022C 1554 nt10.89□□□□□ -0.67
YDC1Q02896 TRM9YML014W 840 nt10.88□□□□□ -0.67
YDC1Q02896 YPS1YLR120C 1710 nt10.83□□□□□ -0.68
YDC1Q02896 RKM5YLR137W 1104 nt10.82□□□□□ -0.68
YDC1Q02896 ALF1YNL148C 765 nt10.79□□□□□ -0.68
YDC1Q02896 YDR095CYDR095C 411 nt10.77□□□□□ -0.69
YDC1Q02896 NPL3YDR432W 1245 nt10.77□□□□□ -0.69
YDC1Q02896 YOR139CYOR139C 393 nt10.77□□□□□ -0.69
YDC1Q02896 YOL037CYOL037C 354 nt10.76□□□□□ -0.69
YDC1Q02896 CCT6YDR188W 1641 nt10.76□□□□□ -0.69
YDC1Q02896 YHR165W-AYHR165W-A 312 nt10.75□□□□□ -0.69
YDC1Q02896 SUF2tP(AGG)C 72 nt10.72□□□□□ -0.69
YDC1Q02896 SUF10tP(AGG)N 72 nt10.72□□□□□ -0.69
YDC1Q02896 MEP2YNL142W 1500 nt10.71□□□□□ -0.69
YDC1Q02896 RPP2AYOL039W 321 nt10.58□□□□□ -0.72
YDC1Q02896 SIS1YNL007C 1059 nt10.57□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms