Protein–RNA interactions for Protein: P04650

RPL39, 60S ribosomal protein L39, yeastyeast

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL39P04650 YML009W-BYML009W-B 477 nt17.28■□□□□ 0.36
RPL39P04650 NSR1YGR159C 1245 nt17.2■□□□□ 0.34
RPL39P04650 NOP1YDL014W 984 nt16.83■□□□□ 0.28
RPL39P04650 YKL036CYKL036C 393 nt15.57■□□□□ 0.08
RPL39P04650 MDJ1YFL016C 1536 nt15.21■□□□□ 0.03
RPL39P04650 Q0297Q0297 156 nt14.78□□□□□ -0.04
RPL39P04650 SRX1YKL086W 384 nt14.73□□□□□ -0.05
RPL39P04650 YJL027CYJL027C 417 nt14.51□□□□□ -0.09
RPL39P04650 SCS3YGL126W 1143 nt14.19□□□□□ -0.14
RPL39P04650 YCR051WYCR051W 669 nt13.93□□□□□ -0.18
RPL39P04650 DBP2YNL112W 1641 nt13.51□□□□□ -0.25
RPL39P04650 YOL085CYOL085C 342 nt13.49□□□□□ -0.25
RPL39P04650 TRN1tP(UGG)A 72 nt13.31□□□□□ -0.28
RPL39P04650 SUF9tP(UGG)F 72 nt13.31□□□□□ -0.28
RPL39P04650 SUF8tP(UGG)H 72 nt13.31□□□□□ -0.28
RPL39P04650 tP(UGG)LtP(UGG)L 72 nt13.31□□□□□ -0.28
RPL39P04650 SUF7tP(UGG)M 72 nt13.31□□□□□ -0.28
RPL39P04650 tP(UGG)N1tP(UGG)N1 72 nt13.31□□□□□ -0.28
RPL39P04650 tP(UGG)N2tP(UGG)N2 72 nt13.31□□□□□ -0.28
RPL39P04650 tP(UGG)O1tP(UGG)O1 72 nt13.31□□□□□ -0.28
RPL39P04650 SUF11tP(UGG)O2 72 nt13.31□□□□□ -0.28
RPL39P04650 RPP1BYDL130W 321 nt13.25□□□□□ -0.29
RPL39P04650 PKP1YIL042C 1185 nt13.24□□□□□ -0.29
RPL39P04650 CCC1YLR220W 969 nt13.1□□□□□ -0.31
RPL39P04650 YBR190WYBR190W 312 nt12.98□□□□□ -0.33
RPL39P04650 ATS1YAL020C 1002 nt12.7□□□□□ -0.38
RPL39P04650 RVS167YDR388W 1449 nt12.66□□□□□ -0.38
RPL39P04650 PET122YER153C 765 nt12.65□□□□□ -0.38
RPL39P04650 SCJ1YMR214W 1134 nt12.65□□□□□ -0.38
RPL39P04650 RTC3YHR087W 336 nt12.63□□□□□ -0.39
RPL39P04650 tP(UGG)O3tP(UGG)O3 72 nt12.58□□□□□ -0.4
RPL39P04650 SCR1SCR1 522 nt12.49□□□□□ -0.41
RPL39P04650 RRN5YLR141W 1092 nt12.27□□□□□ -0.45
RPL39P04650 SHR5YOL110W 714 nt12.26□□□□□ -0.45
RPL39P04650 YDJ1YNL064C 1230 nt12.2□□□□□ -0.46
RPL39P04650 YER088W-BYER088W-B 147 nt12.05□□□□□ -0.48
RPL39P04650 RSB1YOR049C 1065 nt12.01□□□□□ -0.49
RPL39P04650 URN1YPR152C 1398 nt11.88□□□□□ -0.51
RPL39P04650 GAR1YHR089C 618 nt11.86□□□□□ -0.51
RPL39P04650 DEP1YAL013W 1218 nt11.85□□□□□ -0.51
RPL39P04650 PST2YDR032C 597 nt11.78□□□□□ -0.52
RPL39P04650 PUT4YOR348C 1884 nt11.78□□□□□ -0.52
RPL39P04650 OPI9YLR338W 858 nt11.73□□□□□ -0.53
RPL39P04650 RPN10YHR200W 807 nt11.7□□□□□ -0.54
RPL39P04650 YNL208WYNL208W 600 nt11.7□□□□□ -0.54
RPL39P04650 SAH1YER043C 1350 nt11.62□□□□□ -0.55
RPL39P04650 ARE1YCR048W 1833 nt11.57□□□□□ -0.56
RPL39P04650 TIR1YER011W 765 nt11.49□□□□□ -0.57
RPL39P04650 YHR049C-AYHR049C-A 297 nt11.4□□□□□ -0.58
RPL39P04650 PUN1YLR414C 792 nt11.37□□□□□ -0.59
RPL39P04650 POA1YBR022W 534 nt11.37□□□□□ -0.59
RPL39P04650 SSA1YAL005C 1929 nt11.36□□□□□ -0.59
RPL39P04650 YJR018WYJR018W 363 nt11.33□□□□□ -0.6
RPL39P04650 YKL097CYKL097C 411 nt11.29□□□□□ -0.6
RPL39P04650 SHU1YHL006C 453 nt11.28□□□□□ -0.6
RPL39P04650 YJR120WYJR120W 351 nt11.22□□□□□ -0.61
RPL39P04650 PTC2YER089C 1395 nt11.2□□□□□ -0.62
RPL39P04650 SRB2YHR041C 633 nt11.19□□□□□ -0.62
RPL39P04650 BSC6YOL137W 1494 nt11.13□□□□□ -0.63
RPL39P04650 BUD23YCR047C 828 nt11.1□□□□□ -0.63
RPL39P04650 RPP2BYDR382W 333 nt11.1□□□□□ -0.63
RPL39P04650 NAB2YGL122C 1578 nt11.07□□□□□ -0.64
RPL39P04650 YAL037C-BYAL037C-B 975 nt11.05□□□□□ -0.64
RPL39P04650 WWM1YFL010C 636 nt10.98□□□□□ -0.65
RPL39P04650 YGR021WYGR021W 873 nt10.95□□□□□ -0.66
RPL39P04650 FIS1YIL065C 468 nt10.95□□□□□ -0.66
RPL39P04650 SSA3YBL075C 1950 nt10.94□□□□□ -0.66
RPL39P04650 DAL1YIR027C 1383 nt10.94□□□□□ -0.66
RPL39P04650 INM2YDR287W 879 nt10.93□□□□□ -0.66
RPL39P04650 HOM6YJR139C 1080 nt10.93□□□□□ -0.66
RPL39P04650 BDH2YAL061W 1254 nt10.92□□□□□ -0.66
RPL39P04650 YOR139CYOR139C 393 nt10.86□□□□□ -0.67
RPL39P04650 MNP1YGL068W 585 nt10.85□□□□□ -0.67
RPL39P04650 FPR4YLR449W 1179 nt10.85□□□□□ -0.67
RPL39P04650 PHO4YFR034C 939 nt10.84□□□□□ -0.67
RPL39P04650 YFL021C-AYFL021C-A 855 nt10.83□□□□□ -0.68
RPL39P04650 YBL100CYBL100C 315 nt10.83□□□□□ -0.68
RPL39P04650 LSM3YLR438C-A 270 nt10.79□□□□□ -0.68
RPL39P04650 RKM5YLR137W 1104 nt10.76□□□□□ -0.69
RPL39P04650 NPL3YDR432W 1245 nt10.73□□□□□ -0.69
RPL39P04650 FUN26YAL022C 1554 nt10.71□□□□□ -0.69
RPL39P04650 YOL037CYOL037C 354 nt10.71□□□□□ -0.69
RPL39P04650 TRM9YML014W 840 nt10.67□□□□□ -0.7
RPL39P04650 SPT5YML010W 3192 nt10.66□□□□□ -0.7
RPL39P04650 YPS1YLR120C 1710 nt10.62□□□□□ -0.71
RPL39P04650 CCT6YDR188W 1641 nt10.61□□□□□ -0.71
RPL39P04650 YDR095CYDR095C 411 nt10.58□□□□□ -0.72
RPL39P04650 ALF1YNL148C 765 nt10.51□□□□□ -0.73
RPL39P04650 SUF2tP(AGG)C 72 nt10.48□□□□□ -0.73
RPL39P04650 SUF10tP(AGG)N 72 nt10.48□□□□□ -0.73
RPL39P04650 YHR165W-AYHR165W-A 312 nt10.46□□□□□ -0.73
RPL39P04650 YLR281CYLR281C 468 nt10.46□□□□□ -0.73
RPL39P04650 MEP2YNL142W 1500 nt10.46□□□□□ -0.74
RPL39P04650 tM(CAU)CtM(CAU)C 72 nt10.44□□□□□ -0.74
RPL39P04650 IMT4tM(CAU)E 72 nt10.44□□□□□ -0.74
RPL39P04650 IMT3tM(CAU)J3 72 nt10.44□□□□□ -0.74
RPL39P04650 IMT1tM(CAU)O1 72 nt10.44□□□□□ -0.74
RPL39P04650 IMT2tM(CAU)P 72 nt10.44□□□□□ -0.74
RPL39P04650 SIS1YNL007C 1059 nt10.42□□□□□ -0.74
RPL39P04650 WHI5YOR083W 888 nt10.4□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms