Protein–RNA interactions for Protein: P43621

RET2, Coatomer subunit delta, yeastyeast

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RET2P43621 NSR1YGR159C 1245 nt18.57■□□□□ 0.56
RET2P43621 YML009W-BYML009W-B 477 nt18.27■□□□□ 0.52
RET2P43621 NOP1YDL014W 984 nt17.62■□□□□ 0.41
RET2P43621 MDJ1YFL016C 1536 nt16.87■□□□□ 0.29
RET2P43621 YKL036CYKL036C 393 nt15.83■□□□□ 0.12
RET2P43621 YJL027CYJL027C 417 nt15.56■□□□□ 0.08
RET2P43621 SRX1YKL086W 384 nt15.38■□□□□ 0.05
RET2P43621 Q0297Q0297 156 nt15.27■□□□□ 0.04
RET2P43621 DBP2YNL112W 1641 nt14.75□□□□□ -0.05
RET2P43621 YCR051WYCR051W 669 nt14.54□□□□□ -0.08
RET2P43621 YBR190WYBR190W 312 nt14.54□□□□□ -0.08
RET2P43621 SCS3YGL126W 1143 nt14.19□□□□□ -0.14
RET2P43621 RTC3YHR087W 336 nt14.17□□□□□ -0.14
RET2P43621 TRN1tP(UGG)A 72 nt14.16□□□□□ -0.14
RET2P43621 SUF9tP(UGG)F 72 nt14.16□□□□□ -0.14
RET2P43621 SUF8tP(UGG)H 72 nt14.16□□□□□ -0.14
RET2P43621 tP(UGG)LtP(UGG)L 72 nt14.16□□□□□ -0.14
RET2P43621 SUF7tP(UGG)M 72 nt14.16□□□□□ -0.14
RET2P43621 tP(UGG)N1tP(UGG)N1 72 nt14.16□□□□□ -0.14
RET2P43621 tP(UGG)N2tP(UGG)N2 72 nt14.16□□□□□ -0.14
RET2P43621 tP(UGG)O1tP(UGG)O1 72 nt14.16□□□□□ -0.14
RET2P43621 SUF11tP(UGG)O2 72 nt14.16□□□□□ -0.14
RET2P43621 CCC1YLR220W 969 nt14□□□□□ -0.17
RET2P43621 RVS167YDR388W 1449 nt13.8□□□□□ -0.2
RET2P43621 YOL085CYOL085C 342 nt13.72□□□□□ -0.21
RET2P43621 RPP1BYDL130W 321 nt13.7□□□□□ -0.22
RET2P43621 SSA3YBL075C 1950 nt13.67□□□□□ -0.22
RET2P43621 SCJ1YMR214W 1134 nt13.6□□□□□ -0.23
RET2P43621 PKP1YIL042C 1185 nt13.54□□□□□ -0.24
RET2P43621 Q0182Q0182 405 nt13.52□□□□□ -0.25
RET2P43621 PUT4YOR348C 1884 nt13.52□□□□□ -0.25
RET2P43621 tP(UGG)O3tP(UGG)O3 72 nt13.25□□□□□ -0.29
RET2P43621 SHR5YOL110W 714 nt13.21□□□□□ -0.29
RET2P43621 ARE1YCR048W 1833 nt13.13□□□□□ -0.31
RET2P43621 PET122YER153C 765 nt13.12□□□□□ -0.31
RET2P43621 URN1YPR152C 1398 nt13.1□□□□□ -0.31
RET2P43621 POA1YBR022W 534 nt13.06□□□□□ -0.32
RET2P43621 MOT3YMR070W 1473 nt13.04□□□□□ -0.32
RET2P43621 SAH1YER043C 1350 nt13.03□□□□□ -0.32
RET2P43621 OPI9YLR338W 858 nt13.02□□□□□ -0.33
RET2P43621 YHR049C-AYHR049C-A 297 nt12.97□□□□□ -0.33
RET2P43621 DEP1YAL013W 1218 nt12.96□□□□□ -0.33
RET2P43621 SCR1SCR1 522 nt12.88□□□□□ -0.35
RET2P43621 BSC6YOL137W 1494 nt12.86□□□□□ -0.35
RET2P43621 YDJ1YNL064C 1230 nt12.84□□□□□ -0.35
RET2P43621 RPN10YHR200W 807 nt12.83□□□□□ -0.36
RET2P43621 YNL208WYNL208W 600 nt12.73□□□□□ -0.37
RET2P43621 RRN5YLR141W 1092 nt12.7□□□□□ -0.38
RET2P43621 ATS1YAL020C 1002 nt12.67□□□□□ -0.38
RET2P43621 PUN1YLR414C 792 nt12.64□□□□□ -0.39
RET2P43621 BUD23YCR047C 828 nt12.63□□□□□ -0.39
RET2P43621 GAR1YHR089C 618 nt12.6□□□□□ -0.39
RET2P43621 SPT5YML010W 3192 nt12.57□□□□□ -0.4
RET2P43621 PTC2YER089C 1395 nt12.54□□□□□ -0.4
RET2P43621 YJR018WYJR018W 363 nt12.48□□□□□ -0.41
RET2P43621 NAB2YGL122C 1578 nt12.45□□□□□ -0.42
RET2P43621 YER088W-BYER088W-B 147 nt12.45□□□□□ -0.42
RET2P43621 SSA4YER103W 1929 nt12.35□□□□□ -0.43
RET2P43621 SSA1YAL005C 1929 nt12.35□□□□□ -0.43
RET2P43621 RSB1YOR049C 1065 nt12.31□□□□□ -0.44
RET2P43621 FIS1YIL065C 468 nt12.22□□□□□ -0.45
RET2P43621 TIR1YER011W 765 nt12.2□□□□□ -0.46
RET2P43621 DAL1YIR027C 1383 nt12.19□□□□□ -0.46
RET2P43621 YJR120WYJR120W 351 nt12.17□□□□□ -0.46
RET2P43621 FPR4YLR449W 1179 nt12.15□□□□□ -0.46
RET2P43621 MEP2YNL142W 1500 nt12.13□□□□□ -0.47
RET2P43621 RPP2BYDR382W 333 nt12.12□□□□□ -0.47
RET2P43621 INM2YDR287W 879 nt12.11□□□□□ -0.47
RET2P43621 PHO4YFR034C 939 nt12.08□□□□□ -0.48
RET2P43621 FPS1YLL043W 2010 nt12.02□□□□□ -0.49
RET2P43621 YPS1YLR120C 1710 nt12□□□□□ -0.49
RET2P43621 DCW1YKL046C 1350 nt11.91□□□□□ -0.5
RET2P43621 BDF1YLR399C 2061 nt11.9□□□□□ -0.5
RET2P43621 YHR165W-AYHR165W-A 312 nt11.9□□□□□ -0.5
RET2P43621 YBL100CYBL100C 315 nt11.9□□□□□ -0.5
RET2P43621 YDR095CYDR095C 411 nt11.86□□□□□ -0.51
RET2P43621 SRB2YHR041C 633 nt11.83□□□□□ -0.52
RET2P43621 BDH2YAL061W 1254 nt11.8□□□□□ -0.52
RET2P43621 EMI2YDR516C 1503 nt11.76□□□□□ -0.53
RET2P43621 PST2YDR032C 597 nt11.75□□□□□ -0.53
RET2P43621 FUN26YAL022C 1554 nt11.75□□□□□ -0.53
RET2P43621 TAT1YBR069C 1860 nt11.74□□□□□ -0.53
RET2P43621 YMR090WYMR090W 684 nt11.74□□□□□ -0.53
RET2P43621 NVJ2YPR091C 2313 nt11.72□□□□□ -0.53
RET2P43621 YBR220CYBR220C 1683 nt11.68□□□□□ -0.54
RET2P43621 ALF1YNL148C 765 nt11.67□□□□□ -0.54
RET2P43621 TRM9YML014W 840 nt11.65□□□□□ -0.54
RET2P43621 YDL221WYDL221W 552 nt11.64□□□□□ -0.55
RET2P43621 PTP1YDL230W 1008 nt11.64□□□□□ -0.55
RET2P43621 RPP2AYOL039W 321 nt11.64□□□□□ -0.55
RET2P43621 CAC2YML102W 1407 nt11.61□□□□□ -0.55
RET2P43621 WWM1YFL010C 636 nt11.58□□□□□ -0.56
RET2P43621 LSM3YLR438C-A 270 nt11.58□□□□□ -0.56
RET2P43621 SDH1YKL148C 1923 nt11.57□□□□□ -0.56
RET2P43621 CCT6YDR188W 1641 nt11.56□□□□□ -0.56
RET2P43621 PAC11YDR488C 1602 nt11.55□□□□□ -0.56
RET2P43621 SIS1YNL007C 1059 nt11.51□□□□□ -0.57
RET2P43621 SUF2tP(AGG)C 72 nt11.5□□□□□ -0.57
RET2P43621 SUF10tP(AGG)N 72 nt11.5□□□□□ -0.57
RET2P43621 IRC15YPL017C 1500 nt11.45□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms