Protein–RNA interactions for Protein: P40561

SGN1, RNA-binding protein SGN1, yeastyeast

Known RBP RIP-Chip data

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGN1P40561 YML009W-BYML009W-B 477 nt17.21■□□□□ 0.35
SGN1P40561 NSR1YGR159C 1245 nt17.09■□□□□ 0.33
SGN1P40561 NOP1YDL014W 984 nt16.84■□□□□ 0.29
SGN1P40561 YKL036CYKL036C 393 nt15.54■□□□□ 0.08
SGN1P40561 MDJ1YFL016C 1536 nt15.02■□□□□ -0
SGN1P40561 Q0297Q0297 156 nt14.7□□□□□ -0.06
SGN1P40561 SRX1YKL086W 384 nt14.66□□□□□ -0.06
SGN1P40561 YJL027CYJL027C 417 nt14.53□□□□□ -0.08
SGN1P40561 SCS3YGL126W 1143 nt14.12□□□□□ -0.15
SGN1P40561 YCR051WYCR051W 669 nt13.92□□□□□ -0.18
SGN1P40561 YOL085CYOL085C 342 nt13.43□□□□□ -0.26
SGN1P40561 DBP2YNL112W 1641 nt13.29□□□□□ -0.28
SGN1P40561 RPP1BYDL130W 321 nt13.19□□□□□ -0.3
SGN1P40561 PKP1YIL042C 1185 nt13.19□□□□□ -0.3
SGN1P40561 TRN1tP(UGG)A 72 nt13.18□□□□□ -0.3
SGN1P40561 SUF9tP(UGG)F 72 nt13.18□□□□□ -0.3
SGN1P40561 SUF8tP(UGG)H 72 nt13.18□□□□□ -0.3
SGN1P40561 tP(UGG)LtP(UGG)L 72 nt13.18□□□□□ -0.3
SGN1P40561 SUF7tP(UGG)M 72 nt13.18□□□□□ -0.3
SGN1P40561 tP(UGG)N1tP(UGG)N1 72 nt13.18□□□□□ -0.3
SGN1P40561 tP(UGG)N2tP(UGG)N2 72 nt13.18□□□□□ -0.3
SGN1P40561 tP(UGG)O1tP(UGG)O1 72 nt13.18□□□□□ -0.3
SGN1P40561 SUF11tP(UGG)O2 72 nt13.18□□□□□ -0.3
SGN1P40561 CCC1YLR220W 969 nt13.07□□□□□ -0.32
SGN1P40561 YBR190WYBR190W 312 nt12.86□□□□□ -0.35
SGN1P40561 ATS1YAL020C 1002 nt12.68□□□□□ -0.38
SGN1P40561 SCJ1YMR214W 1134 nt12.67□□□□□ -0.38
SGN1P40561 RVS167YDR388W 1449 nt12.65□□□□□ -0.38
SGN1P40561 RTC3YHR087W 336 nt12.6□□□□□ -0.39
SGN1P40561 PET122YER153C 765 nt12.55□□□□□ -0.4
SGN1P40561 SCR1SCR1 522 nt12.53□□□□□ -0.4
SGN1P40561 tP(UGG)O3tP(UGG)O3 72 nt12.51□□□□□ -0.41
SGN1P40561 Q0182Q0182 405 nt12.22□□□□□ -0.45
SGN1P40561 RRN5YLR141W 1092 nt12.22□□□□□ -0.45
SGN1P40561 SHR5YOL110W 714 nt12.18□□□□□ -0.46
SGN1P40561 YDJ1YNL064C 1230 nt12.12□□□□□ -0.47
SGN1P40561 RSB1YOR049C 1065 nt12.01□□□□□ -0.49
SGN1P40561 YER088W-BYER088W-B 147 nt11.97□□□□□ -0.49
SGN1P40561 GAR1YHR089C 618 nt11.82□□□□□ -0.52
SGN1P40561 URN1YPR152C 1398 nt11.79□□□□□ -0.52
SGN1P40561 DEP1YAL013W 1218 nt11.77□□□□□ -0.53
SGN1P40561 MOT3YMR070W 1473 nt11.75□□□□□ -0.53
SGN1P40561 PST2YDR032C 597 nt11.72□□□□□ -0.53
SGN1P40561 RPN10YHR200W 807 nt11.7□□□□□ -0.54
SGN1P40561 YNL208WYNL208W 600 nt11.65□□□□□ -0.54
SGN1P40561 OPI9YLR338W 858 nt11.61□□□□□ -0.55
SGN1P40561 PUT4YOR348C 1884 nt11.56□□□□□ -0.56
SGN1P40561 SAH1YER043C 1350 nt11.48□□□□□ -0.57
SGN1P40561 SSA3YBL075C 1950 nt11.45□□□□□ -0.58
SGN1P40561 TIR1YER011W 765 nt11.43□□□□□ -0.58
SGN1P40561 ARE1YCR048W 1833 nt11.37□□□□□ -0.59
SGN1P40561 YKL097CYKL097C 411 nt11.32□□□□□ -0.6
SGN1P40561 PUN1YLR414C 792 nt11.3□□□□□ -0.6
SGN1P40561 YJR018WYJR018W 363 nt11.26□□□□□ -0.61
SGN1P40561 YHR049C-AYHR049C-A 297 nt11.24□□□□□ -0.61
SGN1P40561 SSA1YAL005C 1929 nt11.23□□□□□ -0.61
SGN1P40561 POA1YBR022W 534 nt11.23□□□□□ -0.61
SGN1P40561 SHU1YHL006C 453 nt11.2□□□□□ -0.62
SGN1P40561 PTC2YER089C 1395 nt11.12□□□□□ -0.63
SGN1P40561 RPP2BYDR382W 333 nt11.11□□□□□ -0.63
SGN1P40561 BUD23YCR047C 828 nt11.03□□□□□ -0.64
SGN1P40561 YAL037C-BYAL037C-B 975 nt11□□□□□ -0.65
SGN1P40561 YJR120WYJR120W 351 nt10.99□□□□□ -0.65
SGN1P40561 NAB2YGL122C 1578 nt10.99□□□□□ -0.65
SGN1P40561 SRB2YHR041C 633 nt10.97□□□□□ -0.65
SGN1P40561 BSC6YOL137W 1494 nt10.96□□□□□ -0.65
SGN1P40561 YGR021WYGR021W 873 nt10.93□□□□□ -0.66
SGN1P40561 WWM1YFL010C 636 nt10.91□□□□□ -0.66
SGN1P40561 INM2YDR287W 879 nt10.89□□□□□ -0.67
SGN1P40561 BDH2YAL061W 1254 nt10.85□□□□□ -0.67
SGN1P40561 DAL1YIR027C 1383 nt10.85□□□□□ -0.67
SGN1P40561 HOM6YJR139C 1080 nt10.83□□□□□ -0.68
SGN1P40561 FPR4YLR449W 1179 nt10.83□□□□□ -0.68
SGN1P40561 YFL021C-AYFL021C-A 855 nt10.78□□□□□ -0.68
SGN1P40561 YOR139CYOR139C 393 nt10.78□□□□□ -0.68
SGN1P40561 NPL3YDR432W 1245 nt10.77□□□□□ -0.69
SGN1P40561 FIS1YIL065C 468 nt10.76□□□□□ -0.69
SGN1P40561 YBL100CYBL100C 315 nt10.76□□□□□ -0.69
SGN1P40561 MNP1YGL068W 585 nt10.75□□□□□ -0.69
SGN1P40561 LSM3YLR438C-A 270 nt10.75□□□□□ -0.69
SGN1P40561 PHO4YFR034C 939 nt10.71□□□□□ -0.69
SGN1P40561 RKM5YLR137W 1104 nt10.69□□□□□ -0.7
SGN1P40561 YOL037CYOL037C 354 nt10.69□□□□□ -0.7
SGN1P40561 TRM9YML014W 840 nt10.67□□□□□ -0.7
SGN1P40561 FUN26YAL022C 1554 nt10.62□□□□□ -0.71
SGN1P40561 CCT6YDR188W 1641 nt10.51□□□□□ -0.73
SGN1P40561 ALF1YNL148C 765 nt10.51□□□□□ -0.73
SGN1P40561 YPS1YLR120C 1710 nt10.48□□□□□ -0.73
SGN1P40561 SUF2tP(AGG)C 72 nt10.48□□□□□ -0.73
SGN1P40561 SUF10tP(AGG)N 72 nt10.48□□□□□ -0.73
SGN1P40561 YDR095CYDR095C 411 nt10.42□□□□□ -0.74
SGN1P40561 YHR165W-AYHR165W-A 312 nt10.4□□□□□ -0.74
SGN1P40561 YLR281CYLR281C 468 nt10.4□□□□□ -0.74
SGN1P40561 tM(CAU)CtM(CAU)C 72 nt10.39□□□□□ -0.75
SGN1P40561 IMT4tM(CAU)E 72 nt10.39□□□□□ -0.75
SGN1P40561 IMT3tM(CAU)J3 72 nt10.39□□□□□ -0.75
SGN1P40561 IMT1tM(CAU)O1 72 nt10.39□□□□□ -0.75
SGN1P40561 IMT2tM(CAU)P 72 nt10.39□□□□□ -0.75
SGN1P40561 WHI5YOR083W 888 nt10.36□□□□□ -0.75
SGN1P40561 PUS2YGL063W 1113 nt10.33□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms