Protein–RNA interactions for Protein: Q03825

MSS11, Transcription activator MSS11, yeastyeast

Predictions only

Length 758 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSS11Q03825 NSR1YGR159C 1245 nt17.91■□□□□ 0.46
MSS11Q03825 YML009W-BYML009W-B 477 nt17.65■□□□□ 0.42
MSS11Q03825 NOP1YDL014W 984 nt16.99■□□□□ 0.31
MSS11Q03825 MDJ1YFL016C 1536 nt16.43■□□□□ 0.22
MSS11Q03825 YKL036CYKL036C 393 nt15.65■□□□□ 0.1
MSS11Q03825 YJL027CYJL027C 417 nt15.05■□□□□ -0
MSS11Q03825 Q0297Q0297 156 nt14.9□□□□□ -0.02
MSS11Q03825 SRX1YKL086W 384 nt14.86□□□□□ -0.03
MSS11Q03825 DBP2YNL112W 1641 nt14.36□□□□□ -0.11
MSS11Q03825 SCS3YGL126W 1143 nt14.22□□□□□ -0.13
MSS11Q03825 YBR190WYBR190W 312 nt14.07□□□□□ -0.16
MSS11Q03825 YCR051WYCR051W 669 nt14.04□□□□□ -0.16
MSS11Q03825 RTC3YHR087W 336 nt13.75□□□□□ -0.21
MSS11Q03825 TRN1tP(UGG)A 72 nt13.68□□□□□ -0.22
MSS11Q03825 SUF9tP(UGG)F 72 nt13.68□□□□□ -0.22
MSS11Q03825 SUF8tP(UGG)H 72 nt13.68□□□□□ -0.22
MSS11Q03825 tP(UGG)LtP(UGG)L 72 nt13.68□□□□□ -0.22
MSS11Q03825 SUF7tP(UGG)M 72 nt13.68□□□□□ -0.22
MSS11Q03825 tP(UGG)N1tP(UGG)N1 72 nt13.68□□□□□ -0.22
MSS11Q03825 tP(UGG)N2tP(UGG)N2 72 nt13.68□□□□□ -0.22
MSS11Q03825 tP(UGG)O1tP(UGG)O1 72 nt13.68□□□□□ -0.22
MSS11Q03825 SUF11tP(UGG)O2 72 nt13.68□□□□□ -0.22
MSS11Q03825 YOL085CYOL085C 342 nt13.57□□□□□ -0.24
MSS11Q03825 CCC1YLR220W 969 nt13.56□□□□□ -0.24
MSS11Q03825 SSA3YBL075C 1950 nt13.51□□□□□ -0.25
MSS11Q03825 RPP1BYDL130W 321 nt13.35□□□□□ -0.27
MSS11Q03825 PKP1YIL042C 1185 nt13.31□□□□□ -0.28
MSS11Q03825 RVS167YDR388W 1449 nt13.29□□□□□ -0.28
MSS11Q03825 SCJ1YMR214W 1134 nt13.22□□□□□ -0.29
MSS11Q03825 PUT4YOR348C 1884 nt13.2□□□□□ -0.3
MSS11Q03825 ARE1YCR048W 1833 nt12.83□□□□□ -0.36
MSS11Q03825 tP(UGG)O3tP(UGG)O3 72 nt12.78□□□□□ -0.36
MSS11Q03825 POA1YBR022W 534 nt12.75□□□□□ -0.37
MSS11Q03825 PET122YER153C 765 nt12.74□□□□□ -0.37
MSS11Q03825 SHR5YOL110W 714 nt12.74□□□□□ -0.37
MSS11Q03825 ATS1YAL020C 1002 nt12.72□□□□□ -0.37
MSS11Q03825 URN1YPR152C 1398 nt12.71□□□□□ -0.37
MSS11Q03825 SAH1YER043C 1350 nt12.69□□□□□ -0.38
MSS11Q03825 YHR049C-AYHR049C-A 297 nt12.64□□□□□ -0.39
MSS11Q03825 DEP1YAL013W 1218 nt12.6□□□□□ -0.39
MSS11Q03825 OPI9YLR338W 858 nt12.6□□□□□ -0.39
MSS11Q03825 SCR1SCR1 522 nt12.59□□□□□ -0.39
MSS11Q03825 BSC6YOL137W 1494 nt12.56□□□□□ -0.4
MSS11Q03825 SPT5YML010W 3192 nt12.38□□□□□ -0.43
MSS11Q03825 RRN5YLR141W 1092 nt12.37□□□□□ -0.43
MSS11Q03825 RPN10YHR200W 807 nt12.33□□□□□ -0.44
MSS11Q03825 YDJ1YNL064C 1230 nt12.33□□□□□ -0.44
MSS11Q03825 BUD23YCR047C 828 nt12.31□□□□□ -0.44
MSS11Q03825 YNL208WYNL208W 600 nt12.28□□□□□ -0.44
MSS11Q03825 PUN1YLR414C 792 nt12.21□□□□□ -0.45
MSS11Q03825 PTC2YER089C 1395 nt12.19□□□□□ -0.46
MSS11Q03825 GAR1YHR089C 618 nt12.19□□□□□ -0.46
MSS11Q03825 YER088W-BYER088W-B 147 nt12.14□□□□□ -0.47
MSS11Q03825 SSA4YER103W 1929 nt12.13□□□□□ -0.47
MSS11Q03825 YJR018WYJR018W 363 nt12.08□□□□□ -0.48
MSS11Q03825 NAB2YGL122C 1578 nt12.07□□□□□ -0.48
MSS11Q03825 RSB1YOR049C 1065 nt12.07□□□□□ -0.48
MSS11Q03825 FIS1YIL065C 468 nt11.89□□□□□ -0.51
MSS11Q03825 YJR120WYJR120W 351 nt11.85□□□□□ -0.51
MSS11Q03825 MEP2YNL142W 1500 nt11.83□□□□□ -0.52
MSS11Q03825 DAL1YIR027C 1383 nt11.82□□□□□ -0.52
MSS11Q03825 PST2YDR032C 597 nt11.81□□□□□ -0.52
MSS11Q03825 FPR4YLR449W 1179 nt11.81□□□□□ -0.52
MSS11Q03825 SSA1YAL005C 1929 nt11.78□□□□□ -0.52
MSS11Q03825 TIR1YER011W 765 nt11.78□□□□□ -0.52
MSS11Q03825 BDF1YLR399C 2061 nt11.74□□□□□ -0.53
MSS11Q03825 PHO4YFR034C 939 nt11.73□□□□□ -0.53
MSS11Q03825 DCW1YKL046C 1350 nt11.68□□□□□ -0.54
MSS11Q03825 YPS1YLR120C 1710 nt11.68□□□□□ -0.54
MSS11Q03825 INM2YDR287W 879 nt11.67□□□□□ -0.54
MSS11Q03825 RPP2BYDR382W 333 nt11.67□□□□□ -0.54
MSS11Q03825 YHR165W-AYHR165W-A 312 nt11.56□□□□□ -0.56
MSS11Q03825 SRB2YHR041C 633 nt11.55□□□□□ -0.56
MSS11Q03825 TAT1YBR069C 1860 nt11.55□□□□□ -0.56
MSS11Q03825 YBL100CYBL100C 315 nt11.52□□□□□ -0.57
MSS11Q03825 YDR095CYDR095C 411 nt11.51□□□□□ -0.57
MSS11Q03825 EMI2YDR516C 1503 nt11.47□□□□□ -0.57
MSS11Q03825 YBR220CYBR220C 1683 nt11.43□□□□□ -0.58
MSS11Q03825 FUN26YAL022C 1554 nt11.38□□□□□ -0.59
MSS11Q03825 BDH2YAL061W 1254 nt11.38□□□□□ -0.59
MSS11Q03825 CAC2YML102W 1407 nt11.36□□□□□ -0.59
MSS11Q03825 YMR090WYMR090W 684 nt11.36□□□□□ -0.59
MSS11Q03825 PTP1YDL230W 1008 nt11.35□□□□□ -0.59
MSS11Q03825 YDL221WYDL221W 552 nt11.34□□□□□ -0.59
MSS11Q03825 SHU1YHL006C 453 nt11.31□□□□□ -0.6
MSS11Q03825 SDH1YKL148C 1923 nt11.3□□□□□ -0.6
MSS11Q03825 YKL097CYKL097C 411 nt11.29□□□□□ -0.6
MSS11Q03825 RPP2AYOL039W 321 nt11.29□□□□□ -0.6
MSS11Q03825 ALF1YNL148C 765 nt11.28□□□□□ -0.6
MSS11Q03825 TRM9YML014W 840 nt11.24□□□□□ -0.61
MSS11Q03825 WWM1YFL010C 636 nt11.21□□□□□ -0.61
MSS11Q03825 IRC15YPL017C 1500 nt11.18□□□□□ -0.62
MSS11Q03825 SCC4YER147C 1875 nt11.17□□□□□ -0.62
MSS11Q03825 CCT6YDR188W 1641 nt11.16□□□□□ -0.62
MSS11Q03825 SIS1YNL007C 1059 nt11.15□□□□□ -0.62
MSS11Q03825 LSM3YLR438C-A 270 nt11.12□□□□□ -0.63
MSS11Q03825 GIS3YLR094C 1509 nt11.11□□□□□ -0.63
MSS11Q03825 PCH2YBR186W 1695 nt11.09□□□□□ -0.63
MSS11Q03825 YAL037C-BYAL037C-B 975 nt11.09□□□□□ -0.63
MSS11Q03825 PAC11YDR488C 1602 nt11.07□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 43.3 ms