Protein–RNA interactions for Protein: Q99385

VCX1, Vacuolar calcium ion transporter, yeastyeast

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VCX1Q99385 NSR1YGR159C 1245 nt18.53■□□□□ 0.56
VCX1Q99385 YML009W-BYML009W-B 477 nt18.09■□□□□ 0.49
VCX1Q99385 NOP1YDL014W 984 nt17.52■□□□□ 0.4
VCX1Q99385 MDJ1YFL016C 1536 nt17.13■□□□□ 0.33
VCX1Q99385 YKL036CYKL036C 393 nt15.74■□□□□ 0.11
VCX1Q99385 YJL027CYJL027C 417 nt15.7■□□□□ 0.1
VCX1Q99385 SRX1YKL086W 384 nt15.22■□□□□ 0.03
VCX1Q99385 Q0297Q0297 156 nt15.11■□□□□ 0.01
VCX1Q99385 DBP2YNL112W 1641 nt14.92□□□□□ -0.02
VCX1Q99385 SSA3YBL075C 1950 nt14.8□□□□□ -0.04
VCX1Q99385 YBR190WYBR190W 312 nt14.77□□□□□ -0.05
VCX1Q99385 YCR051WYCR051W 669 nt14.44□□□□□ -0.1
VCX1Q99385 RTC3YHR087W 336 nt14.36□□□□□ -0.11
VCX1Q99385 TRN1tP(UGG)A 72 nt14.07□□□□□ -0.16
VCX1Q99385 SUF9tP(UGG)F 72 nt14.07□□□□□ -0.16
VCX1Q99385 SUF8tP(UGG)H 72 nt14.07□□□□□ -0.16
VCX1Q99385 tP(UGG)LtP(UGG)L 72 nt14.07□□□□□ -0.16
VCX1Q99385 SUF7tP(UGG)M 72 nt14.07□□□□□ -0.16
VCX1Q99385 tP(UGG)N1tP(UGG)N1 72 nt14.07□□□□□ -0.16
VCX1Q99385 tP(UGG)N2tP(UGG)N2 72 nt14.07□□□□□ -0.16
VCX1Q99385 tP(UGG)O1tP(UGG)O1 72 nt14.07□□□□□ -0.16
VCX1Q99385 SUF11tP(UGG)O2 72 nt14.07□□□□□ -0.16
VCX1Q99385 SCS3YGL126W 1143 nt14.06□□□□□ -0.16
VCX1Q99385 PUT4YOR348C 1884 nt13.99□□□□□ -0.17
VCX1Q99385 CCC1YLR220W 969 nt13.87□□□□□ -0.19
VCX1Q99385 RVS167YDR388W 1449 nt13.76□□□□□ -0.21
VCX1Q99385 SCJ1YMR214W 1134 nt13.65□□□□□ -0.22
VCX1Q99385 YOL085CYOL085C 342 nt13.59□□□□□ -0.23
VCX1Q99385 RPP1BYDL130W 321 nt13.57□□□□□ -0.24
VCX1Q99385 ARE1YCR048W 1833 nt13.53□□□□□ -0.24
VCX1Q99385 POA1YBR022W 534 nt13.46□□□□□ -0.25
VCX1Q99385 PKP1YIL042C 1185 nt13.41□□□□□ -0.26
VCX1Q99385 YHR049C-AYHR049C-A 297 nt13.32□□□□□ -0.28
VCX1Q99385 SPT5YML010W 3192 nt13.32□□□□□ -0.28
VCX1Q99385 BSC6YOL137W 1494 nt13.31□□□□□ -0.28
VCX1Q99385 SAH1YER043C 1350 nt13.29□□□□□ -0.28
VCX1Q99385 URN1YPR152C 1398 nt13.23□□□□□ -0.29
VCX1Q99385 OPI9YLR338W 858 nt13.19□□□□□ -0.3
VCX1Q99385 SHR5YOL110W 714 nt13.16□□□□□ -0.3
VCX1Q99385 SSA4YER103W 1929 nt13.13□□□□□ -0.31
VCX1Q99385 tP(UGG)O3tP(UGG)O3 72 nt13.1□□□□□ -0.31
VCX1Q99385 DEP1YAL013W 1218 nt13.02□□□□□ -0.33
VCX1Q99385 PET122YER153C 765 nt12.97□□□□□ -0.33
VCX1Q99385 BUD23YCR047C 828 nt12.93□□□□□ -0.34
VCX1Q99385 SCR1SCR1 522 nt12.87□□□□□ -0.35
VCX1Q99385 RPN10YHR200W 807 nt12.82□□□□□ -0.36
VCX1Q99385 PUN1YLR414C 792 nt12.77□□□□□ -0.37
VCX1Q99385 PTC2YER089C 1395 nt12.75□□□□□ -0.37
VCX1Q99385 YNL208WYNL208W 600 nt12.73□□□□□ -0.37
VCX1Q99385 BDF1YLR399C 2061 nt12.73□□□□□ -0.37
VCX1Q99385 YDJ1YNL064C 1230 nt12.69□□□□□ -0.38
VCX1Q99385 NAB2YGL122C 1578 nt12.68□□□□□ -0.38
VCX1Q99385 MEP2YNL142W 1500 nt12.58□□□□□ -0.4
VCX1Q99385 YJR018WYJR018W 363 nt12.57□□□□□ -0.4
VCX1Q99385 RRN5YLR141W 1092 nt12.57□□□□□ -0.4
VCX1Q99385 TAT1YBR069C 1860 nt12.53□□□□□ -0.4
VCX1Q99385 FIS1YIL065C 468 nt12.48□□□□□ -0.41
VCX1Q99385 ATS1YAL020C 1002 nt12.48□□□□□ -0.41
VCX1Q99385 GAR1YHR089C 618 nt12.46□□□□□ -0.41
VCX1Q99385 Q0182Q0182 405 nt12.44□□□□□ -0.42
VCX1Q99385 DAL1YIR027C 1383 nt12.39□□□□□ -0.43
VCX1Q99385 DCW1YKL046C 1350 nt12.38□□□□□ -0.43
VCX1Q99385 YER088W-BYER088W-B 147 nt12.31□□□□□ -0.44
VCX1Q99385 YJR120WYJR120W 351 nt12.31□□□□□ -0.44
VCX1Q99385 YPS1YLR120C 1710 nt12.31□□□□□ -0.44
VCX1Q99385 FPR4YLR449W 1179 nt12.3□□□□□ -0.44
VCX1Q99385 PHO4YFR034C 939 nt12.28□□□□□ -0.44
VCX1Q99385 RSB1YOR049C 1065 nt12.25□□□□□ -0.45
VCX1Q99385 YBR220CYBR220C 1683 nt12.22□□□□□ -0.45
VCX1Q99385 PAC11YDR488C 1602 nt12.22□□□□□ -0.45
VCX1Q99385 INM2YDR287W 879 nt12.19□□□□□ -0.46
VCX1Q99385 EMI2YDR516C 1503 nt12.17□□□□□ -0.46
VCX1Q99385 YHR165W-AYHR165W-A 312 nt12.17□□□□□ -0.46
VCX1Q99385 SSA1YAL005C 1929 nt12.11□□□□□ -0.47
VCX1Q99385 YDR095CYDR095C 411 nt12.11□□□□□ -0.47
VCX1Q99385 RPP2BYDR382W 333 nt12.09□□□□□ -0.47
VCX1Q99385 YMR090WYMR090W 684 nt12.09□□□□□ -0.47
VCX1Q99385 TIR1YER011W 765 nt12.08□□□□□ -0.48
VCX1Q99385 YDL221WYDL221W 552 nt12.04□□□□□ -0.48
VCX1Q99385 SDH1YKL148C 1923 nt12.03□□□□□ -0.48
VCX1Q99385 CAC2YML102W 1407 nt11.98□□□□□ -0.49
VCX1Q99385 YBL100CYBL100C 315 nt11.98□□□□□ -0.49
VCX1Q99385 MOT3YMR070W 1473 nt11.95□□□□□ -0.5
VCX1Q99385 PTP1YDL230W 1008 nt11.94□□□□□ -0.5
VCX1Q99385 PCH2YBR186W 1695 nt11.92□□□□□ -0.5
VCX1Q99385 GUT2YIL155C 1950 nt11.89□□□□□ -0.51
VCX1Q99385 NVJ2YPR091C 2313 nt11.87□□□□□ -0.51
VCX1Q99385 RPP2AYOL039W 321 nt11.86□□□□□ -0.51
VCX1Q99385 SCC4YER147C 1875 nt11.84□□□□□ -0.51
VCX1Q99385 SRB2YHR041C 633 nt11.82□□□□□ -0.52
VCX1Q99385 SEC11YIR022W 504 nt11.82□□□□□ -0.52
VCX1Q99385 FUN26YAL022C 1554 nt11.82□□□□□ -0.52
VCX1Q99385 IRC15YPL017C 1500 nt11.8□□□□□ -0.52
VCX1Q99385 BDH2YAL061W 1254 nt11.77□□□□□ -0.53
VCX1Q99385 ALF1YNL148C 765 nt11.75□□□□□ -0.53
VCX1Q99385 PIB2YGL023C 1908 nt11.74□□□□□ -0.53
VCX1Q99385 GIS3YLR094C 1509 nt11.72□□□□□ -0.53
VCX1Q99385 YSC84YHR016C 1407 nt11.66□□□□□ -0.54
VCX1Q99385 SIS1YNL007C 1059 nt11.65□□□□□ -0.54
VCX1Q99385 TRM9YML014W 840 nt11.64□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms