Protein–RNA interactions for Protein: P53969

SAM50, Sorting assembly machinery 50 kDa subunit, yeastyeast

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SAM50P53969 NSR1YGR159C 1245 nt17.87■□□□□ 0.45
SAM50P53969 YML009W-BYML009W-B 477 nt17.81■□□□□ 0.44
SAM50P53969 NOP1YDL014W 984 nt17.25■□□□□ 0.35
SAM50P53969 MDJ1YFL016C 1536 nt16.04■□□□□ 0.16
SAM50P53969 YKL036CYKL036C 393 nt15.72■□□□□ 0.11
SAM50P53969 SRX1YKL086W 384 nt15.05■□□□□ -0
SAM50P53969 Q0297Q0297 156 nt15.02■□□□□ -0
SAM50P53969 YJL027CYJL027C 417 nt14.83□□□□□ -0.04
SAM50P53969 YCR051WYCR051W 669 nt14.26□□□□□ -0.13
SAM50P53969 SCS3YGL126W 1143 nt14.18□□□□□ -0.14
SAM50P53969 DBP2YNL112W 1641 nt14.08□□□□□ -0.15
SAM50P53969 YBR190WYBR190W 312 nt13.75□□□□□ -0.21
SAM50P53969 TRN1tP(UGG)A 72 nt13.74□□□□□ -0.21
SAM50P53969 SUF9tP(UGG)F 72 nt13.74□□□□□ -0.21
SAM50P53969 SUF8tP(UGG)H 72 nt13.74□□□□□ -0.21
SAM50P53969 tP(UGG)LtP(UGG)L 72 nt13.74□□□□□ -0.21
SAM50P53969 SUF7tP(UGG)M 72 nt13.74□□□□□ -0.21
SAM50P53969 tP(UGG)N1tP(UGG)N1 72 nt13.74□□□□□ -0.21
SAM50P53969 tP(UGG)N2tP(UGG)N2 72 nt13.74□□□□□ -0.21
SAM50P53969 tP(UGG)O1tP(UGG)O1 72 nt13.74□□□□□ -0.21
SAM50P53969 SUF11tP(UGG)O2 72 nt13.74□□□□□ -0.21
SAM50P53969 YOL085CYOL085C 342 nt13.59□□□□□ -0.23
SAM50P53969 CCC1YLR220W 969 nt13.56□□□□□ -0.24
SAM50P53969 RPP1BYDL130W 321 nt13.47□□□□□ -0.25
SAM50P53969 RTC3YHR087W 336 nt13.43□□□□□ -0.26
SAM50P53969 PKP1YIL042C 1185 nt13.39□□□□□ -0.27
SAM50P53969 RVS167YDR388W 1449 nt13.28□□□□□ -0.28
SAM50P53969 SCJ1YMR214W 1134 nt13.12□□□□□ -0.31
SAM50P53969 SSA3YBL075C 1950 nt12.92□□□□□ -0.34
SAM50P53969 tP(UGG)O3tP(UGG)O3 72 nt12.91□□□□□ -0.34
SAM50P53969 PET122YER153C 765 nt12.89□□□□□ -0.35
SAM50P53969 SHR5YOL110W 714 nt12.75□□□□□ -0.37
SAM50P53969 SCR1SCR1 522 nt12.73□□□□□ -0.37
SAM50P53969 ATS1YAL020C 1002 nt12.61□□□□□ -0.39
SAM50P53969 PUT4YOR348C 1884 nt12.6□□□□□ -0.39
SAM50P53969 YDJ1YNL064C 1230 nt12.52□□□□□ -0.41
SAM50P53969 URN1YPR152C 1398 nt12.5□□□□□ -0.41
SAM50P53969 RRN5YLR141W 1092 nt12.47□□□□□ -0.41
SAM50P53969 DEP1YAL013W 1218 nt12.41□□□□□ -0.42
SAM50P53969 OPI9YLR338W 858 nt12.37□□□□□ -0.43
SAM50P53969 RPN10YHR200W 807 nt12.32□□□□□ -0.44
SAM50P53969 SAH1YER043C 1350 nt12.31□□□□□ -0.44
SAM50P53969 ARE1YCR048W 1833 nt12.31□□□□□ -0.44
SAM50P53969 GAR1YHR089C 618 nt12.24□□□□□ -0.45
SAM50P53969 YER088W-BYER088W-B 147 nt12.23□□□□□ -0.45
SAM50P53969 YNL208WYNL208W 600 nt12.23□□□□□ -0.45
SAM50P53969 YHR049C-AYHR049C-A 297 nt12.2□□□□□ -0.46
SAM50P53969 RSB1YOR049C 1065 nt12.19□□□□□ -0.46
SAM50P53969 POA1YBR022W 534 nt12.19□□□□□ -0.46
SAM50P53969 PUN1YLR414C 792 nt12.03□□□□□ -0.48
SAM50P53969 BSC6YOL137W 1494 nt11.99□□□□□ -0.49
SAM50P53969 YJR018WYJR018W 363 nt11.92□□□□□ -0.5
SAM50P53969 BUD23YCR047C 828 nt11.89□□□□□ -0.51
SAM50P53969 PTC2YER089C 1395 nt11.88□□□□□ -0.51
SAM50P53969 TIR1YER011W 765 nt11.85□□□□□ -0.51
SAM50P53969 NAB2YGL122C 1578 nt11.75□□□□□ -0.53
SAM50P53969 SSA1YAL005C 1929 nt11.72□□□□□ -0.53
SAM50P53969 PST2YDR032C 597 nt11.7□□□□□ -0.54
SAM50P53969 YJR120WYJR120W 351 nt11.66□□□□□ -0.54
SAM50P53969 RPP2BYDR382W 333 nt11.65□□□□□ -0.54
SAM50P53969 FIS1YIL065C 468 nt11.59□□□□□ -0.55
SAM50P53969 DAL1YIR027C 1383 nt11.58□□□□□ -0.56
SAM50P53969 FPS1YLL043W 2010 nt11.56□□□□□ -0.56
SAM50P53969 FPR4YLR449W 1179 nt11.53□□□□□ -0.56
SAM50P53969 INM2YDR287W 879 nt11.52□□□□□ -0.57
SAM50P53969 SPT5YML010W 3192 nt11.47□□□□□ -0.57
SAM50P53969 PHO4YFR034C 939 nt11.47□□□□□ -0.57
SAM50P53969 SRB2YHR041C 633 nt11.46□□□□□ -0.57
SAM50P53969 YBL100CYBL100C 315 nt11.38□□□□□ -0.59
SAM50P53969 NVJ2YPR091C 2313 nt11.38□□□□□ -0.59
SAM50P53969 BDH2YAL061W 1254 nt11.36□□□□□ -0.59
SAM50P53969 YPS1YLR120C 1710 nt11.29□□□□□ -0.6
SAM50P53969 SHU1YHL006C 453 nt11.28□□□□□ -0.6
SAM50P53969 MEP2YNL142W 1500 nt11.27□□□□□ -0.61
SAM50P53969 WWM1YFL010C 636 nt11.27□□□□□ -0.61
SAM50P53969 FUN26YAL022C 1554 nt11.23□□□□□ -0.61
SAM50P53969 YDR095CYDR095C 411 nt11.22□□□□□ -0.61
SAM50P53969 SSA4YER103W 1929 nt11.21□□□□□ -0.61
SAM50P53969 YGR021WYGR021W 873 nt11.21□□□□□ -0.61
SAM50P53969 PAC11YDR488C 1602 nt11.2□□□□□ -0.62
SAM50P53969 YHR165W-AYHR165W-A 312 nt11.2□□□□□ -0.62
SAM50P53969 YKL097CYKL097C 411 nt11.17□□□□□ -0.62
SAM50P53969 LSM3YLR438C-A 270 nt11.17□□□□□ -0.62
SAM50P53969 TRM9YML014W 840 nt11.17□□□□□ -0.62
SAM50P53969 YFL021C-AYFL021C-A 855 nt11.15□□□□□ -0.62
SAM50P53969 YAL037C-BYAL037C-B 975 nt11.14□□□□□ -0.63
SAM50P53969 ALF1YNL148C 765 nt11.14□□□□□ -0.63
SAM50P53969 HOM6YJR139C 1080 nt11.12□□□□□ -0.63
SAM50P53969 CCT6YDR188W 1641 nt11.07□□□□□ -0.64
SAM50P53969 DCW1YKL046C 1350 nt11.06□□□□□ -0.64
SAM50P53969 MNP1YGL068W 585 nt11.03□□□□□ -0.64
SAM50P53969 SUF2tP(AGG)C 72 nt11.03□□□□□ -0.64
SAM50P53969 SUF10tP(AGG)N 72 nt11.03□□□□□ -0.64
SAM50P53969 RPP2AYOL039W 321 nt11.01□□□□□ -0.65
SAM50P53969 RKM5YLR137W 1104 nt10.96□□□□□ -0.65
SAM50P53969 EMI2YDR516C 1503 nt10.95□□□□□ -0.66
SAM50P53969 PTP1YDL230W 1008 nt10.94□□□□□ -0.66
SAM50P53969 SIS1YNL007C 1059 nt10.94□□□□□ -0.66
SAM50P53969 YMR090WYMR090W 684 nt10.93□□□□□ -0.66
SAM50P53969 CAC2YML102W 1407 nt10.87□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms