RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C RIB5P38145 238 aa3.27□□□□□ -1.89
SSO2YMR183C ECM8P38246 354 aa3.27□□□□□ -1.89
SSO2YMR183C MDM31P38880 579 aa3.27□□□□□ -1.89
SSO2YMR183C IKS1P47042 667 aa3.27□□□□□ -1.89
SSO2YMR183C YGL159WP53110 370 aa3.27□□□□□ -1.89
SSO2YMR183C PEX31P53203 462 aa3.27□□□□□ -1.89
SSO2YMR183C RTC4P53850 401 aa3.27□□□□□ -1.89
SSO2YMR183C YNL095CP53932 642 aa3.27□□□□□ -1.89
SSO2YMR183C MRS2Q01926 470 aa3.27□□□□□ -1.89
SSO2YMR183C EBS1Q03466 884 aaKnown RBP3.27□□□□□ -1.89
SSO2YMR183C PRM6Q04705 352 aa3.27□□□□□ -1.89
SSO2YMR183C YDL144CQ07589 356 aa3.27□□□□□ -1.89
SSO2YMR183C JLP1Q12358 412 aa3.27□□□□□ -1.89
SSO2YMR183C RPN6Q12377 434 aa3.27□□□□□ -1.89
SSO2YMR183C TFC7Q12415 435 aa3.27□□□□□ -1.89
SSO2YMR183C TY2B-LR1P0C2J3 1770 aa3.27□□□□□ -1.89
SSO2YMR183C TY2B-FP0CX63 1770 aa3.27□□□□□ -1.89
SSO2YMR183C TY2B-GR2P0CX64 1770 aa3.27□□□□□ -1.89
SSO2YMR183C TY2B-CP25384 1770 aa3.27□□□□□ -1.89
SSO2YMR183C TY2B-DR2Q03494 1770 aa3.27□□□□□ -1.89
SSO2YMR183C TY1B-DR1Q03855 1755 aa3.27□□□□□ -1.89
SSO2YMR183C TY2B-DR3Q07791 1770 aaKnown RBP3.27□□□□□ -1.89
SSO2YMR183C TY2B-OR1Q12113 1770 aa3.27□□□□□ -1.89
SSO2YMR183C TY2B-DR1Q12472 1770 aa3.27□□□□□ -1.89
SSO2YMR183C TY2B-OR2Q12501 1770 aa3.27□□□□□ -1.89
SSO2YMR183C RPL28P02406 149 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C PIS1P06197 220 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C RPL20AP0CX23 172 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C RPL20BP0CX24 172 aaPredicted RBP3.26□□□□□ -1.89
SSO2YMR183C DPB2P24482 689 aaPredicted RBP3.26□□□□□ -1.89
SSO2YMR183C YCR022CP25620 114 aa3.26□□□□□ -1.89
SSO2YMR183C RFA3P26755 122 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C INO2P26798 304 aa3.26□□□□□ -1.89
SSO2YMR183C AGA1P32323 725 aa3.26□□□□□ -1.89
SSO2YMR183C QRI5P32344 111 aa3.26□□□□□ -1.89
SSO2YMR183C SSO1P32867 290 aa3.26□□□□□ -1.89
SSO2YMR183C YOX1P34161 385 aa3.26□□□□□ -1.89
SSO2YMR183C AVT5P38176 459 aa3.26□□□□□ -1.89
SSO2YMR183C IKI1P38874 309 aa3.26□□□□□ -1.89
SSO2YMR183C SHC1P39000 512 aa3.26□□□□□ -1.89
SSO2YMR183C FRT2P39734 528 aa3.26□□□□□ -1.89
SSO2YMR183C SMB1P40018 196 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C ALG8P40351 577 aa3.26□□□□□ -1.89
SSO2YMR183C OST1P41543 476 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C LCB3P47013 409 aa3.26□□□□□ -1.89
SSO2YMR183C ADO1P47143 340 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C UBC13P52490 153 aa3.26□□□□□ -1.89
SSO2YMR183C NIF3P53081 288 aa3.26□□□□□ -1.89
SSO2YMR183C VHT1P53241 593 aa3.26□□□□□ -1.89
SSO2YMR183C SSU72P53538 206 aaPredicted RBP3.26□□□□□ -1.89
SSO2YMR183C YNL040WP53960 456 aaPredicted RBP3.26□□□□□ -1.89
SSO2YMR183C PEX10Q05568 337 aa3.26□□□□□ -1.89
SSO2YMR183C ARC18Q05933 178 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C MHR1Q06630 226 aa3.26□□□□□ -1.89
SSO2YMR183C SME1Q12330 94 aaPredicted RBP3.26□□□□□ -1.89
SSO2YMR183C EAF3Q12432 401 aa3.26□□□□□ -1.89
SSO2YMR183C HTZ1Q12692 134 aaKnown RBP3.26□□□□□ -1.89
SSO2YMR183C MMS1Q06211 1407 aa3.26□□□□□ -1.89
SSO2YMR183C STH1P32597 1359 aa3.25□□□□□ -1.89
SSO2YMR183C SAL1D6W196 494 aa3.25□□□□□ -1.89
SSO2YMR183C DEP1P31385 405 aa3.25□□□□□ -1.89
SSO2YMR183C PHA2P32452 334 aa3.25□□□□□ -1.89
SSO2YMR183C UBC6P33296 250 aaPredicted RBP3.25□□□□□ -1.89
SSO2YMR183C SPO23P33757 523 aa3.25□□□□□ -1.89
SSO2YMR183C YKL187CP34231 750 aa3.25□□□□□ -1.89
SSO2YMR183C YBR137WP38276 179 aa3.25□□□□□ -1.89
SSO2YMR183C FZO1P38297 855 aa3.25□□□□□ -1.89
SSO2YMR183C NDT80P38830 627 aa3.25□□□□□ -1.89
SSO2YMR183C SOP4P39543 234 aaPredicted RBP3.25□□□□□ -1.89
SSO2YMR183C PRE6P40303 254 aaKnown RBP3.25□□□□□ -1.89
SSO2YMR183C YIL029CP40538 142 aa3.25□□□□□ -1.89
SSO2YMR183C IBA57P47158 497 aa3.25□□□□□ -1.89
SSO2YMR183C SLX9P53251 210 aaPredicted RBP3.25□□□□□ -1.89
SSO2YMR183C MAL13P53338 473 aa3.25□□□□□ -1.89
SSO2YMR183C SKI8Q02793 397 aaPredicted RBP3.25□□□□□ -1.89
SSO2YMR183C TRM82Q03774 444 aa3.25□□□□□ -1.89
SSO2YMR183C TAZ1Q06510 381 aa3.25□□□□□ -1.89
SSO2YMR183C TLG2Q08144 397 aa3.25□□□□□ -1.89
SSO2YMR183C YDL109CQ12103 647 aa3.25□□□□□ -1.89
SSO2YMR183C YCT1Q12235 531 aa3.25□□□□□ -1.89
SSO2YMR183C SNU23Q12368 194 aaPredicted RBP3.25□□□□□ -1.89
SSO2YMR183C RPL15AP05748 204 aaKnown RBP3.24□□□□□ -1.89
SSO2YMR183C RPL23AP0CX41 137 aaKnown RBP3.24□□□□□ -1.89
SSO2YMR183C RPL23BP0CX42 137 aaKnown RBP3.24□□□□□ -1.89
SSO2YMR183C CDC10P25342 322 aaKnown RBP3.24□□□□□ -1.89
SSO2YMR183C HOM6P31116 359 aaKnown RBP3.24□□□□□ -1.89
SSO2YMR183C PDC2P32896 925 aa3.24□□□□□ -1.89
SSO2YMR183C PRX1P34227 261 aaKnown RBP3.24□□□□□ -1.89
SSO2YMR183C KTI12P34253 313 aaKnown RBP3.24□□□□□ -1.89
SSO2YMR183C ATG12P38316 186 aa3.24□□□□□ -1.89
SSO2YMR183C RPH1P39956 796 aa3.24□□□□□ -1.89
SSO2YMR183C MGA1P53050 456 aa3.24□□□□□ -1.89
SSO2YMR183C VAC7P53950 1165 aa3.24□□□□□ -1.89
SSO2YMR183C RNY1Q02933 434 aaKnown RBP3.24□□□□□ -1.89
SSO2YMR183C DPP1Q05521 289 aa3.24□□□□□ -1.89
SSO2YMR183C HEM25Q07534 307 aa3.24□□□□□ -1.89
SSO2YMR183C SLM3Q12093 417 aa3.24□□□□□ -1.89
SSO2YMR183C FRE8Q12209 686 aa3.24□□□□□ -1.89
SSO2YMR183C DCN1Q12395 269 aa3.24□□□□□ -1.89
SSO2YMR183C TY1B-HO13535 1793 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms