Protein–RNA interactions for Protein: P02406

RPL28, 60S ribosomal protein L28, yeastyeast

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL28P02406 NSR1YGR159C 1245 nt14.2□□□□□ -0.14
RPL28P02406 YML009W-BYML009W-B 477 nt13.78□□□□□ -0.2
RPL28P02406 NOP1YDL014W 984 nt13.22□□□□□ -0.29
RPL28P02406 MDJ1YFL016C 1536 nt13.05□□□□□ -0.32
RPL28P02406 YJL027CYJL027C 417 nt12□□□□□ -0.49
RPL28P02406 YKL036CYKL036C 393 nt11.72□□□□□ -0.53
RPL28P02406 SRX1YKL086W 384 nt11.57□□□□□ -0.56
RPL28P02406 Q0297Q0297 156 nt11.44□□□□□ -0.58
RPL28P02406 DBP2YNL112W 1641 nt11.38□□□□□ -0.59
RPL28P02406 YBR190WYBR190W 312 nt11.31□□□□□ -0.6
RPL28P02406 SSA3YBL075C 1950 nt11.24□□□□□ -0.61
RPL28P02406 RTC3YHR087W 336 nt10.93□□□□□ -0.66
RPL28P02406 YCR051WYCR051W 669 nt10.86□□□□□ -0.67
RPL28P02406 TRN1tP(UGG)A 72 nt10.79□□□□□ -0.68
RPL28P02406 SUF9tP(UGG)F 72 nt10.79□□□□□ -0.68
RPL28P02406 SUF8tP(UGG)H 72 nt10.79□□□□□ -0.68
RPL28P02406 tP(UGG)LtP(UGG)L 72 nt10.79□□□□□ -0.68
RPL28P02406 SUF7tP(UGG)M 72 nt10.79□□□□□ -0.68
RPL28P02406 tP(UGG)N1tP(UGG)N1 72 nt10.79□□□□□ -0.68
RPL28P02406 tP(UGG)N2tP(UGG)N2 72 nt10.79□□□□□ -0.68
RPL28P02406 tP(UGG)O1tP(UGG)O1 72 nt10.79□□□□□ -0.68
RPL28P02406 SUF11tP(UGG)O2 72 nt10.79□□□□□ -0.68
RPL28P02406 PUT4YOR348C 1884 nt10.67□□□□□ -0.7
RPL28P02406 RVS167YDR388W 1449 nt10.56□□□□□ -0.72
RPL28P02406 CCC1YLR220W 969 nt10.54□□□□□ -0.72
RPL28P02406 Q0182Q0182 405 nt10.45□□□□□ -0.74
RPL28P02406 SCJ1YMR214W 1134 nt10.43□□□□□ -0.74
RPL28P02406 SCS3YGL126W 1143 nt10.4□□□□□ -0.74
RPL28P02406 ARE1YCR048W 1833 nt10.3□□□□□ -0.76
RPL28P02406 RPP1BYDL130W 321 nt10.24□□□□□ -0.77
RPL28P02406 POA1YBR022W 534 nt10.22□□□□□ -0.77
RPL28P02406 SSA1YAL005C 1929 nt10.21□□□□□ -0.78
RPL28P02406 YHR049C-AYHR049C-A 297 nt10.16□□□□□ -0.78
RPL28P02406 YOL085CYOL085C 342 nt10.16□□□□□ -0.78
RPL28P02406 SPT5YML010W 3192 nt10.14□□□□□ -0.79
RPL28P02406 BSC6YOL137W 1494 nt10.14□□□□□ -0.79
RPL28P02406 SAH1YER043C 1350 nt10.11□□□□□ -0.79
RPL28P02406 OPI9YLR338W 858 nt10.1□□□□□ -0.79
RPL28P02406 SHR5YOL110W 714 nt10.09□□□□□ -0.79
RPL28P02406 URN1YPR152C 1398 nt10.09□□□□□ -0.79
RPL28P02406 tP(UGG)O3tP(UGG)O3 72 nt10□□□□□ -0.81
RPL28P02406 PKP1YIL042C 1185 nt10□□□□□ -0.81
RPL28P02406 SSA4YER103W 1929 nt9.99□□□□□ -0.81
RPL28P02406 DEP1YAL013W 1218 nt9.89□□□□□ -0.83
RPL28P02406 RPN10YHR200W 807 nt9.86□□□□□ -0.83
RPL28P02406 PET122YER153C 765 nt9.83□□□□□ -0.84
RPL28P02406 BUD23YCR047C 828 nt9.82□□□□□ -0.84
RPL28P02406 FPS1YLL043W 2010 nt9.82□□□□□ -0.84
RPL28P02406 PUN1YLR414C 792 nt9.8□□□□□ -0.84
RPL28P02406 YNL208WYNL208W 600 nt9.75□□□□□ -0.85
RPL28P02406 YDJ1YNL064C 1230 nt9.71□□□□□ -0.86
RPL28P02406 PTC2YER089C 1395 nt9.71□□□□□ -0.86
RPL28P02406 NAB2YGL122C 1578 nt9.69□□□□□ -0.86
RPL28P02406 BDF1YLR399C 2061 nt9.68□□□□□ -0.86
RPL28P02406 YJR018WYJR018W 363 nt9.6□□□□□ -0.87
RPL28P02406 MEP2YNL142W 1500 nt9.6□□□□□ -0.87
RPL28P02406 SCR1SCR1 522 nt9.57□□□□□ -0.88
RPL28P02406 TAT1YBR069C 1860 nt9.57□□□□□ -0.88
RPL28P02406 MOT3YMR070W 1473 nt9.56□□□□□ -0.88
RPL28P02406 FIS1YIL065C 468 nt9.55□□□□□ -0.88
RPL28P02406 GAR1YHR089C 618 nt9.5□□□□□ -0.89
RPL28P02406 NVJ2YPR091C 2313 nt9.49□□□□□ -0.89
RPL28P02406 DAL1YIR027C 1383 nt9.48□□□□□ -0.89
RPL28P02406 RRN5YLR141W 1092 nt9.47□□□□□ -0.89
RPL28P02406 DCW1YKL046C 1350 nt9.4□□□□□ -0.9
RPL28P02406 YPS1YLR120C 1710 nt9.4□□□□□ -0.9
RPL28P02406 YJR120WYJR120W 351 nt9.4□□□□□ -0.9
RPL28P02406 PHO4YFR034C 939 nt9.39□□□□□ -0.91
RPL28P02406 PAC11YDR488C 1602 nt9.38□□□□□ -0.91
RPL28P02406 INM2YDR287W 879 nt9.34□□□□□ -0.91
RPL28P02406 FPR4YLR449W 1179 nt9.34□□□□□ -0.91
RPL28P02406 YBR220CYBR220C 1683 nt9.3□□□□□ -0.92
RPL28P02406 YER088W-BYER088W-B 147 nt9.3□□□□□ -0.92
RPL28P02406 EMI2YDR516C 1503 nt9.28□□□□□ -0.92
RPL28P02406 YDR095CYDR095C 411 nt9.28□□□□□ -0.92
RPL28P02406 YHR165W-AYHR165W-A 312 nt9.27□□□□□ -0.93
RPL28P02406 RPP2BYDR382W 333 nt9.26□□□□□ -0.93
RPL28P02406 RPM1RPM1 483 nt9.25□□□□□ -0.93
RPL28P02406 YMR090WYMR090W 684 nt9.25□□□□□ -0.93
RPL28P02406 YJL225CYJL225C 5277 nt9.24□□□□□ -0.93
RPL28P02406 TIR1YER011W 765 nt9.24□□□□□ -0.93
RPL28P02406 YDL221WYDL221W 552 nt9.19□□□□□ -0.94
RPL28P02406 SDH1YKL148C 1923 nt9.17□□□□□ -0.94
RPL28P02406 ATS1YAL020C 1002 nt9.15□□□□□ -0.94
RPL28P02406 YBL100CYBL100C 315 nt9.15□□□□□ -0.94
RPL28P02406 PTP1YDL230W 1008 nt9.11□□□□□ -0.95
RPL28P02406 RSB1YOR049C 1065 nt9.11□□□□□ -0.95
RPL28P02406 CAC2YML102W 1407 nt9.1□□□□□ -0.95
RPL28P02406 PCH2YBR186W 1695 nt9.08□□□□□ -0.96
RPL28P02406 SEC11YIR022W 504 nt9.07□□□□□ -0.96
RPL28P02406 RPP2AYOL039W 321 nt9.07□□□□□ -0.96
RPL28P02406 GUT2YIL155C 1950 nt9.06□□□□□ -0.96
RPL28P02406 FUN26YAL022C 1554 nt9.03□□□□□ -0.96
RPL28P02406 SCC4YER147C 1875 nt9.02□□□□□ -0.96
RPL28P02406 RDN37-1RDN37-1 5354 nt9.02□□□□□ -0.96
RPL28P02406 RDN37-2RDN37-2 5354 nt9.02□□□□□ -0.96
RPL28P02406 BDH2YAL061W 1254 nt9.02□□□□□ -0.97
RPL28P02406 IRC15YPL017C 1500 nt8.99□□□□□ -0.97
RPL28P02406 SRB2YHR041C 633 nt8.98□□□□□ -0.97
RPL28P02406 ALF1YNL148C 765 nt8.98□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms