Protein–RNA interactions for Protein: P47013

LCB3, Dihydrosphingosine 1-phosphate phosphatase LCB3, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB3P47013 NSR1YGR159C 1245 nt15.75■□□□□ 0.11
LCB3P47013 YML009W-BYML009W-B 477 nt15.67■□□□□ 0.1
LCB3P47013 NOP1YDL014W 984 nt15.15■□□□□ 0.02
LCB3P47013 MDJ1YFL016C 1536 nt14.18□□□□□ -0.14
LCB3P47013 YKL036CYKL036C 393 nt13.82□□□□□ -0.2
LCB3P47013 SRX1YKL086W 384 nt13.26□□□□□ -0.29
LCB3P47013 Q0297Q0297 156 nt13.24□□□□□ -0.29
LCB3P47013 YJL027CYJL027C 417 nt13.04□□□□□ -0.32
LCB3P47013 YCR051WYCR051W 669 nt12.55□□□□□ -0.4
LCB3P47013 SCS3YGL126W 1143 nt12.5□□□□□ -0.41
LCB3P47013 DBP2YNL112W 1641 nt12.5□□□□□ -0.41
LCB3P47013 YBR190WYBR190W 312 nt12.13□□□□□ -0.47
LCB3P47013 TRN1tP(UGG)A 72 nt12.11□□□□□ -0.47
LCB3P47013 SUF9tP(UGG)F 72 nt12.11□□□□□ -0.47
LCB3P47013 SUF8tP(UGG)H 72 nt12.11□□□□□ -0.47
LCB3P47013 tP(UGG)LtP(UGG)L 72 nt12.11□□□□□ -0.47
LCB3P47013 SUF7tP(UGG)M 72 nt12.11□□□□□ -0.47
LCB3P47013 tP(UGG)N1tP(UGG)N1 72 nt12.11□□□□□ -0.47
LCB3P47013 tP(UGG)N2tP(UGG)N2 72 nt12.11□□□□□ -0.47
LCB3P47013 tP(UGG)O1tP(UGG)O1 72 nt12.11□□□□□ -0.47
LCB3P47013 SUF11tP(UGG)O2 72 nt12.11□□□□□ -0.47
LCB3P47013 YOL085CYOL085C 342 nt12□□□□□ -0.49
LCB3P47013 CCC1YLR220W 969 nt11.96□□□□□ -0.49
LCB3P47013 RPP1BYDL130W 321 nt11.87□□□□□ -0.51
LCB3P47013 PKP1YIL042C 1185 nt11.84□□□□□ -0.51
LCB3P47013 RTC3YHR087W 336 nt11.82□□□□□ -0.52
LCB3P47013 SSA3YBL075C 1950 nt11.67□□□□□ -0.54
LCB3P47013 RVS167YDR388W 1449 nt11.63□□□□□ -0.55
LCB3P47013 SCJ1YMR214W 1134 nt11.6□□□□□ -0.55
LCB3P47013 tP(UGG)O3tP(UGG)O3 72 nt11.39□□□□□ -0.59
LCB3P47013 PET122YER153C 765 nt11.37□□□□□ -0.59
LCB3P47013 SHR5YOL110W 714 nt11.21□□□□□ -0.61
LCB3P47013 PUT4YOR348C 1884 nt11.19□□□□□ -0.62
LCB3P47013 SCR1SCR1 522 nt11.15□□□□□ -0.62
LCB3P47013 ATS1YAL020C 1002 nt11.13□□□□□ -0.63
LCB3P47013 RRN5YLR141W 1092 nt11.03□□□□□ -0.64
LCB3P47013 YDJ1YNL064C 1230 nt11.02□□□□□ -0.65
LCB3P47013 URN1YPR152C 1398 nt11.02□□□□□ -0.65
LCB3P47013 DEP1YAL013W 1218 nt10.96□□□□□ -0.65
LCB3P47013 ARE1YCR048W 1833 nt10.93□□□□□ -0.66
LCB3P47013 OPI9YLR338W 858 nt10.91□□□□□ -0.66
LCB3P47013 SAH1YER043C 1350 nt10.89□□□□□ -0.67
LCB3P47013 YER088W-BYER088W-B 147 nt10.81□□□□□ -0.68
LCB3P47013 GAR1YHR089C 618 nt10.8□□□□□ -0.68
LCB3P47013 POA1YBR022W 534 nt10.8□□□□□ -0.68
LCB3P47013 RPN10YHR200W 807 nt10.77□□□□□ -0.69
LCB3P47013 YNL208WYNL208W 600 nt10.76□□□□□ -0.69
LCB3P47013 YHR049C-AYHR049C-A 297 nt10.75□□□□□ -0.69
LCB3P47013 RSB1YOR049C 1065 nt10.71□□□□□ -0.69
LCB3P47013 BSC6YOL137W 1494 nt10.61□□□□□ -0.71
LCB3P47013 PUN1YLR414C 792 nt10.57□□□□□ -0.72
LCB3P47013 YJR018WYJR018W 363 nt10.49□□□□□ -0.73
LCB3P47013 PTC2YER089C 1395 nt10.49□□□□□ -0.73
LCB3P47013 BUD23YCR047C 828 nt10.47□□□□□ -0.73
LCB3P47013 TIR1YER011W 765 nt10.45□□□□□ -0.74
LCB3P47013 SSA1YAL005C 1929 nt10.39□□□□□ -0.75
LCB3P47013 NAB2YGL122C 1578 nt10.36□□□□□ -0.75
LCB3P47013 YJR120WYJR120W 351 nt10.36□□□□□ -0.75
LCB3P47013 PST2YDR032C 597 nt10.35□□□□□ -0.75
LCB3P47013 SPT5YML010W 3192 nt10.31□□□□□ -0.76
LCB3P47013 Q0182Q0182 405 nt10.27□□□□□ -0.77
LCB3P47013 FIS1YIL065C 468 nt10.23□□□□□ -0.77
LCB3P47013 SRB2YHR041C 633 nt10.22□□□□□ -0.77
LCB3P47013 RPP2BYDR382W 333 nt10.2□□□□□ -0.78
LCB3P47013 DAL1YIR027C 1383 nt10.2□□□□□ -0.78
LCB3P47013 INM2YDR287W 879 nt10.14□□□□□ -0.79
LCB3P47013 FPR4YLR449W 1179 nt10.14□□□□□ -0.79
LCB3P47013 PHO4YFR034C 939 nt10.11□□□□□ -0.79
LCB3P47013 YBL100CYBL100C 315 nt10.01□□□□□ -0.81
LCB3P47013 BDH2YAL061W 1254 nt10□□□□□ -0.81
LCB3P47013 YPS1YLR120C 1710 nt9.99□□□□□ -0.81
LCB3P47013 SHU1YHL006C 453 nt9.98□□□□□ -0.81
LCB3P47013 FPS1YLL043W 2010 nt9.98□□□□□ -0.81
LCB3P47013 SSA4YER103W 1929 nt9.97□□□□□ -0.81
LCB3P47013 MEP2YNL142W 1500 nt9.97□□□□□ -0.81
LCB3P47013 WWM1YFL010C 636 nt9.97□□□□□ -0.81
LCB3P47013 PAC11YDR488C 1602 nt9.91□□□□□ -0.82
LCB3P47013 NVJ2YPR091C 2313 nt9.9□□□□□ -0.82
LCB3P47013 FUN26YAL022C 1554 nt9.9□□□□□ -0.82
LCB3P47013 YDR095CYDR095C 411 nt9.9□□□□□ -0.82
LCB3P47013 YAL037C-BYAL037C-B 975 nt9.87□□□□□ -0.83
LCB3P47013 YHR165W-AYHR165W-A 312 nt9.86□□□□□ -0.83
LCB3P47013 LSM3YLR438C-A 270 nt9.83□□□□□ -0.84
LCB3P47013 TRM9YML014W 840 nt9.83□□□□□ -0.84
LCB3P47013 DCW1YKL046C 1350 nt9.83□□□□□ -0.84
LCB3P47013 YGR021WYGR021W 873 nt9.82□□□□□ -0.84
LCB3P47013 HOM6YJR139C 1080 nt9.81□□□□□ -0.84
LCB3P47013 YKL097CYKL097C 411 nt9.81□□□□□ -0.84
LCB3P47013 YFL021C-AYFL021C-A 855 nt9.79□□□□□ -0.84
LCB3P47013 MOT3YMR070W 1473 nt9.77□□□□□ -0.85
LCB3P47013 CCT6YDR188W 1641 nt9.76□□□□□ -0.85
LCB3P47013 ALF1YNL148C 765 nt9.76□□□□□ -0.85
LCB3P47013 MNP1YGL068W 585 nt9.74□□□□□ -0.85
LCB3P47013 PTP1YDL230W 1008 nt9.73□□□□□ -0.85
LCB3P47013 RPP2AYOL039W 321 nt9.7□□□□□ -0.86
LCB3P47013 EMI2YDR516C 1503 nt9.69□□□□□ -0.86
LCB3P47013 CAC2YML102W 1407 nt9.67□□□□□ -0.86
LCB3P47013 RKM5YLR137W 1104 nt9.67□□□□□ -0.86
LCB3P47013 SIS1YNL007C 1059 nt9.67□□□□□ -0.86
LCB3P47013 SUF2tP(AGG)C 72 nt9.66□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms