RNA–Protein interactions for RNA: YPL160W

CDC60, Transcript of Cytosolic leucyl tRNA synthetase, yeastyeast

Gene CDC60, Length 3,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC60YPL160W RRT12P25381 491 aa1.83□□□□□ -2.12
CDC60YPL160W MYO3P36006 1272 aa1.83□□□□□ -2.12
CDC60YPL160W YBR137WP38276 179 aa1.83□□□□□ -2.12
CDC60YPL160W BIG1P38813 335 aa1.83□□□□□ -2.12
CDC60YPL160W VAB2P40003 282 aa1.83□□□□□ -2.12
CDC60YPL160W GIM4P40005 111 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W FMC1P40491 155 aa1.83□□□□□ -2.12
CDC60YPL160W YRB2P40517 327 aa1.83□□□□□ -2.12
CDC60YPL160W YGR210CP42942 411 aa1.83□□□□□ -2.12
CDC60YPL160W YJL043WP47053 257 aa1.83□□□□□ -2.12
CDC60YPL160W HSH155P49955 971 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W FRE4P53746 719 aa1.83□□□□□ -2.12
CDC60YPL160W NOP13P53883 403 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CDC60YPL160W AAT1Q01802 451 aa1.83□□□□□ -2.12
CDC60YPL160W SNX41Q04053 625 aa1.83□□□□□ -2.12
CDC60YPL160W SPC2Q04969 178 aa1.83□□□□□ -2.12
CDC60YPL160W SDO1Q07953 250 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W YLL056CQ12177 298 aa1.83□□□□□ -2.12
CDC60YPL160W LAG2Q92325 660 aa1.83□□□□□ -2.12
CDC60YPL160W LSB5P25369 354 aa1.83□□□□□ -2.12
CDC60YPL160W AIM29P36154 155 aa1.83□□□□□ -2.12
CDC60YPL160W NAT2P37293 288 aa1.83□□□□□ -2.12
CDC60YPL160W PRS4P38063 326 aaPredicted RBP1.83□□□□□ -2.12
CDC60YPL160W DTR1P38125 572 aa1.83□□□□□ -2.12
CDC60YPL160W PAC2P39937 518 aa1.83□□□□□ -2.12
CDC60YPL160W APS3P47064 194 aa1.83□□□□□ -2.12
CDC60YPL160W JHD2P47156 728 aaPredicted RBP1.83□□□□□ -2.12
CDC60YPL160W HMS2P47175 358 aa1.83□□□□□ -2.12
CDC60YPL160W TAF6P53040 516 aa1.83□□□□□ -2.12
CDC60YPL160W COS6P53344 381 aa1.83□□□□□ -2.12
CDC60YPL160W HHO1P53551 258 aa1.83□□□□□ -2.12
CDC60YPL160W MRPL50P53724 139 aa1.83□□□□□ -2.12
CDC60YPL160W YNR048WP53740 393 aa1.83□□□□□ -2.12
CDC60YPL160W VAC7P53950 1165 aa1.83□□□□□ -2.12
CDC60YPL160W HXT11P54862 567 aa1.83□□□□□ -2.12
CDC60YPL160W IVY1Q04934 453 aa1.83□□□□□ -2.12
CDC60YPL160W SSK1Q07084 712 aa1.83□□□□□ -2.12
CDC60YPL160W YDL144CQ07589 356 aa1.83□□□□□ -2.12
CDC60YPL160W SNU23Q12368 194 aaPredicted RBP1.83□□□□□ -2.12
CDC60YPL160W YHR213W-AQ8TGT4 77 aa1.83□□□□□ -2.12
CDC60YPL160W HIS4P00815 799 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W PAB1P04147 577 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CDC60YPL160W RPL24AP04449 155 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W ARF1P11076 181 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W YCR016WP25617 290 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W SEC1P30619 724 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W MKK1P32490 508 aa1.83□□□□□ -2.12
CDC60YPL160W PHD1P36093 366 aa1.83□□□□□ -2.12
CDC60YPL160W VPS52P39904 641 aa1.83□□□□□ -2.12
CDC60YPL160W YEL020CP39994 560 aa1.83□□□□□ -2.12
CDC60YPL160W ISC1P40015 477 aaKnown RBP1.83□□□□□ -2.12
CDC60YPL160W MRX5P47007 382 aa1.83□□□□□ -2.12
CDC60YPL160W YGL082WP53155 381 aa1.83□□□□□ -2.12
CDC60YPL160W LST7P53237 242 aa1.83□□□□□ -2.12
CDC60YPL160W YMR209CQ03648 457 aa1.83□□□□□ -2.12
CDC60YPL160W CSM3Q04659 317 aa1.83□□□□□ -2.12
CDC60YPL160W GAL83Q04739 417 aa1.83□□□□□ -2.12
CDC60YPL160W YLR112WQ12130 139 aa1.83□□□□□ -2.12
CDC60YPL160W YOR214CQ12282 236 aa1.83□□□□□ -2.12
CDC60YPL160W CMC2Q3E7A4 109 aa1.83□□□□□ -2.12
CDC60YPL160W HIS3P06633 220 aa1.82□□□□□ -2.12
CDC60YPL160W RHO1P06780 209 aaKnown RBP1.82□□□□□ -2.12
CDC60YPL160W MRPL8P22353 238 aa1.82□□□□□ -2.12
CDC60YPL160W CMK2P22517 447 aa1.82□□□□□ -2.12
CDC60YPL160W YCR041WP37265 110 aa1.82□□□□□ -2.12
CDC60YPL160W FMP23P38231 175 aa1.82□□□□□ -2.12
CDC60YPL160W URA8P38627 578 aaPredicted RBP1.82□□□□□ -2.12
CDC60YPL160W HIS2P38635 335 aa1.82□□□□□ -2.12
CDC60YPL160W FAA2P39518 744 aa1.82□□□□□ -2.12
CDC60YPL160W COA1P40452 197 aa1.82□□□□□ -2.12
CDC60YPL160W CSM2P40465 213 aa1.82□□□□□ -2.12
CDC60YPL160W CCC1P47818 322 aa1.82□□□□□ -2.12
CDC60YPL160W SAM50P53969 484 aa1.82□□□□□ -2.12
CDC60YPL160W TMA20P89886 181 aaPredicted RBP1.82□□□□□ -2.12
CDC60YPL160W MRP51Q02950 344 aa1.82□□□□□ -2.12
CDC60YPL160W GRS2Q06817 618 aa1.82□□□□□ -2.12
CDC60YPL160W ALE1Q08548 619 aa1.82□□□□□ -2.12
CDC60YPL160W RPN8Q08723 338 aaKnown RBP1.82□□□□□ -2.12
CDC60YPL160W YCL012CQ8J0M4 134 aa1.82□□□□□ -2.12
CDC60YPL160W FUS3P16892 353 aaKnown RBP1.82□□□□□ -2.12
CDC60YPL160W MBR1P23493 339 aa1.82□□□□□ -2.12
CDC60YPL160W EHD3P28817 500 aa1.82□□□□□ -2.12
CDC60YPL160W BMH1P29311 267 aaKnown RBP1.82□□□□□ -2.12
CDC60YPL160W MEI4P29467 408 aa1.82□□□□□ -2.12
CDC60YPL160W UBC6P33296 250 aaPredicted RBP1.82□□□□□ -2.12
CDC60YPL160W YKL187CP34231 750 aa1.82□□□□□ -2.12
CDC60YPL160W CAF4P36130 643 aa1.82□□□□□ -2.12
CDC60YPL160W POP8P38208 133 aa1.82□□□□□ -2.12
CDC60YPL160W LDB7P38210 180 aa1.82□□□□□ -2.12
CDC60YPL160W SMF2P38778 549 aa1.82□□□□□ -2.12
CDC60YPL160W LYS1P38998 373 aaRIP-Chip data1.82□□□□□ -2.12not detected
CDC60YPL160W RPH1P39956 796 aa1.82□□□□□ -2.12
CDC60YPL160W YER186CP40101 306 aa1.82□□□□□ -2.12
CDC60YPL160W GLG2P47011 380 aa1.82□□□□□ -2.12
CDC60YPL160W RTT101P47050 842 aa1.82□□□□□ -2.12
CDC60YPL160W YGR168CP53293 376 aa1.82□□□□□ -2.12
CDC60YPL160W GND2P53319 492 aa1.82□□□□□ -2.12
CDC60YPL160W MTQ1P53944 314 aa1.82□□□□□ -2.12
CDC60YPL160W NUP116Q02630 1113 aa1.82□□□□□ -2.12
CDC60YPL160W VPS74Q06385 345 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms