RNA–Protein interactions for RNA: YPL160W

CDC60, Transcript of Cytosolic leucyl tRNA synthetase, yeastyeast

Gene CDC60, Length 3,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC60YPL160W MTC1P47018 478 aaKnown RBP5.31□□□□□ -1.56
CDC60YPL160W FAP1P53971 965 aa4.85□□□□□ -1.63
CDC60YPL160W DRS1P32892 752 aaKnown RBP4.81□□□□□ -1.64
CDC60YPL160W PRY3P47033 881 aa4.59□□□□□ -1.67
CDC60YPL160W PRI1P10363 409 aa4.58□□□□□ -1.68
CDC60YPL160W YCK3P39962 524 aa4.55□□□□□ -1.68
CDC60YPL160W AAD16Q02895 342 aa4.5□□□□□ -1.69
CDC60YPL160W RPG1P38249 964 aaKnown RBP4.38□□□□□ -1.71
CDC60YPL160W TFA1P36100 482 aa4.36□□□□□ -1.71
CDC60YPL160W ISW2Q08773 1120 aa4.35□□□□□ -1.71
CDC60YPL160W TSR3Q12094 313 aaKnown RBP4.31□□□□□ -1.72
CDC60YPL160W DIP2Q12220 943 aaPredicted RBP4.29□□□□□ -1.72
CDC60YPL160W BFR2Q06631 534 aaKnown RBP4.26□□□□□ -1.73
CDC60YPL160W HAA1Q12753 694 aaKnown RBP4.26□□□□□ -1.73
CDC60YPL160W AVT3P36062 692 aa4.16□□□□□ -1.74
CDC60YPL160W RSE1Q04693 1361 aaKnown RBP4.12□□□□□ -1.75
CDC60YPL160W MRPL32P25348 183 aa4.04□□□□□ -1.76
CDC60YPL160W RPL17AP05740 184 aaKnown RBP4.02□□□□□ -1.77
CDC60YPL160W RPL17BP46990 184 aaKnown RBP4.02□□□□□ -1.77
CDC60YPL160W CDC27P38042 758 aa3.97□□□□□ -1.77
CDC60YPL160W REB1P21538 810 aa3.96□□□□□ -1.77
CDC60YPL160W SPT21P35209 758 aa3.94□□□□□ -1.78
CDC60YPL160W YKR023WP36119 530 aaKnown RBP3.93□□□□□ -1.78
CDC60YPL160W YGL015CP33199 130 aa3.93□□□□□ -1.78
CDC60YPL160W RQC2Q12532 1038 aaKnown RBP3.88□□□□□ -1.79
CDC60YPL160W DCD1P06773 312 aa3.85□□□□□ -1.79
CDC60YPL160W INO80P53115 1489 aa3.82□□□□□ -1.8
CDC60YPL160W HOP09932 586 aa3.82□□□□□ -1.8
CDC60YPL160W MAP2P38174 421 aaKnown RBP3.82□□□□□ -1.8
CDC60YPL160W TFC8Q12308 588 aa3.82□□□□□ -1.8
CDC60YPL160W MON2P48563 1636 aaPredicted RBP3.79□□□□□ -1.8
CDC60YPL160W TAF7Q05021 590 aa3.78□□□□□ -1.8
CDC60YPL160W UBP10P53874 792 aaPredicted RBP3.76□□□□□ -1.81
CDC60YPL160W RIM101P33400 625 aa3.75□□□□□ -1.81
CDC60YPL160W DMA1P38823 416 aa3.71□□□□□ -1.81
CDC60YPL160W BUD31P25337 157 aaPredicted RBP3.71□□□□□ -1.82
CDC60YPL160W BCH2P36122 765 aa3.7□□□□□ -1.82
CDC60YPL160W SCY1P53009 804 aa3.68□□□□□ -1.82
CDC60YPL160W OXP1P28273 1286 aa3.66□□□□□ -1.82
CDC60YPL160W MIF2P35201 549 aa3.65□□□□□ -1.83
CDC60YPL160W TGL3P40308 642 aa3.6□□□□□ -1.83
CDC60YPL160W SLX5P32828 619 aaKnown RBP3.6□□□□□ -1.83
CDC60YPL160W BDF1P35817 686 aa3.58□□□□□ -1.84
CDC60YPL160W LEO1P38439 464 aa3.58□□□□□ -1.84
CDC60YPL160W KOG1P38873 1557 aa3.56□□□□□ -1.84
CDC60YPL160W DNA2P38859 1522 aa3.56□□□□□ -1.84
CDC60YPL160W EPS1P40557 701 aa3.56□□□□□ -1.84
CDC60YPL160W SPA2P23201 1466 aaKnown RBP3.56□□□□□ -1.84
CDC60YPL160W TIF4632P39936 914 aaKnown RBP3.54□□□□□ -1.84
CDC60YPL160W MST1P07236 462 aa3.5□□□□□ -1.85
CDC60YPL160W PTP3P40048 928 aa3.5□□□□□ -1.85
CDC60YPL160W SAS10Q12136 610 aaPredicted RBP3.46□□□□□ -1.86
CDC60YPL160W AI2P03876 854 aa3.45□□□□□ -1.86
CDC60YPL160W RSM7P47150 247 aa3.45□□□□□ -1.86
CDC60YPL160W YLR271WQ06152 274 aa3.45□□□□□ -1.86
CDC60YPL160W YIL055CP40523 627 aaKnown RBP3.45□□□□□ -1.86
CDC60YPL160W YBL029C-AQ3E756 94 aa3.44□□□□□ -1.86
CDC60YPL160W LEU3P08638 886 aa3.44□□□□□ -1.86
CDC60YPL160W YAH1Q12184 172 aaKnown RBP3.44□□□□□ -1.86
CDC60YPL160W UBP9P39967 754 aa3.43□□□□□ -1.86
CDC60YPL160W SIS1P25294 352 aaKnown RBP3.43□□□□□ -1.86
CDC60YPL160W ABP1P15891 592 aaKnown RBP3.42□□□□□ -1.86
CDC60YPL160W NSR1P27476 414 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
CDC60YPL160W SSP1P38871 571 aa3.41□□□□□ -1.86
CDC60YPL160W PSD2P53037 1138 aaKnown RBP3.41□□□□□ -1.86
CDC60YPL160W VNX1P42839 908 aa3.39□□□□□ -1.87
CDC60YPL160W YFR006WP43590 535 aa3.39□□□□□ -1.87
CDC60YPL160W YOR238WQ08634 303 aa3.39□□□□□ -1.87
CDC60YPL160W BBC1P47068 1157 aa3.38□□□□□ -1.87
CDC60YPL160W SWR1Q05471 1514 aa3.36□□□□□ -1.87
CDC60YPL160W YAP5P40574 245 aa3.35□□□□□ -1.87
CDC60YPL160W CST9Q06032 482 aa3.34□□□□□ -1.87
CDC60YPL160W DMA2P53924 522 aa3.34□□□□□ -1.88
CDC60YPL160W MRM1P25270 412 aa3.32□□□□□ -1.88
CDC60YPL160W PIB1Q06651 286 aa3.32□□□□□ -1.88
CDC60YPL160W WSC3Q12215 556 aa3.31□□□□□ -1.88
CDC60YPL160W AIR2Q12476 344 aaKnown RBP3.31□□□□□ -1.88
CDC60YPL160W VPS29P38759 282 aa3.31□□□□□ -1.88
CDC60YPL160W RCR1P38212 213 aa3.3□□□□□ -1.88
CDC60YPL160W SPP1Q03012 353 aa3.3□□□□□ -1.88
CDC60YPL160W IOC2Q12072 812 aa3.3□□□□□ -1.88
CDC60YPL160W STS1P38637 319 aa3.27□□□□□ -1.89
CDC60YPL160W FKH1P40466 484 aa3.27□□□□□ -1.89
CDC60YPL160W TIF11P38912 153 aaKnown RBP3.27□□□□□ -1.89
CDC60YPL160W RPN1P38764 993 aaKnown RBP3.26□□□□□ -1.89
CDC60YPL160W MGA2P40578 1113 aa3.25□□□□□ -1.89
CDC60YPL160W LDB19Q12502 818 aa3.25□□□□□ -1.89
CDC60YPL160W DBP1P24784 617 aaKnown RBP3.24□□□□□ -1.89
CDC60YPL160W IFH1P39520 1085 aa3.24□□□□□ -1.89
CDC60YPL160W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
CDC60YPL160W ULI1P43604 169 aa3.23□□□□□ -1.89
CDC60YPL160W YMR1P47147 688 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
CDC60YPL160W VMA1P17255 1071 aaKnown RBP3.22□□□□□ -1.89
CDC60YPL160W YOL036WQ08206 761 aa3.22□□□□□ -1.89
CDC60YPL160W RLF2Q12495 606 aa3.22□□□□□ -1.89
CDC60YPL160W RTG3P38165 486 aa3.21□□□□□ -1.9
CDC60YPL160W SET4P42948 560 aa3.21□□□□□ -1.9
CDC60YPL160W YPR148CQ06523 435 aa3.21□□□□□ -1.9
CDC60YPL160W TRP5P00931 707 aaKnown RBP3.2□□□□□ -1.9
CDC60YPL160W GTT3P39996 337 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms