Protein–RNA interactions for Protein: P53551

HHO1, Histone H1, yeastyeast

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HHO1P53551 NSR1YGR159C 1245 nt15.82■□□□□ 0.12
HHO1P53551 YML009W-BYML009W-B 477 nt15.2■□□□□ 0.02
HHO1P53551 MDJ1YFL016C 1536 nt14.97□□□□□ -0.01
HHO1P53551 NOP1YDL014W 984 nt14.38□□□□□ -0.11
HHO1P53551 SSA3YBL075C 1950 nt13.87□□□□□ -0.19
HHO1P53551 YJL027CYJL027C 417 nt13.71□□□□□ -0.21
HHO1P53551 YBR190WYBR190W 312 nt12.95□□□□□ -0.34
HHO1P53551 DBP2YNL112W 1641 nt12.8□□□□□ -0.36
HHO1P53551 RTC3YHR087W 336 nt12.69□□□□□ -0.38
HHO1P53551 SRX1YKL086W 384 nt12.52□□□□□ -0.41
HHO1P53551 PUT4YOR348C 1884 nt12.44□□□□□ -0.42
HHO1P53551 YKL036CYKL036C 393 nt12.42□□□□□ -0.42
HHO1P53551 Q0297Q0297 156 nt12.24□□□□□ -0.45
HHO1P53551 SSA4YER103W 1929 nt12.07□□□□□ -0.48
HHO1P53551 POA1YBR022W 534 nt12.02□□□□□ -0.49
HHO1P53551 SPT5YML010W 3192 nt11.94□□□□□ -0.5
HHO1P53551 ARE1YCR048W 1833 nt11.94□□□□□ -0.5
HHO1P53551 BSC6YOL137W 1494 nt11.94□□□□□ -0.5
HHO1P53551 RVS167YDR388W 1449 nt11.9□□□□□ -0.5
HHO1P53551 YCR051WYCR051W 669 nt11.88□□□□□ -0.51
HHO1P53551 TRN1tP(UGG)A 72 nt11.87□□□□□ -0.51
HHO1P53551 SUF9tP(UGG)F 72 nt11.87□□□□□ -0.51
HHO1P53551 SUF8tP(UGG)H 72 nt11.87□□□□□ -0.51
HHO1P53551 tP(UGG)LtP(UGG)L 72 nt11.87□□□□□ -0.51
HHO1P53551 SUF7tP(UGG)M 72 nt11.87□□□□□ -0.51
HHO1P53551 tP(UGG)N1tP(UGG)N1 72 nt11.87□□□□□ -0.51
HHO1P53551 tP(UGG)N2tP(UGG)N2 72 nt11.87□□□□□ -0.51
HHO1P53551 tP(UGG)O1tP(UGG)O1 72 nt11.87□□□□□ -0.51
HHO1P53551 SUF11tP(UGG)O2 72 nt11.87□□□□□ -0.51
HHO1P53551 YHR049C-AYHR049C-A 297 nt11.85□□□□□ -0.51
HHO1P53551 CCC1YLR220W 969 nt11.8□□□□□ -0.52
HHO1P53551 SAH1YER043C 1350 nt11.69□□□□□ -0.54
HHO1P53551 PAC11YDR488C 1602 nt11.66□□□□□ -0.54
HHO1P53551 BDF1YLR399C 2061 nt11.66□□□□□ -0.54
HHO1P53551 SCJ1YMR214W 1134 nt11.64□□□□□ -0.55
HHO1P53551 BUD23YCR047C 828 nt11.53□□□□□ -0.56
HHO1P53551 URN1YPR152C 1398 nt11.52□□□□□ -0.57
HHO1P53551 TAT1YBR069C 1860 nt11.49□□□□□ -0.57
HHO1P53551 OPI9YLR338W 858 nt11.49□□□□□ -0.57
HHO1P53551 NVJ2YPR091C 2313 nt11.31□□□□□ -0.6
HHO1P53551 DEP1YAL013W 1218 nt11.28□□□□□ -0.6
HHO1P53551 MEP2YNL142W 1500 nt11.28□□□□□ -0.6
HHO1P53551 SHR5YOL110W 714 nt11.24□□□□□ -0.61
HHO1P53551 PTC2YER089C 1395 nt11.2□□□□□ -0.62
HHO1P53551 PUN1YLR414C 792 nt11.17□□□□□ -0.62
HHO1P53551 NAB2YGL122C 1578 nt11.16□□□□□ -0.62
HHO1P53551 RPN10YHR200W 807 nt11.14□□□□□ -0.63
HHO1P53551 DCW1YKL046C 1350 nt11.1□□□□□ -0.63
HHO1P53551 YOL085CYOL085C 342 nt11.02□□□□□ -0.65
HHO1P53551 RPP1BYDL130W 321 nt11.01□□□□□ -0.65
HHO1P53551 YBR220CYBR220C 1683 nt11.01□□□□□ -0.65
HHO1P53551 YNL208WYNL208W 600 nt10.96□□□□□ -0.65
HHO1P53551 tP(UGG)O3tP(UGG)O3 72 nt10.94□□□□□ -0.66
HHO1P53551 FIS1YIL065C 468 nt10.93□□□□□ -0.66
HHO1P53551 YMR090WYMR090W 684 nt10.93□□□□□ -0.66
HHO1P53551 EMI2YDR516C 1503 nt10.91□□□□□ -0.66
HHO1P53551 YJR018WYJR018W 363 nt10.91□□□□□ -0.66
HHO1P53551 FPR4YLR449W 1179 nt10.87□□□□□ -0.67
HHO1P53551 YPS1YLR120C 1710 nt10.85□□□□□ -0.67
HHO1P53551 DAL1YIR027C 1383 nt10.85□□□□□ -0.67
HHO1P53551 PCH2YBR186W 1695 nt10.85□□□□□ -0.67
HHO1P53551 YHR165W-AYHR165W-A 312 nt10.84□□□□□ -0.67
HHO1P53551 SCS3YGL126W 1143 nt10.83□□□□□ -0.68
HHO1P53551 GUT2YIL155C 1950 nt10.81□□□□□ -0.68
HHO1P53551 SDH1YKL148C 1923 nt10.79□□□□□ -0.68
HHO1P53551 FPS1YLL043W 2010 nt10.79□□□□□ -0.68
HHO1P53551 PHO4YFR034C 939 nt10.76□□□□□ -0.69
HHO1P53551 PKP1YIL042C 1185 nt10.76□□□□□ -0.69
HHO1P53551 YDL221WYDL221W 552 nt10.75□□□□□ -0.69
HHO1P53551 SEC11YIR022W 504 nt10.75□□□□□ -0.69
HHO1P53551 PET122YER153C 765 nt10.65□□□□□ -0.7
HHO1P53551 YDR095CYDR095C 411 nt10.64□□□□□ -0.71
HHO1P53551 INM2YDR287W 879 nt10.62□□□□□ -0.71
HHO1P53551 SCC4YER147C 1875 nt10.59□□□□□ -0.71
HHO1P53551 CAC2YML102W 1407 nt10.58□□□□□ -0.72
HHO1P53551 YDJ1YNL064C 1230 nt10.57□□□□□ -0.72
HHO1P53551 PIB2YGL023C 1908 nt10.56□□□□□ -0.72
HHO1P53551 GAR1YHR089C 618 nt10.53□□□□□ -0.72
HHO1P53551 YJR120WYJR120W 351 nt10.52□□□□□ -0.73
HHO1P53551 RTF1YGL244W 1677 nt10.5□□□□□ -0.73
HHO1P53551 YSC84YHR016C 1407 nt10.49□□□□□ -0.73
HHO1P53551 BOR1YNL275W 1731 nt10.47□□□□□ -0.73
HHO1P53551 PTP1YDL230W 1008 nt10.47□□□□□ -0.73
HHO1P53551 RPP2BYDR382W 333 nt10.47□□□□□ -0.73
HHO1P53551 UME6YDR207C 2511 nt10.46□□□□□ -0.73
HHO1P53551 RPP2AYOL039W 321 nt10.45□□□□□ -0.74
HHO1P53551 IRC15YPL017C 1500 nt10.43□□□□□ -0.74
HHO1P53551 YBL100CYBL100C 315 nt10.4□□□□□ -0.74
HHO1P53551 GIS3YLR094C 1509 nt10.38□□□□□ -0.75
HHO1P53551 BOP3YNL042W 1191 nt10.35□□□□□ -0.75
HHO1P53551 YHL050CYHL050C 2094 nt10.35□□□□□ -0.75
HHO1P53551 ALF1YNL148C 765 nt10.32□□□□□ -0.76
HHO1P53551 PTK1YKL198C 1989 nt10.31□□□□□ -0.76
HHO1P53551 SCR1SCR1 522 nt10.29□□□□□ -0.76
HHO1P53551 SSA1YAL005C 1929 nt10.25□□□□□ -0.77
HHO1P53551 FUN26YAL022C 1554 nt10.24□□□□□ -0.77
HHO1P53551 RRT12YCR045C 1476 nt10.23□□□□□ -0.77
HHO1P53551 RRN5YLR141W 1092 nt10.23□□□□□ -0.77
HHO1P53551 MCH5YOR306C 1566 nt10.2□□□□□ -0.78
HHO1P53551 TIR1YER011W 765 nt10.19□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms