Protein–RNA interactions for Protein: P04147

PAB1, Polyadenylate-binding protein, cytoplasmic and nuclear, yeastyeast

Known RBP RIP-Chip data

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PAB1P04147 YML009W-BYML009W-B 477 nt21.24■□□□□ 0.99 RIP-Chip
PAB1P04147 NSR1YGR159C 1245 nt21.08■□□□□ 0.97
PAB1P04147 NOP1YDL014W 984 nt20.65■□□□□ 0.9
PAB1P04147 YKL036CYKL036C 393 nt19.15■□□□□ 0.66
PAB1P04147 MDJ1YFL016C 1536 nt18.66■□□□□ 0.58
PAB1P04147 Q0297Q0297 156 nt18.16■□□□□ 0.5
PAB1P04147 SRX1YKL086W 384 nt18.1■□□□□ 0.49
PAB1P04147 YJL027CYJL027C 417 nt17.85■□□□□ 0.45
PAB1P04147 SCS3YGL126W 1143 nt17.48■□□□□ 0.39 RIP-Chip
PAB1P04147 YCR051WYCR051W 669 nt17.12■□□□□ 0.33 RIP-Chip
PAB1P04147 YOL085CYOL085C 342 nt16.6■□□□□ 0.25
PAB1P04147 DBP2YNL112W 1641 nt16.59■□□□□ 0.25
PAB1P04147 TRN1tP(UGG)A 72 nt16.34■□□□□ 0.21
PAB1P04147 SUF9tP(UGG)F 72 nt16.34■□□□□ 0.21
PAB1P04147 SUF8tP(UGG)H 72 nt16.34■□□□□ 0.21
PAB1P04147 tP(UGG)LtP(UGG)L 72 nt16.34■□□□□ 0.21
PAB1P04147 SUF7tP(UGG)M 72 nt16.34■□□□□ 0.21
PAB1P04147 tP(UGG)N1tP(UGG)N1 72 nt16.34■□□□□ 0.21
PAB1P04147 tP(UGG)N2tP(UGG)N2 72 nt16.34■□□□□ 0.21
PAB1P04147 tP(UGG)O1tP(UGG)O1 72 nt16.34■□□□□ 0.21
PAB1P04147 SUF11tP(UGG)O2 72 nt16.34■□□□□ 0.21
PAB1P04147 PKP1YIL042C 1185 nt16.32■□□□□ 0.2
PAB1P04147 RPP1BYDL130W 321 nt16.28■□□□□ 0.2 RIP-Chip
PAB1P04147 CCC1YLR220W 969 nt16.11■□□□□ 0.17
PAB1P04147 YBR190WYBR190W 312 nt15.9■□□□□ 0.14
PAB1P04147 ATS1YAL020C 1002 nt15.64■□□□□ 0.09
PAB1P04147 SCJ1YMR214W 1134 nt15.56■□□□□ 0.08 RIP-Chip
PAB1P04147 PET122YER153C 765 nt15.55■□□□□ 0.08
PAB1P04147 RVS167YDR388W 1449 nt15.51■□□□□ 0.07
PAB1P04147 RTC3YHR087W 336 nt15.49■□□□□ 0.07 RIP-Chip
PAB1P04147 tP(UGG)O3tP(UGG)O3 72 nt15.47■□□□□ 0.07
PAB1P04147 SCR1SCR1 522 nt15.35■□□□□ 0.05
PAB1P04147 RRN5YLR141W 1092 nt15.1■□□□□ 0.01 RIP-Chip
PAB1P04147 SHR5YOL110W 714 nt15.03■□□□□ -0 RIP-Chip
PAB1P04147 YDJ1YNL064C 1230 nt14.97□□□□□ -0.01
PAB1P04147 YER088W-BYER088W-B 147 nt14.81□□□□□ -0.04
PAB1P04147 RSB1YOR049C 1065 nt14.77□□□□□ -0.05
PAB1P04147 GAR1YHR089C 618 nt14.58□□□□□ -0.08 RIP-Chip
PAB1P04147 URN1YPR152C 1398 nt14.57□□□□□ -0.08
PAB1P04147 DEP1YAL013W 1218 nt14.56□□□□□ -0.08
PAB1P04147 PST2YDR032C 597 nt14.5□□□□□ -0.09 RIP-Chip
PAB1P04147 PUT4YOR348C 1884 nt14.42□□□□□ -0.1
PAB1P04147 OPI9YLR338W 858 nt14.36□□□□□ -0.11
PAB1P04147 YNL208WYNL208W 600 nt14.35□□□□□ -0.11
PAB1P04147 RPN10YHR200W 807 nt14.33□□□□□ -0.12
PAB1P04147 SSA3YBL075C 1950 nt14.26□□□□□ -0.13
PAB1P04147 SAH1YER043C 1350 nt14.24□□□□□ -0.13
PAB1P04147 ARE1YCR048W 1833 nt14.19□□□□□ -0.14
PAB1P04147 TIR1YER011W 765 nt14.12□□□□□ -0.15
PAB1P04147 SSA1YAL005C 1929 nt13.96□□□□□ -0.17
PAB1P04147 YHR049C-AYHR049C-A 297 nt13.96□□□□□ -0.17
PAB1P04147 POA1YBR022W 534 nt13.94□□□□□ -0.18 RIP-Chip
PAB1P04147 PUN1YLR414C 792 nt13.92□□□□□ -0.18 RIP-Chip
PAB1P04147 YKL097CYKL097C 411 nt13.91□□□□□ -0.18 RIP-Chip
PAB1P04147 YJR018WYJR018W 363 nt13.9□□□□□ -0.18
PAB1P04147 SHU1YHL006C 453 nt13.89□□□□□ -0.19
PAB1P04147 YJR120WYJR120W 351 nt13.78□□□□□ -0.2
PAB1P04147 SRB2YHR041C 633 nt13.77□□□□□ -0.21 RIP-Chip
PAB1P04147 PTC2YER089C 1395 nt13.73□□□□□ -0.21
PAB1P04147 BSC6YOL137W 1494 nt13.71□□□□□ -0.21
PAB1P04147 YAL037C-BYAL037C-B 975 nt13.63□□□□□ -0.23
PAB1P04147 BUD23YCR047C 828 nt13.6□□□□□ -0.23
PAB1P04147 RPP2BYDR382W 333 nt13.6□□□□□ -0.23 RIP-Chip
PAB1P04147 NAB2YGL122C 1578 nt13.56□□□□□ -0.24
PAB1P04147 WWM1YFL010C 636 nt13.51□□□□□ -0.25
PAB1P04147 YGR021WYGR021W 873 nt13.43□□□□□ -0.26
PAB1P04147 HOM6YJR139C 1080 nt13.43□□□□□ -0.26
PAB1P04147 FIS1YIL065C 468 nt13.42□□□□□ -0.26 RIP-Chip
PAB1P04147 YOR139CYOR139C 393 nt13.4□□□□□ -0.26
PAB1P04147 INM2YDR287W 879 nt13.39□□□□□ -0.27
PAB1P04147 BDH2YAL061W 1254 nt13.39□□□□□ -0.27
PAB1P04147 DAL1YIR027C 1383 nt13.39□□□□□ -0.27
PAB1P04147 MNP1YGL068W 585 nt13.36□□□□□ -0.27 RIP-Chip
PAB1P04147 FPR4YLR449W 1179 nt13.31□□□□□ -0.28
PAB1P04147 YFL021C-AYFL021C-A 855 nt13.29□□□□□ -0.28
PAB1P04147 PHO4YFR034C 939 nt13.28□□□□□ -0.28
PAB1P04147 YBL100CYBL100C 315 nt13.28□□□□□ -0.28
PAB1P04147 LSM3YLR438C-A 270 nt13.23□□□□□ -0.29 RIP-Chip
PAB1P04147 SPT5YML010W 3192 nt13.22□□□□□ -0.29 RIP-Chip
PAB1P04147 RKM5YLR137W 1104 nt13.21□□□□□ -0.29
PAB1P04147 NPL3YDR432W 1245 nt13.2□□□□□ -0.3
PAB1P04147 YOL037CYOL037C 354 nt13.15□□□□□ -0.3
PAB1P04147 FUN26YAL022C 1554 nt13.13□□□□□ -0.31
PAB1P04147 TRM9YML014W 840 nt13.09□□□□□ -0.31
PAB1P04147 YPS1YLR120C 1710 nt13.01□□□□□ -0.33
PAB1P04147 CCT6YDR188W 1641 nt13□□□□□ -0.33
PAB1P04147 SSA4YER103W 1929 nt12.99□□□□□ -0.33
PAB1P04147 YDR095CYDR095C 411 nt12.95□□□□□ -0.34
PAB1P04147 MEP2YNL142W 1500 nt12.9□□□□□ -0.34
PAB1P04147 ALF1YNL148C 765 nt12.88□□□□□ -0.35
PAB1P04147 tM(CAU)CtM(CAU)C 72 nt12.87□□□□□ -0.35
PAB1P04147 IMT4tM(CAU)E 72 nt12.87□□□□□ -0.35
PAB1P04147 IMT3tM(CAU)J3 72 nt12.87□□□□□ -0.35
PAB1P04147 IMT1tM(CAU)O1 72 nt12.87□□□□□ -0.35
PAB1P04147 IMT2tM(CAU)P 72 nt12.87□□□□□ -0.35
PAB1P04147 YLR281CYLR281C 468 nt12.87□□□□□ -0.35
PAB1P04147 SUF2tP(AGG)C 72 nt12.83□□□□□ -0.36
PAB1P04147 SUF10tP(AGG)N 72 nt12.83□□□□□ -0.36
PAB1P04147 YHR165W-AYHR165W-A 312 nt12.81□□□□□ -0.36
PAB1P04147 WHI5YOR083W 888 nt12.79□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms