Protein–RNA interactions for Protein: P38627

URA8, CTP synthase 2, yeastyeast

Predicted RBP Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
URA8P38627 YML009W-BYML009W-B 477 nt21.08■□□□□ 0.97
URA8P38627 NSR1YGR159C 1245 nt20.89■□□□□ 0.93
URA8P38627 NOP1YDL014W 984 nt20.54■□□□□ 0.88
URA8P38627 YKL036CYKL036C 393 nt19.08■□□□□ 0.64
URA8P38627 MDJ1YFL016C 1536 nt18.43■□□□□ 0.54
URA8P38627 Q0297Q0297 156 nt18.08■□□□□ 0.48
URA8P38627 SRX1YKL086W 384 nt17.99■□□□□ 0.47
URA8P38627 YJL027CYJL027C 417 nt17.8■□□□□ 0.44
URA8P38627 SCS3YGL126W 1143 nt17.43■□□□□ 0.38
URA8P38627 YCR051WYCR051W 669 nt17.01■□□□□ 0.31
URA8P38627 YOL085CYOL085C 342 nt16.53■□□□□ 0.24
URA8P38627 DBP2YNL112W 1641 nt16.41■□□□□ 0.22
URA8P38627 TRN1tP(UGG)A 72 nt16.22■□□□□ 0.19
URA8P38627 SUF9tP(UGG)F 72 nt16.22■□□□□ 0.19
URA8P38627 SUF8tP(UGG)H 72 nt16.22■□□□□ 0.19
URA8P38627 tP(UGG)LtP(UGG)L 72 nt16.22■□□□□ 0.19
URA8P38627 SUF7tP(UGG)M 72 nt16.22■□□□□ 0.19
URA8P38627 tP(UGG)N1tP(UGG)N1 72 nt16.22■□□□□ 0.19
URA8P38627 tP(UGG)N2tP(UGG)N2 72 nt16.22■□□□□ 0.19
URA8P38627 tP(UGG)O1tP(UGG)O1 72 nt16.22■□□□□ 0.19
URA8P38627 SUF11tP(UGG)O2 72 nt16.22■□□□□ 0.19
URA8P38627 PKP1YIL042C 1185 nt16.22■□□□□ 0.19
URA8P38627 RPP1BYDL130W 321 nt16.2■□□□□ 0.18
URA8P38627 CCC1YLR220W 969 nt15.96■□□□□ 0.15
URA8P38627 YBR190WYBR190W 312 nt15.7■□□□□ 0.1
URA8P38627 ATS1YAL020C 1002 nt15.62■□□□□ 0.09
URA8P38627 SCJ1YMR214W 1134 nt15.61■□□□□ 0.09
URA8P38627 PET122YER153C 765 nt15.46■□□□□ 0.07
URA8P38627 RVS167YDR388W 1449 nt15.37■□□□□ 0.05
URA8P38627 tP(UGG)O3tP(UGG)O3 72 nt15.35■□□□□ 0.05
URA8P38627 RTC3YHR087W 336 nt15.29■□□□□ 0.04
URA8P38627 SCR1SCR1 522 nt15.28■□□□□ 0.04
URA8P38627 RRN5YLR141W 1092 nt15.01□□□□□ -0.01
URA8P38627 SHR5YOL110W 714 nt14.91□□□□□ -0.02
URA8P38627 YDJ1YNL064C 1230 nt14.87□□□□□ -0.03
URA8P38627 YER088W-BYER088W-B 147 nt14.73□□□□□ -0.05
URA8P38627 RSB1YOR049C 1065 nt14.7□□□□□ -0.06
URA8P38627 PST2YDR032C 597 nt14.48□□□□□ -0.09
URA8P38627 GAR1YHR089C 618 nt14.46□□□□□ -0.09
URA8P38627 URN1YPR152C 1398 nt14.4□□□□□ -0.1
URA8P38627 DEP1YAL013W 1218 nt14.39□□□□□ -0.11
URA8P38627 YNL208WYNL208W 600 nt14.21□□□□□ -0.13
URA8P38627 PUT4YOR348C 1884 nt14.21□□□□□ -0.14
URA8P38627 RPN10YHR200W 807 nt14.2□□□□□ -0.14
URA8P38627 OPI9YLR338W 858 nt14.2□□□□□ -0.14
URA8P38627 SAH1YER043C 1350 nt14.06□□□□□ -0.16
URA8P38627 TIR1YER011W 765 nt14□□□□□ -0.17
URA8P38627 ARE1YCR048W 1833 nt13.98□□□□□ -0.17
URA8P38627 YKL097CYKL097C 411 nt13.91□□□□□ -0.18
URA8P38627 SHU1YHL006C 453 nt13.84□□□□□ -0.19
URA8P38627 SSA1YAL005C 1929 nt13.84□□□□□ -0.19
URA8P38627 PUN1YLR414C 792 nt13.77□□□□□ -0.21
URA8P38627 YHR049C-AYHR049C-A 297 nt13.76□□□□□ -0.21
URA8P38627 YJR018WYJR018W 363 nt13.74□□□□□ -0.21
URA8P38627 POA1YBR022W 534 nt13.71□□□□□ -0.21
URA8P38627 SRB2YHR041C 633 nt13.65□□□□□ -0.22
URA8P38627 YJR120WYJR120W 351 nt13.63□□□□□ -0.23
URA8P38627 PTC2YER089C 1395 nt13.57□□□□□ -0.24
URA8P38627 YAL037C-BYAL037C-B 975 nt13.55□□□□□ -0.24
URA8P38627 RPP2BYDR382W 333 nt13.47□□□□□ -0.25
URA8P38627 BSC6YOL137W 1494 nt13.42□□□□□ -0.26
URA8P38627 BUD23YCR047C 828 nt13.4□□□□□ -0.26
URA8P38627 WWM1YFL010C 636 nt13.4□□□□□ -0.26
URA8P38627 NAB2YGL122C 1578 nt13.39□□□□□ -0.27
URA8P38627 YOR139CYOR139C 393 nt13.38□□□□□ -0.27
URA8P38627 YGR021WYGR021W 873 nt13.37□□□□□ -0.27
URA8P38627 HOM6YJR139C 1080 nt13.35□□□□□ -0.27
URA8P38627 SSA3YBL075C 1950 nt13.34□□□□□ -0.27
URA8P38627 MNP1YGL068W 585 nt13.27□□□□□ -0.29
URA8P38627 BDH2YAL061W 1254 nt13.27□□□□□ -0.29
URA8P38627 FIS1YIL065C 468 nt13.26□□□□□ -0.29
URA8P38627 DAL1YIR027C 1383 nt13.24□□□□□ -0.29
URA8P38627 INM2YDR287W 879 nt13.24□□□□□ -0.29
URA8P38627 YFL021C-AYFL021C-A 855 nt13.2□□□□□ -0.3
URA8P38627 NPL3YDR432W 1245 nt13.18□□□□□ -0.3
URA8P38627 RKM5YLR137W 1104 nt13.14□□□□□ -0.31
URA8P38627 LSM3YLR438C-A 270 nt13.13□□□□□ -0.31
URA8P38627 FPR4YLR449W 1179 nt13.13□□□□□ -0.31
URA8P38627 YBL100CYBL100C 315 nt13.13□□□□□ -0.31
URA8P38627 PHO4YFR034C 939 nt13.12□□□□□ -0.31
URA8P38627 YOL037CYOL037C 354 nt13.12□□□□□ -0.31
URA8P38627 FUN26YAL022C 1554 nt12.98□□□□□ -0.33
URA8P38627 TRM9YML014W 840 nt12.96□□□□□ -0.33
URA8P38627 CCT6YDR188W 1641 nt12.88□□□□□ -0.35
URA8P38627 tM(CAU)CtM(CAU)C 72 nt12.85□□□□□ -0.35
URA8P38627 IMT4tM(CAU)E 72 nt12.85□□□□□ -0.35
URA8P38627 IMT3tM(CAU)J3 72 nt12.85□□□□□ -0.35
URA8P38627 IMT1tM(CAU)O1 72 nt12.85□□□□□ -0.35
URA8P38627 IMT2tM(CAU)P 72 nt12.85□□□□□ -0.35
URA8P38627 YPS1YLR120C 1710 nt12.84□□□□□ -0.35
URA8P38627 YLR281CYLR281C 468 nt12.82□□□□□ -0.36
URA8P38627 SPT5YML010W 3192 nt12.81□□□□□ -0.36
URA8P38627 YDR095CYDR095C 411 nt12.78□□□□□ -0.36
URA8P38627 WHI5YOR083W 888 nt12.73□□□□□ -0.37
URA8P38627 ALF1YNL148C 765 nt12.72□□□□□ -0.37
URA8P38627 SUF2tP(AGG)C 72 nt12.71□□□□□ -0.37
URA8P38627 SUF10tP(AGG)N 72 nt12.71□□□□□ -0.37
URA8P38627 PUS2YGL063W 1113 nt12.68□□□□□ -0.38
URA8P38627 YHR165W-AYHR165W-A 312 nt12.63□□□□□ -0.39
URA8P38627 YLR154C-GYLR154C-G 150 nt12.62□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms