RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W THO2P53552 1597 aaKnown RBP2.48□□□□□ -2.01
SMC1YFL008W MET22P32179 357 aa2.48□□□□□ -2.01
SMC1YFL008W ATG2P53855 1592 aa2.48□□□□□ -2.01
SMC1YFL008W SUP45P12385 437 aaKnown RBP2.48□□□□□ -2.01
SMC1YFL008W ESS1P22696 170 aa2.47□□□□□ -2.01
SMC1YFL008W CLB5P30283 435 aa2.47□□□□□ -2.01
SMC1YFL008W KIC1P38692 1080 aa2.47□□□□□ -2.01
SMC1YFL008W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SMC1YFL008W BIO2P32451 375 aa2.47□□□□□ -2.01
SMC1YFL008W RRD1P40454 393 aaKnown RBP2.47□□□□□ -2.01
SMC1YFL008W YDR444WQ04093 687 aa2.47□□□□□ -2.01
SMC1YFL008W YPR097WQ06839 1073 aa2.47□□□□□ -2.01
SMC1YFL008W TRM1P15565 570 aaKnown RBP2.46□□□□□ -2.02
SMC1YFL008W BDP1P46678 594 aa2.46□□□□□ -2.02
SMC1YFL008W MRX10Q05648 414 aa2.46□□□□□ -2.02
SMC1YFL008W VAC17P25591 423 aa2.46□□□□□ -2.02
SMC1YFL008W RQC2Q12532 1038 aaKnown RBP2.46□□□□□ -2.02
SMC1YFL008W MET32Q12041 191 aa2.45□□□□□ -2.02
SMC1YFL008W TFB3Q03290 321 aa2.45□□□□□ -2.02
SMC1YFL008W RAD59Q12223 238 aa2.45□□□□□ -2.02
SMC1YFL008W MAK16P10962 306 aaPredicted RBP2.45□□□□□ -2.02
SMC1YFL008W PEP12P32854 288 aa2.45□□□□□ -2.02
SMC1YFL008W MRT4P33201 236 aaKnown RBP2.45□□□□□ -2.02
SMC1YFL008W RRN7P40992 514 aa2.45□□□□□ -2.02
SMC1YFL008W HXT10P43581 546 aa2.45□□□□□ -2.02
SMC1YFL008W CSN12P47130 423 aa2.45□□□□□ -2.02
SMC1YFL008W ITT1Q04638 464 aa2.44□□□□□ -2.02
SMC1YFL008W CDC4P07834 779 aa2.44□□□□□ -2.02
SMC1YFL008W YDJ1P25491 409 aaKnown RBP2.44□□□□□ -2.02
SMC1YFL008W FIG4P42837 879 aa2.44□□□□□ -2.02
SMC1YFL008W RPA14P50106 137 aa2.44□□□□□ -2.02
SMC1YFL008W HSL1P34244 1518 aa2.43□□□□□ -2.02
SMC1YFL008W RIM21P48565 533 aa2.43□□□□□ -2.02
SMC1YFL008W MMP1Q12372 583 aa2.43□□□□□ -2.02
SMC1YFL008W PAT1P25644 796 aaKnown RBP2.43□□□□□ -2.02
SMC1YFL008W HST3P53687 447 aa2.43□□□□□ -2.02
SMC1YFL008W ENV9Q08651 330 aa2.43□□□□□ -2.02
SMC1YFL008W KTR2P33550 425 aa2.42□□□□□ -2.02
SMC1YFL008W ASH1P34233 588 aa2.42□□□□□ -2.02
SMC1YFL008W HAL5P38970 855 aaKnown RBP2.42□□□□□ -2.02
SMC1YFL008W DMA2P53924 522 aa2.42□□□□□ -2.02
SMC1YFL008W YDL206WQ12424 762 aa2.42□□□□□ -2.02
SMC1YFL008W TY1B-JR2P47100 1755 aaKnown RBP2.42□□□□□ -2.02
SMC1YFL008W TY1B-ER2Q03619 1755 aa2.42□□□□□ -2.02
SMC1YFL008W TY1B-MR1Q04214 1755 aa2.42□□□□□ -2.02
SMC1YFL008W TY1B-MR2Q04670 1755 aaKnown RBP2.42□□□□□ -2.02
SMC1YFL008W TY1B-LR1Q12088 1755 aaKnown RBP2.42□□□□□ -2.02
SMC1YFL008W TY1B-NL1Q12112 1755 aa2.42□□□□□ -2.02
SMC1YFL008W TY1B-GR1Q12141 1755 aa2.42□□□□□ -2.02
SMC1YFL008W TY1B-BLQ12490 1755 aa2.42□□□□□ -2.02
SMC1YFL008W SLY41P22215 453 aa2.42□□□□□ -2.02
SMC1YFL008W PUS6P53294 404 aa2.42□□□□□ -2.02
SMC1YFL008W FRA1Q07825 749 aa2.42□□□□□ -2.02
SMC1YFL008W ATG32P40458 529 aa2.41□□□□□ -2.02
SMC1YFL008W YDL176WQ12027 708 aa2.41□□□□□ -2.02
SMC1YFL008W EMW1P42842 904 aaKnown RBP2.4□□□□□ -2.02
SMC1YFL008W ENO2P00925 437 aaKnown RBP2.4□□□□□ -2.03
SMC1YFL008W YBL086CP38177 466 aa2.4□□□□□ -2.03
SMC1YFL008W NAF1P53919 492 aaKnown RBP2.4□□□□□ -2.03
SMC1YFL008W PUS5Q06244 254 aa2.4□□□□□ -2.03
SMC1YFL008W HED1Q03937 162 aa2.39□□□□□ -2.03
SMC1YFL008W CSE4P36012 229 aa2.39□□□□□ -2.03
SMC1YFL008W ATF2P53296 535 aa2.39□□□□□ -2.03
SMC1YFL008W TIF1P10081 395 aaKnown RBP2.38□□□□□ -2.03
SMC1YFL008W CAF120P53836 1060 aa2.38□□□□□ -2.03
SMC1YFL008W PKH3Q03306 898 aaPredicted RBP2.38□□□□□ -2.03
SMC1YFL008W TY1A-DR3Q12441 440 aa2.38□□□□□ -2.03
SMC1YFL008W BIM1P40013 344 aa2.38□□□□□ -2.03
SMC1YFL008W MTC5Q03897 1148 aa2.38□□□□□ -2.03
SMC1YFL008W HIR3P47171 1648 aa2.38□□□□□ -2.03
SMC1YFL008W RPS31P05759 152 aaKnown RBP2.38□□□□□ -2.03
SMC1YFL008W SLA1P32790 1244 aa2.38□□□□□ -2.03
SMC1YFL008W YPQ2Q06328 317 aa2.38□□□□□ -2.03
SMC1YFL008W ESP1Q03018 1630 aa2.37□□□□□ -2.03
SMC1YFL008W SUV3P32580 737 aa2.37□□□□□ -2.03
SMC1YFL008W LCB5Q06147 687 aaKnown RBP2.37□□□□□ -2.03
SMC1YFL008W KOG1P38873 1557 aa2.37□□□□□ -2.03
SMC1YFL008W CCP1P00431 361 aa2.37□□□□□ -2.03
SMC1YFL008W STE6P12866 1290 aa2.37□□□□□ -2.03
SMC1YFL008W IXR1P33417 597 aa2.37□□□□□ -2.03
SMC1YFL008W RPA190P10964 1664 aaKnown RBP2.37□□□□□ -2.03
SMC1YFL008W XRN1P22147 1528 aaKnown RBP2.37□□□□□ -2.03
SMC1YFL008W NOB1Q08444 459 aaKnown RBP2.37□□□□□ -2.03
SMC1YFL008W MCM16Q12262 181 aa2.37□□□□□ -2.03
SMC1YFL008W AFT1P22149 690 aa2.36□□□□□ -2.03
SMC1YFL008W TPS3P38426 1054 aaKnown RBP2.36□□□□□ -2.03
SMC1YFL008W MSB3P48566 633 aaPredicted RBP2.36□□□□□ -2.03
SMC1YFL008W ENO1P00924 437 aaKnown RBP2.36□□□□□ -2.03
SMC1YFL008W SSA2P10592 639 aaKnown RBP2.36□□□□□ -2.03
SMC1YFL008W ISF1P32488 338 aa2.36□□□□□ -2.03
SMC1YFL008W YJR115WP47152 169 aa2.36□□□□□ -2.03
SMC1YFL008W SRF1Q12516 437 aa2.36□□□□□ -2.03
SMC1YFL008W SSN3P39073 555 aa2.35□□□□□ -2.03
SMC1YFL008W PUP1P25043 261 aa2.35□□□□□ -2.03
SMC1YFL008W SHM1P37292 490 aaPredicted RBP2.35□□□□□ -2.03
SMC1YFL008W YJL007CP47080 104 aa2.35□□□□□ -2.03
SMC1YFL008W ARG8P18544 423 aa2.34□□□□□ -2.04
SMC1YFL008W YNL165WP53891 406 aa2.34□□□□□ -2.04
SMC1YFL008W YNL108CP53929 270 aa2.34□□□□□ -2.04
SMC1YFL008W ALR1Q08269 859 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms