RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 KIF3BO15066 747 aa32.48■■■□□ 2.79
TARDBP-228ENST00000629725 CEP162Q5TB80 1403 aa32.48■■■□□ 2.79
TARDBP-228ENST00000629725 FBXO31Q5XUX0 539 aaPredicted RBP32.47■■■□□ 2.79
TARDBP-228ENST00000629725 NEURL4Q96JN8 1562 aa32.46■■■□□ 2.79
TARDBP-228ENST00000629725 SCAF1Q9H7N4 1312 aaKnown RBP32.46■■■□□ 2.79
TARDBP-228ENST00000629725 CPS1P31327 1500 aa32.46■■■□□ 2.79
TARDBP-228ENST00000629725 KDM5DQ9BY66 1539 aa32.46■■■□□ 2.79
TARDBP-228ENST00000629725 PZPP20742 1482 aa32.45■■■□□ 2.79
TARDBP-228ENST00000629725 FAM135AQ9P2D6 1515 aa32.44■■■□□ 2.78
TARDBP-228ENST00000629725 CCDC141Q6ZP82 1450 aa32.42■■■□□ 2.78
TARDBP-228ENST00000629725 TOM1O60784 492 aa32.42■■■□□ 2.78
TARDBP-228ENST00000629725 PIP4K2BP78356 416 aa32.42■■■□□ 2.78
TARDBP-228ENST00000629725 WASHC2CQ9Y4E1 1318 aa32.42■■■□□ 2.78
TARDBP-228ENST00000629725 SHANK2Q9UPX8 1470 aa32.42■■■□□ 2.78
TARDBP-228ENST00000629725 HSPA1LP34931 641 aa32.4■■■□□ 2.78
TARDBP-228ENST00000629725 RSPH4AQ5TD94 716 aa32.38■■■□□ 2.77
TARDBP-228ENST00000629725 ANKLE2Q86XL3 938 aa32.38■■■□□ 2.77
TARDBP-228ENST00000629725 CAMSAP2Q08AD1 1489 aa32.37■■■□□ 2.77
TARDBP-228ENST00000629725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.37■■■□□ 2.771e-6■■■□□ 15.4
TARDBP-228ENST00000629725 THEMISQ8N1K5 641 aaPredicted RBP32.36■■■□□ 2.77
TARDBP-228ENST00000629725 MED1Q15648 1581 aaPredicted RBP32.34■■■□□ 2.77
TARDBP-228ENST00000629725 NLRP1Q9C000 1473 aa32.34■■■□□ 2.77
TARDBP-228ENST00000629725 MIA2Q96PC5 1412 aa32.34■■■□□ 2.77
TARDBP-228ENST00000629725 UGGT1Q9NYU2 1555 aa32.33■■■□□ 2.77
TARDBP-228ENST00000629725 NCOA2Q15596 1464 aa32.33■■■□□ 2.77
TARDBP-228ENST00000629725 VWDEQ8N2E2 1590 aa32.32■■■□□ 2.76
TARDBP-228ENST00000629725 DEPDC5O75140 1603 aa32.3■■■□□ 2.76
TARDBP-228ENST00000629725 MED14O60244 1454 aa32.29■■■□□ 2.76
TARDBP-228ENST00000629725 NPHP4O75161 1426 aaPredicted RBP32.27■■■□□ 2.76
TARDBP-228ENST00000629725 TSPY4P0CV99 314 aa32.27■■■□□ 2.76
TARDBP-228ENST00000629725 TSPY10P0CW01 314 aa32.27■■■□□ 2.76
TARDBP-228ENST00000629725 ARHGEF5Q12774 1597 aa32.27■■■□□ 2.76
TARDBP-228ENST00000629725 IQGAP1P46940 1657 aa32.24■■■□□ 2.75
TARDBP-228ENST00000629725 RNF17Q9BXT8 1623 aaKnown RBP32.2■■■□□ 2.75
TARDBP-228ENST00000629725 ALKQ9UM73 1620 aa32.19■■■□□ 2.74
TARDBP-228ENST00000629725 ZC3H13Q5T200 1668 aaKnown RBP32.19■■■□□ 2.74
TARDBP-228ENST00000629725 ABCC3O15438 1527 aa32.16■■■□□ 2.74
TARDBP-228ENST00000629725 STRCP1A6NGW2 1772 aa32.16■■■□□ 2.74
TARDBP-228ENST00000629725 PHF23Q9BUL5 403 aaPredicted RBP32.14■■■□□ 2.74
TARDBP-228ENST00000629725 MAST1Q9Y2H9 1570 aa32.12■■■□□ 2.73
TARDBP-228ENST00000629725 EIF2AK4Q9P2K8 1649 aaKnown RBP32.11■■■□□ 2.73
TARDBP-228ENST00000629725 SYNMO15061 1565 aa32.11■■■□□ 2.73
TARDBP-228ENST00000629725 LRRC7Q96NW7 1537 aa32.1■■■□□ 2.73
TARDBP-228ENST00000629725 ERVK-7P63135 1459 aa32.1■■■□□ 2.73
TARDBP-228ENST00000629725 CFAP65Q6ZU64 1925 aaKnown RBP32.1■■■□□ 2.73
TARDBP-228ENST00000629725 LRRC9Q6ZRR7 1453 aa32.06■■■□□ 2.72
TARDBP-228ENST00000629725 CEP152O94986 1710 aa32.06■■■□□ 2.72
TARDBP-228ENST00000629725 UBR1Q8IWV7 1749 aa32.06■■■□□ 2.72
TARDBP-228ENST00000629725 SENP3Q9H4L4 574 aaPredicted RBP32.05■■■□□ 2.72
TARDBP-228ENST00000629725 MROH1Q8NDA8 1641 aa32.04■■■□□ 2.72
TARDBP-228ENST00000629725 SCAF11Q99590 1463 aaKnown RBP31.99■■■□□ 2.71
TARDBP-228ENST00000629725 DUOX2Q9NRD8 1548 aa31.96■■■□□ 2.71
TARDBP-228ENST00000629725 VPS8Q8N3P4 1428 aa31.95■■■□□ 2.71
TARDBP-228ENST00000629725 LTKP29376 864 aa31.93■■■□□ 2.7
TARDBP-228ENST00000629725 TXNDC2Q86VQ3 553 aa31.93■■■□□ 2.7
TARDBP-228ENST00000629725 SLIT1O75093 1534 aa31.93■■■□□ 2.7
TARDBP-228ENST00000629725 MYOM3Q5VTT5 1437 aa31.92■■■□□ 2.7
TARDBP-228ENST00000629725 ARHGAP23Q9P227 1491 aa31.92■■■□□ 2.7
TARDBP-228ENST00000629725 XIRP1Q702N8 1843 aaKnown RBP31.91■■■□□ 2.7
TARDBP-228ENST00000629725 KANK4Q5T7N3 995 aaPredicted RBP31.9■■■□□ 2.7
TARDBP-228ENST00000629725 ARHGAP31Q2M1Z3 1444 aa31.89■■■□□ 2.7
TARDBP-228ENST00000629725 PRDM15P57071 1507 aaPredicted RBP31.89■■■□□ 2.7
TARDBP-228ENST00000629725 EID1Q9Y6B2 187 aa31.88■■■□□ 2.69
TARDBP-228ENST00000629725 MAP3K1Q13233 1512 aa31.86■■■□□ 2.69
TARDBP-228ENST00000629725 KIF15Q9NS87 1388 aa31.85■■■□□ 2.69
TARDBP-228ENST00000629725 ERBINQ96RT1 1412 aa31.83■■■□□ 2.69
TARDBP-228ENST00000629725 PIK3C2BO00750 1634 aa31.83■■■□□ 2.69
TARDBP-228ENST00000629725 CROCC2H7BZ55 1655 aa31.82■■■□□ 2.68
TARDBP-228ENST00000629725 RRP7BPQ9NSQ0 103 aa31.8■■■□□ 2.68
TARDBP-228ENST00000629725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.79■■■□□ 2.682e-9■■□□□ 13.4
TARDBP-228ENST00000629725 RGS17Q9UGC6 210 aaPredicted RBP31.79■■■□□ 2.68
TARDBP-228ENST00000629725 STAG3Q9UJ98 1225 aa31.79■■■□□ 2.68
TARDBP-228ENST00000629725 TMEM2Q9UHN6 1383 aa31.79■■■□□ 2.68
TARDBP-228ENST00000629725 ABCC5O15440 1437 aa31.76■■■□□ 2.68
TARDBP-228ENST00000629725 KDM5AP29375 1690 aaKnown RBP31.76■■■□□ 2.67
TARDBP-228ENST00000629725 FAM135BQ49AJ0 1406 aa31.75■■■□□ 2.67
TARDBP-228ENST00000629725 KANK1Q14678 1352 aa31.74■■■□□ 2.67
TARDBP-228ENST00000629725 EFCAB6Q5THR3 1501 aa31.73■■■□□ 2.67
TARDBP-228ENST00000629725 PTPN23Q9H3S7 1636 aa31.72■■■□□ 2.67
TARDBP-228ENST00000629725 LOC105371045A0A1W2PR82 267 aa31.72■■■□□ 2.67
TARDBP-228ENST00000629725 TMEM94Q12767 1356 aa31.7■■■□□ 2.67
TARDBP-228ENST00000629725 IDI1Q13907 227 aa31.69■■■□□ 2.66
TARDBP-228ENST00000629725 DAPK1P53355 1430 aa31.68■■■□□ 2.66
TARDBP-228ENST00000629725 KCNA6P17658 529 aa31.68■■■□□ 2.66
TARDBP-228ENST00000629725 ROBO1Q9Y6N7 1651 aa31.67■■■□□ 2.66
TARDBP-228ENST00000629725 LMTK2Q8IWU2 1503 aa31.66■■■□□ 2.66
TARDBP-228ENST00000629725 TET3O43151 1660 aa31.66■■■□□ 2.66
TARDBP-228ENST00000629725 SLC26A8Q96RN1 970 aa31.65■■■□□ 2.66
TARDBP-228ENST00000629725 PROSER2Q86WR7 435 aaPredicted RBP31.64■■■□□ 2.66
TARDBP-228ENST00000629725 RBM33Q96EV2 1170 aaKnown RBP31.61■■■□□ 2.65
TARDBP-228ENST00000629725 ANKRD30AQ9BXX3 1397 aa31.6■■■□□ 2.65
TARDBP-228ENST00000629725 POTEAQ6S8J7 498 aa31.59■■■□□ 2.65
TARDBP-228ENST00000629725 CHIC2Q9UKJ5 165 aa31.59■■■□□ 2.65
TARDBP-228ENST00000629725 APLP2Q06481 763 aa31.58■■■□□ 2.65
TARDBP-228ENST00000629725 ADGRB3O60242 1522 aa31.58■■■□□ 2.65
TARDBP-228ENST00000629725 NKTRP30414 1462 aaKnown RBP31.57■■■□□ 2.64
TARDBP-228ENST00000629725 NOS1P29475 1434 aa31.57■■■□□ 2.64
TARDBP-228ENST00000629725 FGD6Q6ZV73 1430 aa31.57■■■□□ 2.64
TARDBP-228ENST00000629725 NWD1Q149M9 1564 aa31.56■■■□□ 2.64
TARDBP-228ENST00000629725 BCANQ96GW7 911 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms