RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-222	ENST00000620505	KIF3B	O15066	747 aa		13.94	□□□□□ -0.18
TARDBP-222	ENST00000620505	DHX29	Q7Z478	1369 aa	Known RBP	13.94	□□□□□ -0.18
TARDBP-222	ENST00000620505	CCDC141	Q6ZP82	1450 aa		13.93	□□□□□ -0.18
TARDBP-222	ENST00000620505	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.93	□□□□□ -0.18
TARDBP-222	ENST00000620505	LTBP4	Q8N2S1	1624 aa		13.93	□□□□□ -0.18
TARDBP-222	ENST00000620505	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.92	□□□□□ -0.18
TARDBP-222	ENST00000620505	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.91	□□□□□ -0.18
TARDBP-222	ENST00000620505	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.9	□□□□□ -0.18
TARDBP-222	ENST00000620505	VPS8	Q8N3P4	1428 aa		13.9	□□□□□ -0.19
TARDBP-222	ENST00000620505	ZNF142	P52746	1687 aa	Predicted RBP	13.89	□□□□□ -0.19
TARDBP-222	ENST00000620505	KANK4	Q5T7N3	995 aa	Predicted RBP	13.89	□□□□□ -0.19
TARDBP-222	ENST00000620505	LRRC9	Q6ZRR7	1453 aa		13.88	□□□□□ -0.19
TARDBP-222	ENST00000620505	TSPY4	P0CV99	314 aa		13.88	□□□□□ -0.19
TARDBP-222	ENST00000620505	TSPY10	P0CW01	314 aa		13.88	□□□□□ -0.19
TARDBP-222	ENST00000620505	PKD2	Q13563	968 aa		13.88	□□□□□ -0.19
TARDBP-222	ENST00000620505	RNF216	Q9NWF9	866 aa	Predicted RBP	13.88	□□□□□ -0.19
TARDBP-222	ENST00000620505	WASHC2C	Q9Y4E1	1318 aa		13.88	□□□□□ -0.19
TARDBP-222	ENST00000620505	RSPH4A	Q5TD94	716 aa		13.87	□□□□□ -0.19
TARDBP-222	ENST00000620505	PLA2R1	Q13018	1463 aa		13.87	□□□□□ -0.19
TARDBP-222	ENST00000620505	TNR	Q92752	1358 aa		13.86	□□□□□ -0.19
TARDBP-222	ENST00000620505	DISP3	Q9P2K9	1392 aa		13.86	□□□□□ -0.19
TARDBP-222	ENST00000620505	A2ML1	A8K2U0	1454 aa		13.86	□□□□□ -0.19
TARDBP-222	ENST00000620505	TCOF1	Q13428	1488 aa	Known RBP	13.86	□□□□□ -0.19
TARDBP-222	ENST00000620505	KDM5D	Q9BY66	1539 aa		13.85	□□□□□ -0.19
TARDBP-222	ENST00000620505	ARHGEF5	Q12774	1597 aa		13.85	□□□□□ -0.19
TARDBP-222	ENST00000620505	DNMT1	P26358	1616 aa	Known RBP	13.85	□□□□□ -0.19
TARDBP-222	ENST00000620505	CNKSR2	Q8WXI2	1034 aa		13.84	□□□□□ -0.19
TARDBP-222	ENST00000620505	PZP	P20742	1482 aa		13.83	□□□□□ -0.2
TARDBP-222	ENST00000620505	UBAP1L	F5GYI3	381 aa		13.83	□□□□□ -0.2
TARDBP-222	ENST00000620505	IQSEC2	Q5JU85	1478 aa		13.81	□□□□□ -0.2
TARDBP-222	ENST00000620505	ILDR2	Q71H61	639 aa		13.81	□□□□□ -0.2
TARDBP-222	ENST00000620505	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
TARDBP-222	ENST00000620505	MIA2	Q96PC5	1412 aa		13.8	□□□□□ -0.2
TARDBP-222	ENST00000620505	MYOM3	Q5VTT5	1437 aa		13.79	□□□□□ -0.2
TARDBP-222	ENST00000620505	MAST1	Q9Y2H9	1570 aa		13.79	□□□□□ -0.2
TARDBP-222	ENST00000620505	ANKLE2	Q86XL3	938 aa		13.78	□□□□□ -0.2
TARDBP-222	ENST00000620505	NEURL4	Q96JN8	1562 aa		13.78	□□□□□ -0.2
TARDBP-222	ENST00000620505	ABCC3	O15438	1527 aa		13.77	□□□□□ -0.21
TARDBP-222	ENST00000620505	POLR1A	O95602	1720 aa	Predicted RBP	13.77	□□□□□ -0.21
TARDBP-222	ENST00000620505	APLP2	Q06481	763 aa		13.77	□□□□□ -0.21
TARDBP-222	ENST00000620505	MAP3K1	Q13233	1512 aa		13.77	□□□□□ -0.21
TARDBP-222	ENST00000620505	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.77	□□□□□ -0.21
TARDBP-222	ENST00000620505	FAM135A	Q9P2D6	1515 aa		13.77	□□□□□ -0.21
TARDBP-222	ENST00000620505	SPATA31D1	Q6ZQQ2	1576 aa		13.76	□□□□□ -0.21
TARDBP-222	ENST00000620505	UGGT1	Q9NYU2	1555 aa		13.76	□□□□□ -0.21
TARDBP-222	ENST00000620505	RNF17	Q9BXT8	1623 aa	Known RBP	13.75	□□□□□ -0.21
TARDBP-222	ENST00000620505	NLRP1	Q9C000	1473 aa		13.75	□□□□□ -0.21
TARDBP-222	ENST00000620505	PIP4K2B	P78356	416 aa		13.75	□□□□□ -0.21
TARDBP-222	ENST00000620505	RRP7BP	Q9NSQ0	103 aa		13.75	□□□□□ -0.21
TARDBP-222	ENST00000620505	CEP152	O94986	1710 aa		13.74	□□□□□ -0.21
TARDBP-222	ENST00000620505	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
TARDBP-222	ENST00000620505	MROH1	Q8NDA8	1641 aa		13.74	□□□□□ -0.21
TARDBP-222	ENST00000620505	SHANK2	Q9UPX8	1470 aa		13.74	□□□□□ -0.21
TARDBP-222	ENST00000620505	NPHP4	O75161	1426 aa	Predicted RBP	13.73	□□□□□ -0.21
TARDBP-222	ENST00000620505	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.73	□□□□□ -0.21
TARDBP-222	ENST00000620505	ERVK-7	P63135	1459 aa		13.73	□□□□□ -0.21
TARDBP-222	ENST00000620505	ABCC5	O15440	1437 aa		13.73	□□□□□ -0.21
TARDBP-222	ENST00000620505	KIF15	Q9NS87	1388 aa		13.72	□□□□□ -0.21
TARDBP-222	ENST00000620505	CHIC2	Q9UKJ5	165 aa		13.72	□□□□□ -0.21
TARDBP-222	ENST00000620505	DUOX2	Q9NRD8	1548 aa		13.72	□□□□□ -0.21
TARDBP-222	ENST00000620505	ZC3H13	Q5T200	1668 aa	Known RBP	13.72	□□□□□ -0.21
TARDBP-222	ENST00000620505	PTPN23	Q9H3S7	1636 aa		13.72	□□□□□ -0.21
TARDBP-222	ENST00000620505	CPS1	P31327	1500 aa		13.7	□□□□□ -0.22
TARDBP-222	ENST00000620505	VWDE	Q8N2E2	1590 aa		13.7	□□□□□ -0.22
TARDBP-222	ENST00000620505	CFAP65	Q6ZU64	1925 aa	Known RBP	13.69	□□□□□ -0.22
TARDBP-222	ENST00000620505	TOM1	O60784	492 aa		13.69	□□□□□ -0.22
TARDBP-222	ENST00000620505	HSPA1L	P34931	641 aa		13.69	□□□□□ -0.22
TARDBP-222	ENST00000620505	DAPK1	P53355	1430 aa		13.69	□□□□□ -0.22
TARDBP-222	ENST00000620505	CROCC2	H7BZ55	1655 aa		13.69	□□□□□ -0.22
TARDBP-222	ENST00000620505	DEPDC5	O75140	1603 aa		13.68	□□□□□ -0.22
TARDBP-222	ENST00000620505	MED14	O60244	1454 aa		13.67	□□□□□ -0.22
TARDBP-222	ENST00000620505	FGD6	Q6ZV73	1430 aa		13.67	□□□□□ -0.22
TARDBP-222	ENST00000620505	IQGAP1	P46940	1657 aa		13.67	□□□□□ -0.22
TARDBP-222	ENST00000620505	ERBIN	Q96RT1	1412 aa		13.66	□□□□□ -0.22
TARDBP-222	ENST00000620505	SOCS7	O14512	581 aa		13.66	□□□□□ -0.22
TARDBP-222	ENST00000620505	PRDM15	P57071	1507 aa	Predicted RBP	13.65	□□□□□ -0.22
TARDBP-222	ENST00000620505	UBR1	Q8IWV7	1749 aa		13.65	□□□□□ -0.22
TARDBP-222	ENST00000620505	LTK	P29376	864 aa		13.65	□□□□□ -0.22
TARDBP-222	ENST00000620505	TXNDC2	Q86VQ3	553 aa		13.65	□□□□□ -0.22
TARDBP-222	ENST00000620505	STRCP1	A6NGW2	1772 aa		13.64	□□□□□ -0.23
TARDBP-222	ENST00000620505	KANK1	Q14678	1352 aa		13.64	□□□□□ -0.23
TARDBP-222	ENST00000620505	FAM50A	Q14320	339 aa	Known RBP	13.64	□□□□□ -0.23
TARDBP-222	ENST00000620505	SCAF11	Q99590	1463 aa	Known RBP	13.63	□□□□□ -0.23
TARDBP-222	ENST00000620505	ANKRD30A	Q9BXX3	1397 aa		13.63	□□□□□ -0.23
TARDBP-222	ENST00000620505	STAG3	Q9UJ98	1225 aa		13.63	□□□□□ -0.23
TARDBP-222	ENST00000620505	LRRC7	Q96NW7	1537 aa		13.62	□□□□□ -0.23
TARDBP-222	ENST00000620505	ARHGAP31	Q2M1Z3	1444 aa		13.62	□□□□□ -0.23
TARDBP-222	ENST00000620505	PIK3C2B	O00750	1634 aa		13.61	□□□□□ -0.23
TARDBP-222	ENST00000620505	EID1	Q9Y6B2	187 aa		13.61	□□□□□ -0.23
TARDBP-222	ENST00000620505	ALK	Q9UM73	1620 aa		13.61	□□□□□ -0.23
TARDBP-222	ENST00000620505	POTEH	Q6S545	545 aa		13.6	□□□□□ -0.23
TARDBP-222	ENST00000620505	ARHGAP23	Q9P227	1491 aa		13.6	□□□□□ -0.23
TARDBP-222	ENST00000620505	IDI1	Q13907	227 aa		13.59	□□□□□ -0.23
TARDBP-222	ENST00000620505	SLIT1	O75093	1534 aa		13.59	□□□□□ -0.23
TARDBP-222	ENST00000620505	MED1	Q15648	1581 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-222	ENST00000620505	TMEM2	Q9UHN6	1383 aa		13.58	□□□□□ -0.24
TARDBP-222	ENST00000620505	SYNM	O15061	1565 aa		13.56	□□□□□ -0.24
TARDBP-222	ENST00000620505	EFCAB6	Q5THR3	1501 aa		13.55	□□□□□ -0.24
TARDBP-222	ENST00000620505	LMTK2	Q8IWU2	1503 aa		13.55	□□□□□ -0.24
TARDBP-222	ENST00000620505	RBM33	Q96EV2	1170 aa	Known RBP	13.55	□□□□□ -0.24

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