RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
TARDBP-222ENST00000620505 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
TARDBP-222ENST00000620505 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
TARDBP-222ENST00000620505 ABCC9O60706 1549 aa19.76■□□□□ 0.75
TARDBP-222ENST00000620505 CCDC180Q9P1Z9 1646 aa19.6■□□□□ 0.73
TARDBP-222ENST00000620505 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
TARDBP-222ENST00000620505 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
TARDBP-222ENST00000620505 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
TARDBP-222ENST00000620505 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
TARDBP-222ENST00000620505 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
TARDBP-222ENST00000620505 NACADO15069 1562 aa18.55■□□□□ 0.56
TARDBP-222ENST00000620505 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
TARDBP-222ENST00000620505 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
TARDBP-222ENST00000620505 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
TARDBP-222ENST00000620505 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
TARDBP-222ENST00000620505 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
TARDBP-222ENST00000620505 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
TARDBP-222ENST00000620505 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
TARDBP-222ENST00000620505 SHROOM4Q9ULL8 1493 aa17.82■□□□□ 0.44
TARDBP-222ENST00000620505 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
TARDBP-222ENST00000620505 FOXD1Q16676 465 aa17.77■□□□□ 0.44
TARDBP-222ENST00000620505 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
TARDBP-222ENST00000620505 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
TARDBP-222ENST00000620505 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
TARDBP-222ENST00000620505 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
TARDBP-222ENST00000620505 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
TARDBP-222ENST00000620505 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
TARDBP-222ENST00000620505 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
TARDBP-222ENST00000620505 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
TARDBP-222ENST00000620505 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
TARDBP-222ENST00000620505 HMGXB3Q12766 1538 aa17■□□□□ 0.31
TARDBP-222ENST00000620505 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
TARDBP-222ENST00000620505 NESP48681 1621 aa16.97■□□□□ 0.31
TARDBP-222ENST00000620505 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
TARDBP-222ENST00000620505 CUX2O14529 1486 aa16.94■□□□□ 0.3
TARDBP-222ENST00000620505 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
TARDBP-222ENST00000620505 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
TARDBP-222ENST00000620505 MSH5O43196 834 aa16.85■□□□□ 0.29
TARDBP-222ENST00000620505 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
TARDBP-222ENST00000620505 THOC2Q8NI27 1593 aaKnown RBP16.73■□□□□ 0.27
TARDBP-222ENST00000620505 WIZO95785 1651 aa16.72■□□□□ 0.27
TARDBP-222ENST00000620505 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
TARDBP-222ENST00000620505 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
TARDBP-222ENST00000620505 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.26
TARDBP-222ENST00000620505 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
TARDBP-222ENST00000620505 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-222ENST00000620505 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
TARDBP-222ENST00000620505 WDR62O43379 1518 aa16.49■□□□□ 0.23
TARDBP-222ENST00000620505 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
TARDBP-222ENST00000620505 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
TARDBP-222ENST00000620505 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
TARDBP-222ENST00000620505 CFTRP13569 1480 aa16.43■□□□□ 0.22
TARDBP-222ENST00000620505 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
TARDBP-222ENST00000620505 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
TARDBP-222ENST00000620505 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
TARDBP-222ENST00000620505 PRDM2Q13029 1718 aa16.23■□□□□ 0.19
TARDBP-222ENST00000620505 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
TARDBP-222ENST00000620505 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
TARDBP-222ENST00000620505 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
TARDBP-222ENST00000620505 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
TARDBP-222ENST00000620505 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
TARDBP-222ENST00000620505 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
TARDBP-222ENST00000620505 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
TARDBP-222ENST00000620505 ADRA2BP18089 450 aa16.05■□□□□ 0.16
TARDBP-222ENST00000620505 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
TARDBP-222ENST00000620505 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
TARDBP-222ENST00000620505 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
TARDBP-222ENST00000620505 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
TARDBP-222ENST00000620505 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
TARDBP-222ENST00000620505 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
TARDBP-222ENST00000620505 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
TARDBP-222ENST00000620505 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
TARDBP-222ENST00000620505 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
TARDBP-222ENST00000620505 FBLN2P98095 1184 aa15.98■□□□□ 0.15
TARDBP-222ENST00000620505 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
TARDBP-222ENST00000620505 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
TARDBP-222ENST00000620505 CHD1O14646 1710 aa15.94■□□□□ 0.14
TARDBP-222ENST00000620505 SOGA1O94964 1423 aa15.94■□□□□ 0.14
TARDBP-222ENST00000620505 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
TARDBP-222ENST00000620505 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
TARDBP-222ENST00000620505 CYB5RLQ6IPT4 315 aa15.9■□□□□ 0.14
TARDBP-222ENST00000620505 CUX1P39880 1505 aa15.89■□□□□ 0.13
TARDBP-222ENST00000620505 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
TARDBP-222ENST00000620505 ARAP1Q96P48 1450 aa15.8■□□□□ 0.12
TARDBP-222ENST00000620505 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
TARDBP-222ENST00000620505 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
TARDBP-222ENST00000620505 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
TARDBP-222ENST00000620505 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
TARDBP-222ENST00000620505 MAGI1Q96QZ7 1491 aaPredicted RBP15.75■□□□□ 0.11
TARDBP-222ENST00000620505 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
TARDBP-222ENST00000620505 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
TARDBP-222ENST00000620505 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
TARDBP-222ENST00000620505 SYNJ2O15056 1496 aa15.71■□□□□ 0.11
TARDBP-222ENST00000620505 PBRM1Q86U86 1689 aa15.71■□□□□ 0.11
TARDBP-222ENST00000620505 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
TARDBP-222ENST00000620505 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
TARDBP-222ENST00000620505 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
TARDBP-222ENST00000620505 TOP2BQ02880 1626 aa15.58■□□□□ 0.09
TARDBP-222ENST00000620505 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.09
TARDBP-222ENST00000620505 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms