RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.17□□□□□ -1.15e-8■■■■■ 204.6
TARDBP-222ENST00000620505 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.46□□□□□ -1.221e-41■■■■■ 46.1
TARDBP-222ENST00000620505 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.14□□□□□ -0.791e-13■■■■■ 35.6
TARDBP-222ENST00000620505 CPSF6Q16630 551 aaKnown RBP eCLIP8.04□□□□□ -1.122e-7■■■■■ 27.5
TARDBP-222ENST00000620505 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.43□□□□□ -1.067e-6■■■■■ 27.5
TARDBP-222ENST00000620505 TARDBPQ13148 414 aaKnown RBP eCLIP9□□□□□ -0.971e-13■■■■■ 26.9
TARDBP-222ENST00000620505 KHSRPQ92945 711 aaKnown RBP eCLIP10.08□□□□□ -0.81e-10■■■■□ 25
TARDBP-222ENST00000620505 SRSF7Q16629 238 aaKnown RBP eCLIP6.78□□□□□ -1.322e-10■■■□□ 18.4
TARDBP-222ENST00000620505 GTF2F1P35269 517 aaKnown RBP eCLIP10□□□□□ -0.817e-26■■■□□ 18.2
TARDBP-222ENST00000620505 TIA1P31483 386 aaKnown RBP eCLIP7.9□□□□□ -1.142e-7■■■□□ 17.4
TARDBP-222ENST00000620505 PRPF4O43172 522 aaKnown RBP eCLIP8.3□□□□□ -1.082e-14■■□□□ 12.4
TARDBP-222ENST00000620505 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.85□□□□□ -1.152e-21■■□□□ 12.4
TARDBP-222ENST00000620505 SF3B4Q15427 424 aaKnown RBP eCLIP7.97□□□□□ -1.138e-7■■□□□ 12.3
TARDBP-222ENST00000620505 CDC40O60508 579 aaKnown RBP eCLIP8.2□□□□□ -1.15e-6■■□□□ 12.3
TARDBP-222ENST00000620505 GRSF1Q12849 480 aaKnown RBP eCLIP9.4□□□□□ -0.91e-11■■□□□ 12.1
TARDBP-222ENST00000620505 EIF4G2P78344 907 aaKnown RBP eCLIP12.05□□□□□ -0.488e-11■■□□□ 12.1
TARDBP-222ENST00000620505 FUSP35637 526 aaKnown RBP eCLIP6.06□□□□□ -1.443e-10■■□□□ 12.1
TARDBP-222ENST00000620505 ZC3H11AO75152 810 aaKnown RBP eCLIP9.84□□□□□ -0.831e-7■■□□□ 12
TARDBP-222ENST00000620505 LSM11P83369 360 aaKnown RBP eCLIP9.3□□□□□ -0.923e-9■■□□□ 11.9
TARDBP-222ENST00000620505 TIAL1Q01085 375 aaKnown RBP eCLIP8.24□□□□□ -1.096e-7■■□□□ 11.7
TARDBP-222ENST00000620505 SRSF1Q07955 248 aaKnown RBP eCLIP8.6□□□□□ -1.038e-7■□□□□ 10.8
TARDBP-222ENST00000620505 U2AF2P26368 475 aaKnown RBP eCLIP9.57□□□□□ -0.888e-15■□□□□ 10.4
TARDBP-222ENST00000620505 ZRANB2O95218 330 aaKnown RBP eCLIP8.52□□□□□ -1.054e-10■□□□□ 10.1
TARDBP-222ENST00000620505 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.753e-6■□□□□ 10.1
TARDBP-222ENST00000620505 DDX6P26196 483 aaKnown RBP eCLIP9.39□□□□□ -0.915e-34■□□□□ 10
TARDBP-222ENST00000620505 SUB1P53999 127 aaKnown RBP eCLIP6.35□□□□□ -1.391e-11■□□□□ 9.4
TARDBP-222ENST00000620505 QKIQ96PU8 341 aaKnown RBP eCLIP8.53□□□□□ -1.043e-6■□□□□ 9.1
TARDBP-222ENST00000620505 RBM22Q9NW64 420 aaKnown RBP eCLIP8.7□□□□□ -1.025e-8■□□□□ 9.1
TARDBP-222ENST00000620505 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.96□□□□□ -0.653e-13■□□□□ 8.3
TARDBP-222ENST00000620505 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.83□□□□□ -1.167e-8■□□□□ 8.3
TARDBP-222ENST00000620505 YBX3P16989 372 aaKnown RBP eCLIP12.08□□□□□ -0.488e-13■□□□□ 8.1
Retrieved 31 of 31 RNA–protein pairs in 22.8 ms