RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 UBAP1LF5GYI3 381 aa37.91■■■■□ 3.66
MMP28-203ENST00000612672 CAMSAP2Q08AD1 1489 aa37.9■■■■□ 3.66
MMP28-203ENST00000612672 CCDC141Q6ZP82 1450 aa37.9■■■■□ 3.66
MMP28-203ENST00000612672 KDM5DQ9BY66 1539 aa37.87■■■■□ 3.65
MMP28-203ENST00000612672 FBXO31Q5XUX0 539 aaPredicted RBP37.87■■■■□ 3.65
MMP28-203ENST00000612672 NCOA2Q15596 1464 aa37.87■■■■□ 3.65
MMP28-203ENST00000612672 PZPP20742 1482 aa37.85■■■■□ 3.65
MMP28-203ENST00000612672 TNRQ92752 1358 aa37.83■■■■□ 3.65
MMP28-203ENST00000612672 KIF3BO15066 747 aa37.81■■■■□ 3.64
MMP28-203ENST00000612672 FAM135AQ9P2D6 1515 aa37.8■■■■□ 3.64
MMP28-203ENST00000612672 ARHGEF5Q12774 1597 aa37.76■■■■□ 3.64
MMP28-203ENST00000612672 VWDEQ8N2E2 1590 aa37.72■■■■□ 3.63
MMP28-203ENST00000612672 SHANK2Q9UPX8 1470 aa37.71■■■■□ 3.63
MMP28-203ENST00000612672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.7■■■■□ 3.63
MMP28-203ENST00000612672 CPS1P31327 1500 aa37.7■■■■□ 3.63
MMP28-203ENST00000612672 RNF17Q9BXT8 1623 aaKnown RBP37.69■■■■□ 3.62
MMP28-203ENST00000612672 WASHC2CQ9Y4E1 1318 aa37.67■■■■□ 3.62
MMP28-203ENST00000612672 ALKQ9UM73 1620 aa37.67■■■■□ 3.62
MMP28-203ENST00000612672 MIA2Q96PC5 1412 aa37.66■■■■□ 3.62
MMP28-203ENST00000612672 UGGT1Q9NYU2 1555 aa37.65■■■■□ 3.62
MMP28-203ENST00000612672 DEPDC5O75140 1603 aa37.64■■■■□ 3.62
MMP28-203ENST00000612672 NLRP1Q9C000 1473 aa37.64■■■■□ 3.62
MMP28-203ENST00000612672 HSPA1LP34931 641 aa37.62■■■■□ 3.61
MMP28-203ENST00000612672 STRCP1A6NGW2 1772 aa37.62■■■■□ 3.61
MMP28-203ENST00000612672 ABCC3O15438 1527 aa37.61■■■■□ 3.61
MMP28-203ENST00000612672 MROH1Q8NDA8 1641 aa37.61■■■■□ 3.61
MMP28-203ENST00000612672 MED1Q15648 1581 aaPredicted RBP37.61■■■■□ 3.61
MMP28-203ENST00000612672 MAST1Q9Y2H9 1570 aa37.61■■■■□ 3.61
MMP28-203ENST00000612672 MED14O60244 1454 aa37.6■■■■□ 3.61
MMP28-203ENST00000612672 RSPH4AQ5TD94 716 aa37.59■■■■□ 3.61
MMP28-203ENST00000612672 IQGAP1P46940 1657 aa37.59■■■■□ 3.61
MMP28-203ENST00000612672 ZC3H13Q5T200 1668 aaKnown RBP37.58■■■■□ 3.61
MMP28-203ENST00000612672 PIP4K2BP78356 416 aa37.58■■■■□ 3.61
MMP28-203ENST00000612672 NPHP4O75161 1426 aaPredicted RBP37.57■■■■□ 3.6
MMP28-203ENST00000612672 LRRC9Q6ZRR7 1453 aa37.57■■■■□ 3.6
MMP28-203ENST00000612672 SCAF1Q9H7N4 1312 aaKnown RBP37.57■■■■□ 3.6
MMP28-203ENST00000612672 CEP152O94986 1710 aa37.56■■■■□ 3.6
MMP28-203ENST00000612672 ANKLE2Q86XL3 938 aa37.55■■■■□ 3.6
MMP28-203ENST00000612672 EIF2AK4Q9P2K8 1649 aaKnown RBP37.54■■■■□ 3.6
MMP28-203ENST00000612672 THEMISQ8N1K5 641 aaPredicted RBP37.52■■■■□ 3.6
MMP28-203ENST00000612672 ERVK-7P63135 1459 aa37.51■■■■□ 3.59
MMP28-203ENST00000612672 CFAP65Q6ZU64 1925 aaKnown RBP37.49■■■■□ 3.59
MMP28-203ENST00000612672 TSPY4P0CV99 314 aa37.49■■■■□ 3.59
MMP28-203ENST00000612672 TSPY10P0CW01 314 aa37.49■■■■□ 3.59
MMP28-203ENST00000612672 VPS8Q8N3P4 1428 aa37.47■■■■□ 3.59
MMP28-203ENST00000612672 TOM1O60784 492 aa37.47■■■■□ 3.59
MMP28-203ENST00000612672 UBR1Q8IWV7 1749 aa37.47■■■■□ 3.59
MMP28-203ENST00000612672 KANK4Q5T7N3 995 aaPredicted RBP37.42■■■■□ 3.58
MMP28-203ENST00000612672 LRRC7Q96NW7 1537 aa37.41■■■■□ 3.58
MMP28-203ENST00000612672 SYNMO15061 1565 aa37.38■■■■□ 3.58
MMP28-203ENST00000612672 MYOM3Q5VTT5 1437 aa37.36■■■■□ 3.57
MMP28-203ENST00000612672 CROCC2H7BZ55 1655 aa37.34■■■■□ 3.57
MMP28-203ENST00000612672 DUOX2Q9NRD8 1548 aa37.33■■■■□ 3.57
MMP28-203ENST00000612672 MAP3K1Q13233 1512 aa37.32■■■■□ 3.57
MMP28-203ENST00000612672 XIRP1Q702N8 1843 aaKnown RBP37.31■■■■□ 3.56
MMP28-203ENST00000612672 PRDM15P57071 1507 aaPredicted RBP37.31■■■■□ 3.56
MMP28-203ENST00000612672 LOC105371045A0A1W2PR82 267 aa37.3■■■■□ 3.56
MMP28-203ENST00000612672 ARHGAP23Q9P227 1491 aa37.28■■■■□ 3.56
MMP28-203ENST00000612672 SCAF11Q99590 1463 aaKnown RBP37.27■■■■□ 3.56
MMP28-203ENST00000612672 SLIT1O75093 1534 aa37.26■■■■□ 3.55
MMP28-203ENST00000612672 SENP3Q9H4L4 574 aaPredicted RBP37.25■■■■□ 3.55
MMP28-203ENST00000612672 PIK3C2BO00750 1634 aa37.23■■■■□ 3.55
MMP28-203ENST00000612672 LTKP29376 864 aa37.23■■■■□ 3.55
MMP28-203ENST00000612672 KIF15Q9NS87 1388 aa37.21■■■■□ 3.55
MMP28-203ENST00000612672 ABCC5O15440 1437 aa37.2■■■■□ 3.55
MMP28-203ENST00000612672 ARHGAP31Q2M1Z3 1444 aa37.2■■■■□ 3.55
MMP28-203ENST00000612672 PTPN23Q9H3S7 1636 aa37.19■■■■□ 3.54
MMP28-203ENST00000612672 ERBINQ96RT1 1412 aa37.17■■■■□ 3.54
MMP28-203ENST00000612672 TXNDC2Q86VQ3 553 aa37.11■■■■□ 3.53
MMP28-203ENST00000612672 RRP7BPQ9NSQ0 103 aa37.11■■■■□ 3.53
MMP28-203ENST00000612672 PHF23Q9BUL5 403 aaPredicted RBP37.09■■■■□ 3.53
MMP28-203ENST00000612672 DAPK1P53355 1430 aa37.09■■■■□ 3.53
MMP28-203ENST00000612672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.05■■■■□ 3.52
MMP28-203ENST00000612672 KDM5AP29375 1690 aaKnown RBP37.04■■■■□ 3.52
MMP28-203ENST00000612672 TMEM2Q9UHN6 1383 aa37.04■■■■□ 3.52
MMP28-203ENST00000612672 LMTK2Q8IWU2 1503 aa37.02■■■■□ 3.52
MMP28-203ENST00000612672 EFCAB6Q5THR3 1501 aa37■■■■□ 3.51
MMP28-203ENST00000612672 FGD6Q6ZV73 1430 aa36.99■■■■□ 3.51
MMP28-203ENST00000612672 TET3O43151 1660 aa36.98■■■■□ 3.51
MMP28-203ENST00000612672 RGS17Q9UGC6 210 aaPredicted RBP36.97■■■■□ 3.51
MMP28-203ENST00000612672 EID1Q9Y6B2 187 aa36.95■■■■□ 3.51
MMP28-203ENST00000612672 IDI1Q13907 227 aa36.93■■■■□ 3.5
MMP28-203ENST00000612672 ADGRB3O60242 1522 aa36.92■■■■□ 3.5
MMP28-203ENST00000612672 CHIC2Q9UKJ5 165 aa36.92■■■■□ 3.5
MMP28-203ENST00000612672 TMEM94Q12767 1356 aa36.91■■■■□ 3.5
MMP28-203ENST00000612672 KANK1Q14678 1352 aa36.91■■■■□ 3.5
MMP28-203ENST00000612672 NOS1P29475 1434 aa36.91■■■■□ 3.5
MMP28-203ENST00000612672 ROBO1Q9Y6N7 1651 aa36.9■■■■□ 3.5
MMP28-203ENST00000612672 NWD1Q149M9 1564 aa36.88■■■■□ 3.49
MMP28-203ENST00000612672 FAM135BQ49AJ0 1406 aa36.88■■■■□ 3.49
MMP28-203ENST00000612672 MYO5BQ9ULV0 1848 aa36.87■■■■□ 3.49
MMP28-203ENST00000612672 RBM33Q96EV2 1170 aaKnown RBP36.86■■■■□ 3.49
MMP28-203ENST00000612672 ANKRD30AQ9BXX3 1397 aa36.86■■■■□ 3.49
MMP28-203ENST00000612672 SLC26A8Q96RN1 970 aa36.85■■■■□ 3.49
MMP28-203ENST00000612672 STAG3Q9UJ98 1225 aa36.85■■■■□ 3.49
MMP28-203ENST00000612672 ADGRL2O95490 1459 aa36.82■■■■□ 3.48
MMP28-203ENST00000612672 KCNA6P17658 529 aa36.81■■■■□ 3.48
MMP28-203ENST00000612672 NKTRP30414 1462 aaKnown RBP36.77■■■■□ 3.48
MMP28-203ENST00000612672 GCC2Q8IWJ2 1684 aa36.77■■■■□ 3.48
MMP28-203ENST00000612672 PROSER2Q86WR7 435 aaPredicted RBP36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms