RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 KIF3BO15066 747 aa33.39■■■□□ 2.94
VIM-AS1-202ENST00000605833 ILDR2Q71H61 639 aa33.39■■■□□ 2.94
VIM-AS1-202ENST00000605833 POLR1AO95602 1720 aaPredicted RBP33.37■■■□□ 2.93
VIM-AS1-202ENST00000605833 ARHGEF5Q12774 1597 aa33.35■■■□□ 2.93
VIM-AS1-202ENST00000605833 FBXO31Q5XUX0 539 aaPredicted RBP33.35■■■□□ 2.93
VIM-AS1-202ENST00000605833 PZPP20742 1482 aa33.34■■■□□ 2.93
VIM-AS1-202ENST00000605833 TNRQ92752 1358 aa33.34■■■□□ 2.93
VIM-AS1-202ENST00000605833 FAM135AQ9P2D6 1515 aa33.33■■■□□ 2.93
VIM-AS1-202ENST00000605833 NEURL4Q96JN8 1562 aa33.31■■■□□ 2.92
VIM-AS1-202ENST00000605833 UBAP1LF5GYI3 381 aa33.29■■■□□ 2.92
VIM-AS1-202ENST00000605833 LRRC9Q6ZRR7 1453 aa33.27■■■□□ 2.92
VIM-AS1-202ENST00000605833 WASHC2CQ9Y4E1 1318 aa33.27■■■□□ 2.92
VIM-AS1-202ENST00000605833 RSPH4AQ5TD94 716 aa33.25■■■□□ 2.91
VIM-AS1-202ENST00000605833 VPS8Q8N3P4 1428 aa33.25■■■□□ 2.91
VIM-AS1-202ENST00000605833 RNF17Q9BXT8 1623 aaKnown RBP33.22■■■□□ 2.91
VIM-AS1-202ENST00000605833 MAST1Q9Y2H9 1570 aa33.21■■■□□ 2.91
VIM-AS1-202ENST00000605833 TSPY4P0CV99 314 aa33.2■■■□□ 2.91
VIM-AS1-202ENST00000605833 TSPY10P0CW01 314 aa33.2■■■□□ 2.91
VIM-AS1-202ENST00000605833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.19■■■□□ 2.95e-6■■□□□ 13.9
VIM-AS1-202ENST00000605833 MIA2Q96PC5 1412 aa33.17■■■□□ 2.9
VIM-AS1-202ENST00000605833 NLRP1Q9C000 1473 aa33.17■■■□□ 2.9
VIM-AS1-202ENST00000605833 UGGT1Q9NYU2 1555 aa33.17■■■□□ 2.9
VIM-AS1-202ENST00000605833 ZC3H13Q5T200 1668 aaKnown RBP33.17■■■□□ 2.9
VIM-AS1-202ENST00000605833 LOC105371045A0A1W2PR82 267 aa33.16■■■□□ 2.9
VIM-AS1-202ENST00000605833 ABCC3O15438 1527 aa33.16■■■□□ 2.9
VIM-AS1-202ENST00000605833 SOCS7O14512 581 aa33.14■■■□□ 2.9
VIM-AS1-202ENST00000605833 EIF2AK4Q9P2K8 1649 aaKnown RBP33.13■■■□□ 2.89
VIM-AS1-202ENST00000605833 CPS1P31327 1500 aa33.13■■■□□ 2.89
VIM-AS1-202ENST00000605833 SHANK2Q9UPX8 1470 aa33.12■■■□□ 2.89
VIM-AS1-202ENST00000605833 CEP152O94986 1710 aa33.12■■■□□ 2.89
VIM-AS1-202ENST00000605833 KANK4Q5T7N3 995 aaPredicted RBP33.12■■■□□ 2.89
VIM-AS1-202ENST00000605833 MROH1Q8NDA8 1641 aa33.12■■■□□ 2.89
VIM-AS1-202ENST00000605833 VWDEQ8N2E2 1590 aa33.11■■■□□ 2.89
VIM-AS1-202ENST00000605833 DEPDC5O75140 1603 aa33.1■■■□□ 2.89
VIM-AS1-202ENST00000605833 ANKLE2Q86XL3 938 aa33.08■■■□□ 2.89
VIM-AS1-202ENST00000605833 MYOM3Q5VTT5 1437 aa33.08■■■□□ 2.89
VIM-AS1-202ENST00000605833 IQGAP1P46940 1657 aa33.07■■■□□ 2.89
VIM-AS1-202ENST00000605833 THEMISQ8N1K5 641 aaPredicted RBP33.07■■■□□ 2.88
VIM-AS1-202ENST00000605833 MAP3K1Q13233 1512 aa33.07■■■□□ 2.88
VIM-AS1-202ENST00000605833 SCAF1Q9H7N4 1312 aaKnown RBP33.06■■■□□ 2.88
VIM-AS1-202ENST00000605833 NPHP4O75161 1426 aaPredicted RBP33.06■■■□□ 2.88
VIM-AS1-202ENST00000605833 ERVK-7P63135 1459 aa33.05■■■□□ 2.88
VIM-AS1-202ENST00000605833 MED14O60244 1454 aa33.04■■■□□ 2.88
VIM-AS1-202ENST00000605833 CFAP65Q6ZU64 1925 aaKnown RBP33.04■■■□□ 2.88
VIM-AS1-202ENST00000605833 PIP4K2BP78356 416 aa33.03■■■□□ 2.88
VIM-AS1-202ENST00000605833 CROCC2H7BZ55 1655 aa33.01■■■□□ 2.88
VIM-AS1-202ENST00000605833 DUOX2Q9NRD8 1548 aa32.99■■■□□ 2.87
VIM-AS1-202ENST00000605833 STRCP1A6NGW2 1772 aa32.98■■■□□ 2.87
VIM-AS1-202ENST00000605833 UBR1Q8IWV7 1749 aa32.97■■■□□ 2.87
VIM-AS1-202ENST00000605833 HSPA1LP34931 641 aa32.97■■■□□ 2.87
VIM-AS1-202ENST00000605833 ALKQ9UM73 1620 aa32.95■■■□□ 2.86
VIM-AS1-202ENST00000605833 TOM1O60784 492 aa32.94■■■□□ 2.86
VIM-AS1-202ENST00000605833 PRDM15P57071 1507 aaPredicted RBP32.92■■■□□ 2.86
VIM-AS1-202ENST00000605833 PTPN23Q9H3S7 1636 aa32.92■■■□□ 2.86
VIM-AS1-202ENST00000605833 MED1Q15648 1581 aaPredicted RBP32.92■■■□□ 2.86
VIM-AS1-202ENST00000605833 KIF15Q9NS87 1388 aa32.91■■■□□ 2.86
VIM-AS1-202ENST00000605833 ABCC5O15440 1437 aa32.88■■■□□ 2.85
VIM-AS1-202ENST00000605833 SYNMO15061 1565 aa32.87■■■□□ 2.85
VIM-AS1-202ENST00000605833 ERBINQ96RT1 1412 aa32.85■■■□□ 2.85
VIM-AS1-202ENST00000605833 LRRC7Q96NW7 1537 aa32.85■■■□□ 2.85
VIM-AS1-202ENST00000605833 RRP7BPQ9NSQ0 103 aa32.84■■■□□ 2.85
VIM-AS1-202ENST00000605833 SCAF11Q99590 1463 aaKnown RBP32.84■■■□□ 2.85
VIM-AS1-202ENST00000605833 DAPK1P53355 1430 aa32.81■■■□□ 2.84
VIM-AS1-202ENST00000605833 PIK3C2BO00750 1634 aa32.8■■■□□ 2.84
VIM-AS1-202ENST00000605833 ARHGAP31Q2M1Z3 1444 aa32.8■■■□□ 2.84
VIM-AS1-202ENST00000605833 ARHGAP23Q9P227 1491 aa32.79■■■□□ 2.84
VIM-AS1-202ENST00000605833 SLIT1O75093 1534 aa32.78■■■□□ 2.84
VIM-AS1-202ENST00000605833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.78■■■□□ 2.84
VIM-AS1-202ENST00000605833 FGD6Q6ZV73 1430 aa32.77■■■□□ 2.84
VIM-AS1-202ENST00000605833 SENP3Q9H4L4 574 aaPredicted RBP32.76■■■□□ 2.83
VIM-AS1-202ENST00000605833 LTKP29376 864 aa32.75■■■□□ 2.83
VIM-AS1-202ENST00000605833 APLP2Q06481 763 aa32.73■■■□□ 2.83
VIM-AS1-202ENST00000605833 XIRP1Q702N8 1843 aaKnown RBP32.72■■■□□ 2.83
VIM-AS1-202ENST00000605833 TXNDC2Q86VQ3 553 aa32.71■■■□□ 2.83
VIM-AS1-202ENST00000605833 CHIC2Q9UKJ5 165 aa32.7■■■□□ 2.83
VIM-AS1-202ENST00000605833 KANK1Q14678 1352 aa32.69■■■□□ 2.82
VIM-AS1-202ENST00000605833 LMTK2Q8IWU2 1503 aa32.66■■■□□ 2.82
VIM-AS1-202ENST00000605833 ANKRD30AQ9BXX3 1397 aa32.65■■■□□ 2.82
VIM-AS1-202ENST00000605833 EFCAB6Q5THR3 1501 aa32.64■■■□□ 2.82
VIM-AS1-202ENST00000605833 TMEM2Q9UHN6 1383 aa32.64■■■□□ 2.82
VIM-AS1-202ENST00000605833 EID1Q9Y6B2 187 aa32.64■■■□□ 2.82
VIM-AS1-202ENST00000605833 KDM5AP29375 1690 aaKnown RBP32.63■■■□□ 2.81
VIM-AS1-202ENST00000605833 STAG3Q9UJ98 1225 aa32.61■■■□□ 2.81
VIM-AS1-202ENST00000605833 PHF23Q9BUL5 403 aaPredicted RBP32.59■■■□□ 2.81
VIM-AS1-202ENST00000605833 IDI1Q13907 227 aa32.56■■■□□ 2.8
VIM-AS1-202ENST00000605833 ADGRB3O60242 1522 aa32.56■■■□□ 2.8
VIM-AS1-202ENST00000605833 ADGRL2O95490 1459 aa32.54■■■□□ 2.8
VIM-AS1-202ENST00000605833 NOS1P29475 1434 aa32.53■■■□□ 2.8
VIM-AS1-202ENST00000605833 TET3O43151 1660 aa32.5■■■□□ 2.79
VIM-AS1-202ENST00000605833 FAM50AQ14320 339 aaKnown RBP32.48■■■□□ 2.79
VIM-AS1-202ENST00000605833 MYO5BQ9ULV0 1848 aa32.48■■■□□ 2.79
VIM-AS1-202ENST00000605833 TMEM94Q12767 1356 aa32.47■■■□□ 2.79
VIM-AS1-202ENST00000605833 SLC26A8Q96RN1 970 aa32.47■■■□□ 2.79
VIM-AS1-202ENST00000605833 GCC2Q8IWJ2 1684 aa32.44■■■□□ 2.78
VIM-AS1-202ENST00000605833 ANKRD50Q9ULJ7 1429 aa32.43■■■□□ 2.78
VIM-AS1-202ENST00000605833 RBM33Q96EV2 1170 aaKnown RBP32.43■■■□□ 2.78
VIM-AS1-202ENST00000605833 NWD1Q149M9 1564 aa32.43■■■□□ 2.78
VIM-AS1-202ENST00000605833 ROBO1Q9Y6N7 1651 aa32.41■■■□□ 2.78
VIM-AS1-202ENST00000605833 KCNA6P17658 529 aa32.41■■■□□ 2.78
VIM-AS1-202ENST00000605833 RPRD2Q5VT52 1461 aaKnown RBP32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms