RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
PTBP1-208ENST00000585956 PKD2Q13563 968 aa31.35■■■□□ 2.61
PTBP1-208ENST00000585956 KDM5DQ9BY66 1539 aa31.34■■■□□ 2.61
PTBP1-208ENST00000585956 NEURL4Q96JN8 1562 aa31.34■■■□□ 2.61
PTBP1-208ENST00000585956 ARHGEF5Q12774 1597 aa31.33■■■□□ 2.61
PTBP1-208ENST00000585956 PZPP20742 1482 aa31.33■■■□□ 2.61
PTBP1-208ENST00000585956 TNRQ92752 1358 aa31.31■■■□□ 2.6
PTBP1-208ENST00000585956 LRRC9Q6ZRR7 1453 aa31.31■■■□□ 2.6
PTBP1-208ENST00000585956 SPATA31D1Q6ZQQ2 1576 aa31.3■■■□□ 2.6
PTBP1-208ENST00000585956 KANK4Q5T7N3 995 aaPredicted RBP31.28■■■□□ 2.6
PTBP1-208ENST00000585956 VPS8Q8N3P4 1428 aa31.28■■■□□ 2.6
PTBP1-208ENST00000585956 POLR1AO95602 1720 aaPredicted RBP31.27■■■□□ 2.6
PTBP1-208ENST00000585956 WASHC2CQ9Y4E1 1318 aa31.24■■■□□ 2.59
PTBP1-208ENST00000585956 UBAP1LF5GYI3 381 aa31.23■■■□□ 2.59
PTBP1-208ENST00000585956 FAM135AQ9P2D6 1515 aa31.23■■■□□ 2.59
PTBP1-208ENST00000585956 RNF17Q9BXT8 1623 aaKnown RBP31.21■■■□□ 2.59
PTBP1-208ENST00000585956 RSPH4AQ5TD94 716 aa31.21■■■□□ 2.59
PTBP1-208ENST00000585956 MAST1Q9Y2H9 1570 aa31.21■■■□□ 2.59
PTBP1-208ENST00000585956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.2■■■□□ 2.592e-9■■■□□ 18.7
PTBP1-208ENST00000585956 MROH1Q8NDA8 1641 aa31.2■■■□□ 2.58
PTBP1-208ENST00000585956 MIA2Q96PC5 1412 aa31.19■■■□□ 2.58
PTBP1-208ENST00000585956 ABCC3O15438 1527 aa31.18■■■□□ 2.58
PTBP1-208ENST00000585956 TSPY4P0CV99 314 aa31.15■■■□□ 2.58
PTBP1-208ENST00000585956 TSPY10P0CW01 314 aa31.15■■■□□ 2.58
PTBP1-208ENST00000585956 VWDEQ8N2E2 1590 aa31.14■■■□□ 2.58
PTBP1-208ENST00000585956 UGGT1Q9NYU2 1555 aa31.13■■■□□ 2.57
PTBP1-208ENST00000585956 NLRP1Q9C000 1473 aa31.12■■■□□ 2.57
PTBP1-208ENST00000585956 SHANK2Q9UPX8 1470 aa31.11■■■□□ 2.57
PTBP1-208ENST00000585956 CEP152O94986 1710 aa31.1■■■□□ 2.57
PTBP1-208ENST00000585956 MYOM3Q5VTT5 1437 aa31.1■■■□□ 2.57
PTBP1-208ENST00000585956 MAP3K1Q13233 1512 aa31.09■■■□□ 2.57
PTBP1-208ENST00000585956 EIF2AK4Q9P2K8 1649 aaKnown RBP31.09■■■□□ 2.57
PTBP1-208ENST00000585956 SOCS7O14512 581 aa31.08■■■□□ 2.57
PTBP1-208ENST00000585956 ZC3H13Q5T200 1668 aaKnown RBP31.07■■■□□ 2.56
PTBP1-208ENST00000585956 ALKQ9UM73 1620 aa31.07■■■□□ 2.56
PTBP1-208ENST00000585956 ERVK-7P63135 1459 aa31.07■■■□□ 2.56
PTBP1-208ENST00000585956 DEPDC5O75140 1603 aa31.06■■■□□ 2.56
PTBP1-208ENST00000585956 STRCP1A6NGW2 1772 aa31.06■■■□□ 2.56
PTBP1-208ENST00000585956 MED14O60244 1454 aa31.06■■■□□ 2.56
PTBP1-208ENST00000585956 NPHP4O75161 1426 aaPredicted RBP31.06■■■□□ 2.56
PTBP1-208ENST00000585956 CPS1P31327 1500 aa31.05■■■□□ 2.56
PTBP1-208ENST00000585956 CFAP65Q6ZU64 1925 aaKnown RBP31.05■■■□□ 2.56
PTBP1-208ENST00000585956 ANKLE2Q86XL3 938 aa31.05■■■□□ 2.56
PTBP1-208ENST00000585956 THEMISQ8N1K5 641 aaPredicted RBP31.02■■■□□ 2.56
PTBP1-208ENST00000585956 IQGAP1P46940 1657 aa31.02■■■□□ 2.56
PTBP1-208ENST00000585956 HSPA1LP34931 641 aa31■■■□□ 2.55
PTBP1-208ENST00000585956 PIP4K2BP78356 416 aa31■■■□□ 2.55
PTBP1-208ENST00000585956 CROCC2H7BZ55 1655 aa31■■■□□ 2.55
PTBP1-208ENST00000585956 ABCC5O15440 1437 aa30.98■■■□□ 2.55
PTBP1-208ENST00000585956 DUOX2Q9NRD8 1548 aa30.98■■■□□ 2.55
PTBP1-208ENST00000585956 UBR1Q8IWV7 1749 aa30.98■■■□□ 2.55
PTBP1-208ENST00000585956 SCAF1Q9H7N4 1312 aaKnown RBP30.96■■■□□ 2.55
PTBP1-208ENST00000585956 PTPN23Q9H3S7 1636 aa30.95■■■□□ 2.54
PTBP1-208ENST00000585956 PRDM15P57071 1507 aaPredicted RBP30.93■■■□□ 2.54
PTBP1-208ENST00000585956 KIF15Q9NS87 1388 aa30.93■■■□□ 2.54
PTBP1-208ENST00000585956 RRP7BPQ9NSQ0 103 aa30.91■■■□□ 2.54
PTBP1-208ENST00000585956 LRRC7Q96NW7 1537 aa30.89■■■□□ 2.54
PTBP1-208ENST00000585956 MED1Q15648 1581 aaPredicted RBP30.88■■■□□ 2.53
PTBP1-208ENST00000585956 DAPK1P53355 1430 aa30.87■■■□□ 2.53
PTBP1-208ENST00000585956 TOM1O60784 492 aa30.86■■■□□ 2.53
PTBP1-208ENST00000585956 LTKP29376 864 aa30.86■■■□□ 2.53
PTBP1-208ENST00000585956 ARHGAP23Q9P227 1491 aa30.85■■■□□ 2.53
PTBP1-208ENST00000585956 ERBINQ96RT1 1412 aa30.85■■■□□ 2.53
PTBP1-208ENST00000585956 ARHGAP31Q2M1Z3 1444 aa30.84■■■□□ 2.53
PTBP1-208ENST00000585956 SCAF11Q99590 1463 aaKnown RBP30.82■■■□□ 2.53
PTBP1-208ENST00000585956 FGD6Q6ZV73 1430 aa30.82■■■□□ 2.52
PTBP1-208ENST00000585956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.82■■■□□ 2.524e-7■■■■□ 22.7
PTBP1-208ENST00000585956 PIK3C2BO00750 1634 aa30.82■■■□□ 2.52
PTBP1-208ENST00000585956 SLIT1O75093 1534 aa30.82■■■□□ 2.52
PTBP1-208ENST00000585956 SYNMO15061 1565 aa30.79■■■□□ 2.52
PTBP1-208ENST00000585956 XIRP1Q702N8 1843 aaKnown RBP30.78■■■□□ 2.52
PTBP1-208ENST00000585956 SENP3Q9H4L4 574 aaPredicted RBP30.78■■■□□ 2.52
PTBP1-208ENST00000585956 CHIC2Q9UKJ5 165 aa30.78■■■□□ 2.52
PTBP1-208ENST00000585956 TXNDC2Q86VQ3 553 aa30.74■■■□□ 2.51
PTBP1-208ENST00000585956 LMTK2Q8IWU2 1503 aa30.71■■■□□ 2.51
PTBP1-208ENST00000585956 TMEM2Q9UHN6 1383 aa30.68■■■□□ 2.5
PTBP1-208ENST00000585956 IDI1Q13907 227 aa30.66■■■□□ 2.5
PTBP1-208ENST00000585956 ANKRD30AQ9BXX3 1397 aa30.66■■■□□ 2.5
PTBP1-208ENST00000585956 EFCAB6Q5THR3 1501 aa30.64■■■□□ 2.5
PTBP1-208ENST00000585956 APLP2Q06481 763 aa30.64■■■□□ 2.5
PTBP1-208ENST00000585956 NOS1P29475 1434 aa30.63■■■□□ 2.49
PTBP1-208ENST00000585956 KANK1Q14678 1352 aa30.62■■■□□ 2.49
PTBP1-208ENST00000585956 ADGRL2O95490 1459 aa30.62■■■□□ 2.49
PTBP1-208ENST00000585956 TET3O43151 1660 aa30.61■■■□□ 2.49
PTBP1-208ENST00000585956 KDM5AP29375 1690 aaKnown RBP30.61■■■□□ 2.49
PTBP1-208ENST00000585956 EID1Q9Y6B2 187 aa30.58■■■□□ 2.49
PTBP1-208ENST00000585956 RBM33Q96EV2 1170 aaKnown RBP30.57■■■□□ 2.48
PTBP1-208ENST00000585956 ADGRB3O60242 1522 aa30.57■■■□□ 2.48
PTBP1-208ENST00000585956 SLC26A8Q96RN1 970 aa30.55■■■□□ 2.48
PTBP1-208ENST00000585956 STAG3Q9UJ98 1225 aa30.54■■■□□ 2.48
PTBP1-208ENST00000585956 MYO5BQ9ULV0 1848 aa30.53■■■□□ 2.48
PTBP1-208ENST00000585956 FAM50AQ14320 339 aaKnown RBP30.52■■■□□ 2.48
PTBP1-208ENST00000585956 TMEM94Q12767 1356 aa30.52■■■□□ 2.48
PTBP1-208ENST00000585956 ANKRD50Q9ULJ7 1429 aa30.49■■■□□ 2.47
PTBP1-208ENST00000585956 PHF23Q9BUL5 403 aaPredicted RBP30.47■■■□□ 2.47
PTBP1-208ENST00000585956 RGS17Q9UGC6 210 aaPredicted RBP30.47■■■□□ 2.47
PTBP1-208ENST00000585956 NWD1Q149M9 1564 aa30.46■■■□□ 2.47
PTBP1-208ENST00000585956 KCNA6P17658 529 aa30.46■■■□□ 2.47
PTBP1-208ENST00000585956 ZFYVE9O95405 1425 aa30.45■■■□□ 2.46
PTBP1-208ENST00000585956 GCC2Q8IWJ2 1684 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms