RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 NCOA2Q15596 1464 aa6.11□□□□□ -1.43
NUP85-209ENST00000578987 WASHC2CQ9Y4E1 1318 aa6.11□□□□□ -1.43
NUP85-209ENST00000578987 TSPY4P0CV99 314 aa6.11□□□□□ -1.43
NUP85-209ENST00000578987 TSPY10P0CW01 314 aa6.11□□□□□ -1.43
NUP85-209ENST00000578987 KCNA4P22459 653 aa6.11□□□□□ -1.43
NUP85-209ENST00000578987 PKD2Q13563 968 aa6.11□□□□□ -1.43
NUP85-209ENST00000578987 SENP3Q9H4L4 574 aaPredicted RBP6.11□□□□□ -1.43
NUP85-209ENST00000578987 CEP152O94986 1710 aa6.11□□□□□ -1.43
NUP85-209ENST00000578987 RTEL1-TNFRSF6BF6WH68 1400 aa6.1□□□□□ -1.43
NUP85-209ENST00000578987 SCAF1Q9H7N4 1312 aaKnown RBP6.1□□□□□ -1.43
NUP85-209ENST00000578987 PIP4K2BP78356 416 aa6.1□□□□□ -1.43
NUP85-209ENST00000578987 PPP6R1Q9UPN7 881 aa6.1□□□□□ -1.43
NUP85-209ENST00000578987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.09□□□□□ -1.43
NUP85-209ENST00000578987 STRCP1A6NGW2 1772 aa6.09□□□□□ -1.43
NUP85-209ENST00000578987 RSPH4AQ5TD94 716 aa6.09□□□□□ -1.43
NUP85-209ENST00000578987 A2ML1A8K2U0 1454 aa6.09□□□□□ -1.44
NUP85-209ENST00000578987 TCOF1Q13428 1488 aaKnown RBP6.09□□□□□ -1.44
NUP85-209ENST00000578987 CCDC141Q6ZP82 1450 aa6.09□□□□□ -1.44
NUP85-209ENST00000578987 TNRQ92752 1358 aa6.08□□□□□ -1.44
NUP85-209ENST00000578987 ANKLE2Q86XL3 938 aa6.08□□□□□ -1.44
NUP85-209ENST00000578987 SPATA31D1Q6ZQQ2 1576 aa6.08□□□□□ -1.44
NUP85-209ENST00000578987 NEURL4Q96JN8 1562 aa6.08□□□□□ -1.44
NUP85-209ENST00000578987 LRRC9Q6ZRR7 1453 aa6.08□□□□□ -1.44
NUP85-209ENST00000578987 ARHGEF5Q12774 1597 aa6.07□□□□□ -1.44
NUP85-209ENST00000578987 SOCS7O14512 581 aa6.07□□□□□ -1.44
NUP85-209ENST00000578987 HSPA1LP34931 641 aa6.07□□□□□ -1.44
NUP85-209ENST00000578987 THEMISQ8N1K5 641 aaPredicted RBP6.07□□□□□ -1.44
NUP85-209ENST00000578987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.07□□□□□ -1.44
NUP85-209ENST00000578987 RRP7BPQ9NSQ0 103 aa6.07□□□□□ -1.44
NUP85-209ENST00000578987 KDM5DQ9BY66 1539 aa6.07□□□□□ -1.44
NUP85-209ENST00000578987 PLA2R1Q13018 1463 aa6.07□□□□□ -1.44
NUP85-209ENST00000578987 IQSEC2Q5JU85 1478 aa6.07□□□□□ -1.44
NUP85-209ENST00000578987 MIA2Q96PC5 1412 aa6.07□□□□□ -1.44
NUP85-209ENST00000578987 UGGT1Q9NYU2 1555 aa6.06□□□□□ -1.44
NUP85-209ENST00000578987 CHIC2Q9UKJ5 165 aa6.06□□□□□ -1.44
NUP85-209ENST00000578987 PZPP20742 1482 aa6.06□□□□□ -1.44
NUP85-209ENST00000578987 SHANK2Q9UPX8 1470 aa6.06□□□□□ -1.44
NUP85-209ENST00000578987 VPS8Q8N3P4 1428 aa6.06□□□□□ -1.44
NUP85-209ENST00000578987 UBR1Q8IWV7 1749 aa6.05□□□□□ -1.44
NUP85-209ENST00000578987 IQGAP1P46940 1657 aa6.05□□□□□ -1.44
NUP85-209ENST00000578987 XIRP1Q702N8 1843 aaKnown RBP6.05□□□□□ -1.44
NUP85-209ENST00000578987 TOM1O60784 492 aa6.05□□□□□ -1.44
NUP85-209ENST00000578987 MROH1Q8NDA8 1641 aa6.04□□□□□ -1.44
NUP85-209ENST00000578987 RNF17Q9BXT8 1623 aaKnown RBP6.04□□□□□ -1.44
NUP85-209ENST00000578987 LTKP29376 864 aa6.04□□□□□ -1.44
NUP85-209ENST00000578987 NPHP4O75161 1426 aaPredicted RBP6.04□□□□□ -1.44
NUP85-209ENST00000578987 VWDEQ8N2E2 1590 aa6.04□□□□□ -1.44
NUP85-209ENST00000578987 MAST1Q9Y2H9 1570 aa6.04□□□□□ -1.44
NUP85-209ENST00000578987 ABCC3O15438 1527 aa6.04□□□□□ -1.44
NUP85-209ENST00000578987 FAM135AQ9P2D6 1515 aa6.04□□□□□ -1.44
NUP85-209ENST00000578987 MYO5BQ9ULV0 1848 aa6.04□□□□□ -1.44
NUP85-209ENST00000578987 DEPDC5O75140 1603 aa6.03□□□□□ -1.44
NUP85-209ENST00000578987 PTPN23Q9H3S7 1636 aa6.03□□□□□ -1.44
NUP85-209ENST00000578987 APLP2Q06481 763 aa6.03□□□□□ -1.44
NUP85-209ENST00000578987 TXNDC2Q86VQ3 553 aa6.03□□□□□ -1.44
NUP85-209ENST00000578987 CROCC2H7BZ55 1655 aa6.03□□□□□ -1.44
NUP85-209ENST00000578987 ZC3H13Q5T200 1668 aaKnown RBP6.03□□□□□ -1.44
NUP85-209ENST00000578987 EIF2AK4Q9P2K8 1649 aaKnown RBP6.03□□□□□ -1.44
NUP85-209ENST00000578987 ALKQ9UM73 1620 aa6.03□□□□□ -1.44
NUP85-209ENST00000578987 ERVK-7P63135 1459 aa6.02□□□□□ -1.44
NUP85-209ENST00000578987 NLRP1Q9C000 1473 aa6.02□□□□□ -1.44
NUP85-209ENST00000578987 ABCC5O15440 1437 aa6.02□□□□□ -1.45
NUP85-209ENST00000578987 MYOM3Q5VTT5 1437 aa6.02□□□□□ -1.45
NUP85-209ENST00000578987 RBM33Q96EV2 1170 aaKnown RBP6.02□□□□□ -1.45
NUP85-209ENST00000578987 CPS1P31327 1500 aa6.02□□□□□ -1.45
NUP85-209ENST00000578987 PIK3C2BO00750 1634 aa6.02□□□□□ -1.45
NUP85-209ENST00000578987 MED14O60244 1454 aa6.02□□□□□ -1.45
NUP85-209ENST00000578987 DUOX2Q9NRD8 1548 aa6.01□□□□□ -1.45
NUP85-209ENST00000578987 IDI1Q13907 227 aa6.01□□□□□ -1.45
NUP85-209ENST00000578987 STAG3Q9UJ98 1225 aa6.01□□□□□ -1.45
NUP85-209ENST00000578987 KIF15Q9NS87 1388 aa6.01□□□□□ -1.45
NUP85-209ENST00000578987 MED1Q15648 1581 aaPredicted RBP6.01□□□□□ -1.45
NUP85-209ENST00000578987 MAP3K1Q13233 1512 aa6□□□□□ -1.45
NUP85-209ENST00000578987 LRRC7Q96NW7 1537 aa6□□□□□ -1.45
NUP85-209ENST00000578987 FAM50AQ14320 339 aaKnown RBP6□□□□□ -1.45
NUP85-209ENST00000578987 PPARGC1BQ86YN6 1023 aaKnown RBP6□□□□□ -1.45
NUP85-209ENST00000578987 SLC26A8Q96RN1 970 aa6□□□□□ -1.45
NUP85-209ENST00000578987 DAPK1P53355 1430 aa5.99□□□□□ -1.45
NUP85-209ENST00000578987 BCANQ96GW7 911 aa5.99□□□□□ -1.45
NUP85-209ENST00000578987 EID1Q9Y6B2 187 aa5.99□□□□□ -1.45
NUP85-209ENST00000578987 SCAF11Q99590 1463 aaKnown RBP5.98□□□□□ -1.45
NUP85-209ENST00000578987 KANK1Q14678 1352 aa5.98□□□□□ -1.45
NUP85-209ENST00000578987 FGD6Q6ZV73 1430 aa5.98□□□□□ -1.45
NUP85-209ENST00000578987 ANKRD30AQ9BXX3 1397 aa5.97□□□□□ -1.45
NUP85-209ENST00000578987 CHGAP10645 457 aaKnown RBP5.97□□□□□ -1.45
NUP85-209ENST00000578987 ITGAEP38570 1179 aa5.97□□□□□ -1.45
NUP85-209ENST00000578987 NUTM2DQ5VT03 806 aaPredicted RBP5.97□□□□□ -1.45
NUP85-209ENST00000578987 PROSER2Q86WR7 435 aaPredicted RBP5.97□□□□□ -1.45
NUP85-209ENST00000578987 SLIT1O75093 1534 aa5.97□□□□□ -1.45
NUP85-209ENST00000578987 PRDM15P57071 1507 aaPredicted RBP5.97□□□□□ -1.45
NUP85-209ENST00000578987 ERBINQ96RT1 1412 aa5.97□□□□□ -1.45
NUP85-209ENST00000578987 CHD2O14647 1828 aaKnown RBP5.97□□□□□ -1.45
NUP85-209ENST00000578987 SYNMO15061 1565 aa5.97□□□□□ -1.45
NUP85-209ENST00000578987 ARHGAP23Q9P227 1491 aa5.96□□□□□ -1.45
NUP85-209ENST00000578987 GCC2Q8IWJ2 1684 aa5.96□□□□□ -1.46
NUP85-209ENST00000578987 ARHGAP31Q2M1Z3 1444 aa5.96□□□□□ -1.46
NUP85-209ENST00000578987 TMEM2Q9UHN6 1383 aa5.95□□□□□ -1.46
NUP85-209ENST00000578987 TET3O43151 1660 aa5.95□□□□□ -1.46
NUP85-209ENST00000578987 KCNA6P17658 529 aa5.95□□□□□ -1.46
NUP85-209ENST00000578987 RGS17Q9UGC6 210 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms