RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
CTDNEP1-212ENST00000576613 CCDC141Q6ZP82 1450 aa18.72■□□□□ 0.59
CTDNEP1-212ENST00000576613 KDM5DQ9BY66 1539 aa18.72■□□□□ 0.59
CTDNEP1-212ENST00000576613 PZPP20742 1482 aa18.7■□□□□ 0.58
CTDNEP1-212ENST00000576613 TNRQ92752 1358 aa18.69■□□□□ 0.58
CTDNEP1-212ENST00000576613 KIF3BO15066 747 aa18.69■□□□□ 0.58
CTDNEP1-212ENST00000576613 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
CTDNEP1-212ENST00000576613 RSPH4AQ5TD94 716 aa18.68■□□□□ 0.58
CTDNEP1-212ENST00000576613 NCOA2Q15596 1464 aa18.67■□□□□ 0.58
CTDNEP1-212ENST00000576613 CPS1P31327 1500 aa18.67■□□□□ 0.58
CTDNEP1-212ENST00000576613 NEURL4Q96JN8 1562 aa18.67■□□□□ 0.58
CTDNEP1-212ENST00000576613 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
CTDNEP1-212ENST00000576613 ARHGEF5Q12774 1597 aa18.64■□□□□ 0.58
CTDNEP1-212ENST00000576613 FBXO31Q5XUX0 539 aaPredicted RBP18.64■□□□□ 0.57
CTDNEP1-212ENST00000576613 NLRP1Q9C000 1473 aa18.64■□□□□ 0.57
CTDNEP1-212ENST00000576613 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
CTDNEP1-212ENST00000576613 UGGT1Q9NYU2 1555 aa18.61■□□□□ 0.57
CTDNEP1-212ENST00000576613 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
CTDNEP1-212ENST00000576613 ANKLE2Q86XL3 938 aa18.61■□□□□ 0.57
CTDNEP1-212ENST00000576613 THEMISQ8N1K5 641 aaPredicted RBP18.61■□□□□ 0.57
CTDNEP1-212ENST00000576613 DEPDC5O75140 1603 aa18.6■□□□□ 0.57
CTDNEP1-212ENST00000576613 MIA2Q96PC5 1412 aa18.6■□□□□ 0.57
CTDNEP1-212ENST00000576613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.6■□□□□ 0.574e-17■□□□□ 10.5
CTDNEP1-212ENST00000576613 TOM1O60784 492 aa18.6■□□□□ 0.57
CTDNEP1-212ENST00000576613 TSPY4P0CV99 314 aa18.6■□□□□ 0.57
CTDNEP1-212ENST00000576613 TSPY10P0CW01 314 aa18.6■□□□□ 0.57
CTDNEP1-212ENST00000576613 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
CTDNEP1-212ENST00000576613 PIP4K2BP78356 416 aa18.58■□□□□ 0.56
CTDNEP1-212ENST00000576613 RNF17Q9BXT8 1623 aaKnown RBP18.58■□□□□ 0.56
CTDNEP1-212ENST00000576613 MED14O60244 1454 aa18.58■□□□□ 0.56
CTDNEP1-212ENST00000576613 VWDEQ8N2E2 1590 aa18.57■□□□□ 0.56
CTDNEP1-212ENST00000576613 IQGAP1P46940 1657 aa18.56■□□□□ 0.56
CTDNEP1-212ENST00000576613 NPHP4O75161 1426 aaPredicted RBP18.56■□□□□ 0.56
CTDNEP1-212ENST00000576613 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
CTDNEP1-212ENST00000576613 MAST1Q9Y2H9 1570 aa18.55■□□□□ 0.56
CTDNEP1-212ENST00000576613 HSPA1LP34931 641 aa18.55■□□□□ 0.56
CTDNEP1-212ENST00000576613 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
CTDNEP1-212ENST00000576613 ABCC3O15438 1527 aa18.54■□□□□ 0.56
CTDNEP1-212ENST00000576613 LRRC9Q6ZRR7 1453 aa18.53■□□□□ 0.56
CTDNEP1-212ENST00000576613 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
CTDNEP1-212ENST00000576613 ERVK-7P63135 1459 aa18.5■□□□□ 0.55
CTDNEP1-212ENST00000576613 SYNMO15061 1565 aa18.5■□□□□ 0.55
CTDNEP1-212ENST00000576613 CEP152O94986 1710 aa18.48■□□□□ 0.55
CTDNEP1-212ENST00000576613 MROH1Q8NDA8 1641 aa18.48■□□□□ 0.55
CTDNEP1-212ENST00000576613 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
CTDNEP1-212ENST00000576613 MAP3K1Q13233 1512 aa18.46■□□□□ 0.55
CTDNEP1-212ENST00000576613 DUOX2Q9NRD8 1548 aa18.46■□□□□ 0.55
CTDNEP1-212ENST00000576613 ALKQ9UM73 1620 aa18.45■□□□□ 0.54
CTDNEP1-212ENST00000576613 STRCP1A6NGW2 1772 aa18.45■□□□□ 0.54
CTDNEP1-212ENST00000576613 MYOM3Q5VTT5 1437 aa18.45■□□□□ 0.54
CTDNEP1-212ENST00000576613 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
CTDNEP1-212ENST00000576613 SCAF11Q99590 1463 aaKnown RBP18.43■□□□□ 0.54
CTDNEP1-212ENST00000576613 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
CTDNEP1-212ENST00000576613 CFAP65Q6ZU64 1925 aaKnown RBP18.42■□□□□ 0.54
CTDNEP1-212ENST00000576613 PRDM15P57071 1507 aaPredicted RBP18.41■□□□□ 0.54
CTDNEP1-212ENST00000576613 CROCC2H7BZ55 1655 aa18.4■□□□□ 0.54
CTDNEP1-212ENST00000576613 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
CTDNEP1-212ENST00000576613 ERBINQ96RT1 1412 aa18.39■□□□□ 0.53
CTDNEP1-212ENST00000576613 SLIT1O75093 1534 aa18.39■□□□□ 0.53
CTDNEP1-212ENST00000576613 KANK4Q5T7N3 995 aaPredicted RBP18.38■□□□□ 0.53
CTDNEP1-212ENST00000576613 KIF15Q9NS87 1388 aa18.38■□□□□ 0.53
CTDNEP1-212ENST00000576613 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
CTDNEP1-212ENST00000576613 EID1Q9Y6B2 187 aa18.36■□□□□ 0.53
CTDNEP1-212ENST00000576613 TXNDC2Q86VQ3 553 aa18.35■□□□□ 0.53
CTDNEP1-212ENST00000576613 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
CTDNEP1-212ENST00000576613 PIK3C2BO00750 1634 aa18.34■□□□□ 0.53
CTDNEP1-212ENST00000576613 PTPN23Q9H3S7 1636 aa18.34■□□□□ 0.53
CTDNEP1-212ENST00000576613 KANK1Q14678 1352 aa18.33■□□□□ 0.53
CTDNEP1-212ENST00000576613 LTKP29376 864 aa18.33■□□□□ 0.52
CTDNEP1-212ENST00000576613 KDM5AP29375 1690 aaKnown RBP18.33■□□□□ 0.52
CTDNEP1-212ENST00000576613 ABCC5O15440 1437 aa18.32■□□□□ 0.52
CTDNEP1-212ENST00000576613 RRP7BPQ9NSQ0 103 aa18.32■□□□□ 0.52
CTDNEP1-212ENST00000576613 XIRP1Q702N8 1843 aaKnown RBP18.32■□□□□ 0.52
CTDNEP1-212ENST00000576613 LOC105371045A0A1W2PR82 267 aa18.3■□□□□ 0.52
CTDNEP1-212ENST00000576613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.529e-7■■□□□ 12.2
CTDNEP1-212ENST00000576613 STAG3Q9UJ98 1225 aa18.3■□□□□ 0.52
CTDNEP1-212ENST00000576613 DAPK1P53355 1430 aa18.3■□□□□ 0.52
CTDNEP1-212ENST00000576613 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
CTDNEP1-212ENST00000576613 EFCAB6Q5THR3 1501 aa18.29■□□□□ 0.52
CTDNEP1-212ENST00000576613 APLP2Q06481 763 aa18.28■□□□□ 0.52
CTDNEP1-212ENST00000576613 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
CTDNEP1-212ENST00000576613 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
CTDNEP1-212ENST00000576613 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
CTDNEP1-212ENST00000576613 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
CTDNEP1-212ENST00000576613 ADGRB3O60242 1522 aa18.23■□□□□ 0.51
CTDNEP1-212ENST00000576613 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
CTDNEP1-212ENST00000576613 KCNA6P17658 529 aa18.21■□□□□ 0.51
CTDNEP1-212ENST00000576613 IDI1Q13907 227 aa18.21■□□□□ 0.51
CTDNEP1-212ENST00000576613 TET3O43151 1660 aa18.21■□□□□ 0.51
CTDNEP1-212ENST00000576613 ROBO1Q9Y6N7 1651 aa18.2■□□□□ 0.5
CTDNEP1-212ENST00000576613 NKTRP30414 1462 aaKnown RBP18.2■□□□□ 0.5
CTDNEP1-212ENST00000576613 NOS1P29475 1434 aa18.19■□□□□ 0.5
CTDNEP1-212ENST00000576613 NWD1Q149M9 1564 aa18.19■□□□□ 0.5
CTDNEP1-212ENST00000576613 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
CTDNEP1-212ENST00000576613 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
CTDNEP1-212ENST00000576613 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
CTDNEP1-212ENST00000576613 PROSER2Q86WR7 435 aaPredicted RBP18.17■□□□□ 0.5
CTDNEP1-212ENST00000576613 ADGRL2O95490 1459 aa18.16■□□□□ 0.5
CTDNEP1-212ENST00000576613 RPRD2Q5VT52 1461 aaKnown RBP18.16■□□□□ 0.5
CTDNEP1-212ENST00000576613 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms