RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 KIF3BO15066 747 aa16.13■□□□□ 0.17
CALCOCO2-227ENST00000575560 TNRQ92752 1358 aa16.12■□□□□ 0.17
CALCOCO2-227ENST00000575560 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
CALCOCO2-227ENST00000575560 HSPA1LP34931 641 aa16.11■□□□□ 0.17
CALCOCO2-227ENST00000575560 TOM1O60784 492 aa16.1■□□□□ 0.17
CALCOCO2-227ENST00000575560 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
CALCOCO2-227ENST00000575560 PZPP20742 1482 aa16.1■□□□□ 0.17
CALCOCO2-227ENST00000575560 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
CALCOCO2-227ENST00000575560 ANKLE2Q86XL3 938 aa16.09■□□□□ 0.17
CALCOCO2-227ENST00000575560 THEMISQ8N1K5 641 aaPredicted RBP16.09■□□□□ 0.17
CALCOCO2-227ENST00000575560 WASHC2CQ9Y4E1 1318 aa16.09■□□□□ 0.17
CALCOCO2-227ENST00000575560 CPS1P31327 1500 aa16.09■□□□□ 0.17
CALCOCO2-227ENST00000575560 EHBP1L1Q8N3D4 1523 aa16.09■□□□□ 0.17
CALCOCO2-227ENST00000575560 NEURL4Q96JN8 1562 aa16.09■□□□□ 0.17
CALCOCO2-227ENST00000575560 PIP4K2BP78356 416 aa16.08■□□□□ 0.16
CALCOCO2-227ENST00000575560 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
CALCOCO2-227ENST00000575560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.07■□□□□ 0.16
CALCOCO2-227ENST00000575560 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
CALCOCO2-227ENST00000575560 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
CALCOCO2-227ENST00000575560 CCDC141Q6ZP82 1450 aa16.06■□□□□ 0.16
CALCOCO2-227ENST00000575560 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
CALCOCO2-227ENST00000575560 MED14O60244 1454 aa16.04■□□□□ 0.16
CALCOCO2-227ENST00000575560 POLR1AO95602 1720 aaPredicted RBP16.04■□□□□ 0.16
CALCOCO2-227ENST00000575560 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
CALCOCO2-227ENST00000575560 VWDEQ8N2E2 1590 aa16.03■□□□□ 0.16
CALCOCO2-227ENST00000575560 CAMSAP2Q08AD1 1489 aa16.03■□□□□ 0.16
CALCOCO2-227ENST00000575560 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
CALCOCO2-227ENST00000575560 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.15
CALCOCO2-227ENST00000575560 MED1Q15648 1581 aaPredicted RBP16.01■□□□□ 0.15
CALCOCO2-227ENST00000575560 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
CALCOCO2-227ENST00000575560 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
CALCOCO2-227ENST00000575560 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
CALCOCO2-227ENST00000575560 DEPDC5O75140 1603 aa16.01■□□□□ 0.15
CALCOCO2-227ENST00000575560 ALKQ9UM73 1620 aa16■□□□□ 0.15
CALCOCO2-227ENST00000575560 ARHGEF5Q12774 1597 aa15.98■□□□□ 0.15
CALCOCO2-227ENST00000575560 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
CALCOCO2-227ENST00000575560 ABCC3O15438 1527 aa15.94■□□□□ 0.14
CALCOCO2-227ENST00000575560 RNF17Q9BXT8 1623 aaKnown RBP15.93■□□□□ 0.14
CALCOCO2-227ENST00000575560 IQGAP1P46940 1657 aa15.92■□□□□ 0.14
CALCOCO2-227ENST00000575560 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
CALCOCO2-227ENST00000575560 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
CALCOCO2-227ENST00000575560 MAST1Q9Y2H9 1570 aa15.91■□□□□ 0.14
CALCOCO2-227ENST00000575560 LTKP29376 864 aa15.89■□□□□ 0.13
CALCOCO2-227ENST00000575560 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
CALCOCO2-227ENST00000575560 ZC3H13Q5T200 1668 aaKnown RBP15.89■□□□□ 0.13
CALCOCO2-227ENST00000575560 MROH1Q8NDA8 1641 aa15.88■□□□□ 0.13
CALCOCO2-227ENST00000575560 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
CALCOCO2-227ENST00000575560 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
CALCOCO2-227ENST00000575560 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
CALCOCO2-227ENST00000575560 ARHGAP23Q9P227 1491 aa15.86■□□□□ 0.13
CALCOCO2-227ENST00000575560 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
CALCOCO2-227ENST00000575560 SYNMO15061 1565 aa15.86■□□□□ 0.13
CALCOCO2-227ENST00000575560 ARHGAP31Q2M1Z3 1444 aa15.85■□□□□ 0.13
CALCOCO2-227ENST00000575560 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
CALCOCO2-227ENST00000575560 RGS17Q9UGC6 210 aaPredicted RBP15.85■□□□□ 0.13
CALCOCO2-227ENST00000575560 SLIT1O75093 1534 aa15.84■□□□□ 0.13
CALCOCO2-227ENST00000575560 MYOM3Q5VTT5 1437 aa15.83■□□□□ 0.12
CALCOCO2-227ENST00000575560 VPS8Q8N3P4 1428 aa15.83■□□□□ 0.12
CALCOCO2-227ENST00000575560 DUOX2Q9NRD8 1548 aa15.83■□□□□ 0.12
CALCOCO2-227ENST00000575560 EID1Q9Y6B2 187 aa15.82■□□□□ 0.12
CALCOCO2-227ENST00000575560 CEP152O94986 1710 aa15.81■□□□□ 0.12
CALCOCO2-227ENST00000575560 MAP3K1Q13233 1512 aa15.81■□□□□ 0.12
CALCOCO2-227ENST00000575560 CFAP65Q6ZU64 1925 aaKnown RBP15.81■□□□□ 0.12
CALCOCO2-227ENST00000575560 FAM135BQ49AJ0 1406 aa15.79■□□□□ 0.12
CALCOCO2-227ENST00000575560 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
CALCOCO2-227ENST00000575560 TMEM2Q9UHN6 1383 aa15.79■□□□□ 0.12
CALCOCO2-227ENST00000575560 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
CALCOCO2-227ENST00000575560 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
CALCOCO2-227ENST00000575560 ABCC5O15440 1437 aa15.77■□□□□ 0.12
CALCOCO2-227ENST00000575560 ERBINQ96RT1 1412 aa15.77■□□□□ 0.12
CALCOCO2-227ENST00000575560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.124e-7■■□□□ 13.4
CALCOCO2-227ENST00000575560 XIRP1Q702N8 1843 aaKnown RBP15.77■□□□□ 0.11
CALCOCO2-227ENST00000575560 LOC105371045A0A1W2PR82 267 aa15.76■□□□□ 0.11
CALCOCO2-227ENST00000575560 KCNA6P17658 529 aa15.76■□□□□ 0.11
CALCOCO2-227ENST00000575560 IDI1Q13907 227 aa15.76■□□□□ 0.11
CALCOCO2-227ENST00000575560 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
CALCOCO2-227ENST00000575560 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
CALCOCO2-227ENST00000575560 FOXD1Q16676 465 aa15.74■□□□□ 0.11
CALCOCO2-227ENST00000575560 PIK3C2BO00750 1634 aa15.74■□□□□ 0.11
CALCOCO2-227ENST00000575560 KANK1Q14678 1352 aa15.73■□□□□ 0.11
CALCOCO2-227ENST00000575560 TET3O43151 1660 aa15.73■□□□□ 0.11
CALCOCO2-227ENST00000575560 POTEAQ6S8J7 498 aa15.72■□□□□ 0.11
CALCOCO2-227ENST00000575560 PROSER2Q86WR7 435 aaPredicted RBP15.72■□□□□ 0.11
CALCOCO2-227ENST00000575560 SLC26A8Q96RN1 970 aa15.72■□□□□ 0.11
CALCOCO2-227ENST00000575560 EFCAB6Q5THR3 1501 aa15.71■□□□□ 0.11
CALCOCO2-227ENST00000575560 LMTK2Q8IWU2 1503 aa15.71■□□□□ 0.11
CALCOCO2-227ENST00000575560 KDM5AP29375 1690 aaKnown RBP15.7■□□□□ 0.1
CALCOCO2-227ENST00000575560 DAPK1P53355 1430 aa15.7■□□□□ 0.1
CALCOCO2-227ENST00000575560 RBM33Q96EV2 1170 aaKnown RBP15.7■□□□□ 0.1
CALCOCO2-227ENST00000575560 NOS1P29475 1434 aa15.69■□□□□ 0.1
CALCOCO2-227ENST00000575560 CROCC2H7BZ55 1655 aa15.68■□□□□ 0.1
CALCOCO2-227ENST00000575560 SLC52A1Q9NWF4 448 aa15.68■□□□□ 0.1
CALCOCO2-227ENST00000575560 PTPN23Q9H3S7 1636 aa15.68■□□□□ 0.1
CALCOCO2-227ENST00000575560 ANKRD30AQ9BXX3 1397 aa15.67■□□□□ 0.1
CALCOCO2-227ENST00000575560 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
CALCOCO2-227ENST00000575560 SLAIN2Q9P270 581 aa15.66■□□□□ 0.1
CALCOCO2-227ENST00000575560 ROBO1Q9Y6N7 1651 aa15.66■□□□□ 0.1
CALCOCO2-227ENST00000575560 FGD6Q6ZV73 1430 aa15.65■□□□□ 0.1
CALCOCO2-227ENST00000575560 NKTRP30414 1462 aaKnown RBP15.65■□□□□ 0.1
CALCOCO2-227ENST00000575560 NWD1Q149M9 1564 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms