RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 TCOF1Q13428 1488 aaKnown RBP15.22■□□□□ 0.03
AC055876.4-201ENST00000562515 PKD2Q13563 968 aa15.22■□□□□ 0.03
AC055876.4-201ENST00000562515 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
AC055876.4-201ENST00000562515 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
AC055876.4-201ENST00000562515 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
AC055876.4-201ENST00000562515 ZC3H13Q5T200 1668 aaKnown RBP15.2■□□□□ 0.02
AC055876.4-201ENST00000562515 KIF3BO15066 747 aa15.2■□□□□ 0.02
AC055876.4-201ENST00000562515 TNRQ92752 1358 aa15.19■□□□□ 0.02
AC055876.4-201ENST00000562515 PZPP20742 1482 aa15.19■□□□□ 0.02
AC055876.4-201ENST00000562515 UBAP1LF5GYI3 381 aa15.17■□□□□ 0.02
AC055876.4-201ENST00000562515 WASHC2CQ9Y4E1 1318 aa15.17■□□□□ 0.02
AC055876.4-201ENST00000562515 RNF17Q9BXT8 1623 aaKnown RBP15.16■□□□□ 0.02
AC055876.4-201ENST00000562515 EIF2AK4Q9P2K8 1649 aaKnown RBP15.16■□□□□ 0.02
AC055876.4-201ENST00000562515 NEURL4Q96JN8 1562 aa15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 CEP152O94986 1710 aa15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 TSPY4P0CV99 314 aa15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 TSPY10P0CW01 314 aa15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 RSPH4AQ5TD94 716 aa15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
AC055876.4-201ENST00000562515 LRRC9Q6ZRR7 1453 aa15.14■□□□□ 0.01
AC055876.4-201ENST00000562515 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
AC055876.4-201ENST00000562515 CPS1P31327 1500 aa15.13■□□□□ 0.01
AC055876.4-201ENST00000562515 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
AC055876.4-201ENST00000562515 FBXO31Q5XUX0 539 aaPredicted RBP15.12■□□□□ 0.01
AC055876.4-201ENST00000562515 ILDR2Q71H61 639 aa15.12■□□□□ 0.01
AC055876.4-201ENST00000562515 CROCC2H7BZ55 1655 aa15.12■□□□□ 0.01
AC055876.4-201ENST00000562515 DEPDC5O75140 1603 aa15.1■□□□□ 0.01
AC055876.4-201ENST00000562515 CFAP65Q6ZU64 1925 aaKnown RBP15.1■□□□□ 0.01
AC055876.4-201ENST00000562515 ABCC3O15438 1527 aa15.1■□□□□ 0.01
AC055876.4-201ENST00000562515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.1■□□□□ 0.01
AC055876.4-201ENST00000562515 SOCS7O14512 581 aa15.08■□□□□ 0
AC055876.4-201ENST00000562515 MYOM3Q5VTT5 1437 aa15.08■□□□□ 0
AC055876.4-201ENST00000562515 MIA2Q96PC5 1412 aa15.08■□□□□ 0
AC055876.4-201ENST00000562515 SHANK2Q9UPX8 1470 aa15.08■□□□□ 0
AC055876.4-201ENST00000562515 ANKLE2Q86XL3 938 aa15.07■□□□□ 0
AC055876.4-201ENST00000562515 THEMISQ8N1K5 641 aaPredicted RBP15.07■□□□□ 0
AC055876.4-201ENST00000562515 NPHP4O75161 1426 aaPredicted RBP15.07■□□□□ 0
AC055876.4-201ENST00000562515 SYNMO15061 1565 aa15.07■□□□□ 0
AC055876.4-201ENST00000562515 PIP4K2BP78356 416 aa15.06■□□□□ 0
AC055876.4-201ENST00000562515 MAP3K1Q13233 1512 aa15.06■□□□□ 0
AC055876.4-201ENST00000562515 DUOX2Q9NRD8 1548 aa15.06■□□□□ 0
AC055876.4-201ENST00000562515 VWDEQ8N2E2 1590 aa15.06■□□□□ 0
AC055876.4-201ENST00000562515 MROH1Q8NDA8 1641 aa15.06■□□□□ 0
AC055876.4-201ENST00000562515 ERVK-7P63135 1459 aa15.05■□□□□ -0
AC055876.4-201ENST00000562515 UBR1Q8IWV7 1749 aa15.05■□□□□ -0
AC055876.4-201ENST00000562515 PTPN23Q9H3S7 1636 aa15.04■□□□□ -0
AC055876.4-201ENST00000562515 TOM1O60784 492 aa15.04■□□□□ -0
AC055876.4-201ENST00000562515 FOXD1Q16676 465 aa15.04■□□□□ -0
AC055876.4-201ENST00000562515 MED1Q15648 1581 aaPredicted RBP15.02■□□□□ -0
AC055876.4-201ENST00000562515 MED14O60244 1454 aa15.02■□□□□ -0
AC055876.4-201ENST00000562515 APLP2Q06481 763 aa15.02■□□□□ -0
AC055876.4-201ENST00000562515 PRDM15P57071 1507 aaPredicted RBP15.02□□□□□ -0.01
AC055876.4-201ENST00000562515 STRCP1A6NGW2 1772 aa15.01□□□□□ -0.01
AC055876.4-201ENST00000562515 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
AC055876.4-201ENST00000562515 KANK4Q5T7N3 995 aaPredicted RBP14.99□□□□□ -0.01
AC055876.4-201ENST00000562515 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
AC055876.4-201ENST00000562515 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
AC055876.4-201ENST00000562515 SCAF11Q99590 1463 aaKnown RBP14.98□□□□□ -0.01
AC055876.4-201ENST00000562515 HSPA1LP34931 641 aa14.98□□□□□ -0.01
AC055876.4-201ENST00000562515 PIK3C2BO00750 1634 aa14.97□□□□□ -0.01
AC055876.4-201ENST00000562515 KANK1Q14678 1352 aa14.96□□□□□ -0.02
AC055876.4-201ENST00000562515 DAPK1P53355 1430 aa14.95□□□□□ -0.02
AC055876.4-201ENST00000562515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
AC055876.4-201ENST00000562515 LRRC7Q96NW7 1537 aa14.93□□□□□ -0.02
AC055876.4-201ENST00000562515 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
AC055876.4-201ENST00000562515 STAG3Q9UJ98 1225 aa14.93□□□□□ -0.02
AC055876.4-201ENST00000562515 ABCC5O15440 1437 aa14.92□□□□□ -0.02
AC055876.4-201ENST00000562515 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
AC055876.4-201ENST00000562515 SLIT1O75093 1534 aa14.92□□□□□ -0.02
AC055876.4-201ENST00000562515 KDM5AP29375 1690 aaKnown RBP14.92□□□□□ -0.02
AC055876.4-201ENST00000562515 ALKQ9UM73 1620 aa14.92□□□□□ -0.02
AC055876.4-201ENST00000562515 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
AC055876.4-201ENST00000562515 EID1Q9Y6B2 187 aa14.91□□□□□ -0.02
AC055876.4-201ENST00000562515 EFCAB6Q5THR3 1501 aa14.91□□□□□ -0.02
AC055876.4-201ENST00000562515 ARHGAP23Q9P227 1491 aa14.9□□□□□ -0.02
AC055876.4-201ENST00000562515 XIRP1Q702N8 1843 aaKnown RBP14.9□□□□□ -0.02
AC055876.4-201ENST00000562515 ANKRD30AQ9BXX3 1397 aa14.9□□□□□ -0.02
AC055876.4-201ENST00000562515 TXNDC2Q86VQ3 553 aa14.89□□□□□ -0.03
AC055876.4-201ENST00000562515 CHIC2Q9UKJ5 165 aa14.88□□□□□ -0.03
AC055876.4-201ENST00000562515 ADGRB3O60242 1522 aa14.87□□□□□ -0.03
AC055876.4-201ENST00000562515 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
AC055876.4-201ENST00000562515 GCC2Q8IWJ2 1684 aa14.85□□□□□ -0.03
AC055876.4-201ENST00000562515 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
AC055876.4-201ENST00000562515 LTKP29376 864 aa14.84□□□□□ -0.03
AC055876.4-201ENST00000562515 MYO5BQ9ULV0 1848 aa14.84□□□□□ -0.03
AC055876.4-201ENST00000562515 TET3O43151 1660 aa14.82□□□□□ -0.04
AC055876.4-201ENST00000562515 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
AC055876.4-201ENST00000562515 BCANQ96GW7 911 aa14.82□□□□□ -0.04
AC055876.4-201ENST00000562515 ADGRL2O95490 1459 aa14.82□□□□□ -0.04
AC055876.4-201ENST00000562515 ROBO1Q9Y6N7 1651 aa14.81□□□□□ -0.04
AC055876.4-201ENST00000562515 NWD1Q149M9 1564 aa14.79□□□□□ -0.04
AC055876.4-201ENST00000562515 NKTRP30414 1462 aaKnown RBP14.78□□□□□ -0.04
AC055876.4-201ENST00000562515 RPRD2Q5VT52 1461 aaKnown RBP14.78□□□□□ -0.04
AC055876.4-201ENST00000562515 NOS1P29475 1434 aa14.77□□□□□ -0.04
AC055876.4-201ENST00000562515 ANKRD50Q9ULJ7 1429 aa14.77□□□□□ -0.04
AC055876.4-201ENST00000562515 TMEM94Q12767 1356 aa14.77□□□□□ -0.04
AC055876.4-201ENST00000562515 IDI1Q13907 227 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms