RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 NISCHQ9Y2I1 1504 aa23.96■■□□□ 1.43
AC055876.4-201ENST00000562515 ABCC9O60706 1549 aa21.68■■□□□ 1.06
AC055876.4-201ENST00000562515 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
AC055876.4-201ENST00000562515 RB1CC1Q8TDY2 1594 aa20.64■□□□□ 0.9
AC055876.4-201ENST00000562515 NACADO15069 1562 aa20.42■□□□□ 0.86
AC055876.4-201ENST00000562515 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
AC055876.4-201ENST00000562515 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
AC055876.4-201ENST00000562515 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
AC055876.4-201ENST00000562515 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
AC055876.4-201ENST00000562515 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
AC055876.4-201ENST00000562515 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
AC055876.4-201ENST00000562515 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
AC055876.4-201ENST00000562515 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
AC055876.4-201ENST00000562515 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
AC055876.4-201ENST00000562515 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
AC055876.4-201ENST00000562515 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
AC055876.4-201ENST00000562515 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
AC055876.4-201ENST00000562515 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
AC055876.4-201ENST00000562515 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
AC055876.4-201ENST00000562515 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
AC055876.4-201ENST00000562515 ERCC6Q03468 1493 aa18.78■□□□□ 0.6
AC055876.4-201ENST00000562515 NCAPD3P42695 1498 aa18.77■□□□□ 0.59
AC055876.4-201ENST00000562515 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
AC055876.4-201ENST00000562515 ATAD2BQ9ULI0 1458 aa18.74■□□□□ 0.59
AC055876.4-201ENST00000562515 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
AC055876.4-201ENST00000562515 CUX2O14529 1486 aa18.71■□□□□ 0.59
AC055876.4-201ENST00000562515 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
AC055876.4-201ENST00000562515 DNAJC5Q9H3Z4 198 aa18.66■□□□□ 0.58
AC055876.4-201ENST00000562515 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
AC055876.4-201ENST00000562515 NESP48681 1621 aa18.56■□□□□ 0.56
AC055876.4-201ENST00000562515 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
AC055876.4-201ENST00000562515 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
AC055876.4-201ENST00000562515 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
AC055876.4-201ENST00000562515 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
AC055876.4-201ENST00000562515 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
AC055876.4-201ENST00000562515 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.53
AC055876.4-201ENST00000562515 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.52
AC055876.4-201ENST00000562515 WIZO95785 1651 aa18.31■□□□□ 0.52
AC055876.4-201ENST00000562515 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
AC055876.4-201ENST00000562515 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
AC055876.4-201ENST00000562515 WDR62O43379 1518 aa18.16■□□□□ 0.5
AC055876.4-201ENST00000562515 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.5
AC055876.4-201ENST00000562515 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
AC055876.4-201ENST00000562515 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
AC055876.4-201ENST00000562515 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
AC055876.4-201ENST00000562515 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
AC055876.4-201ENST00000562515 CFTRP13569 1480 aa18■□□□□ 0.47
AC055876.4-201ENST00000562515 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
AC055876.4-201ENST00000562515 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
AC055876.4-201ENST00000562515 CCDC88BA6NC98 1476 aa17.78■□□□□ 0.44
AC055876.4-201ENST00000562515 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
AC055876.4-201ENST00000562515 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
AC055876.4-201ENST00000562515 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
AC055876.4-201ENST00000562515 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
AC055876.4-201ENST00000562515 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
AC055876.4-201ENST00000562515 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
AC055876.4-201ENST00000562515 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
AC055876.4-201ENST00000562515 RIMBP3CA6NJZ7 1639 aa17.67■□□□□ 0.42
AC055876.4-201ENST00000562515 RIMBP3BA6NNM3 1639 aa17.67■□□□□ 0.42
AC055876.4-201ENST00000562515 RIMBP3Q9UFD9 1639 aa17.67■□□□□ 0.42
AC055876.4-201ENST00000562515 CHD1O14646 1710 aa17.63■□□□□ 0.41
AC055876.4-201ENST00000562515 TARBP1Q13395 1621 aaKnown RBP17.57■□□□□ 0.4
AC055876.4-201ENST00000562515 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
AC055876.4-201ENST00000562515 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.4
AC055876.4-201ENST00000562515 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
AC055876.4-201ENST00000562515 FBLN2P98095 1184 aa17.47■□□□□ 0.39
AC055876.4-201ENST00000562515 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
AC055876.4-201ENST00000562515 WDR97A6NE52 1622 aa17.44■□□□□ 0.38
AC055876.4-201ENST00000562515 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
AC055876.4-201ENST00000562515 SOGA1O94964 1423 aa17.42■□□□□ 0.38
AC055876.4-201ENST00000562515 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
AC055876.4-201ENST00000562515 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
AC055876.4-201ENST00000562515 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
AC055876.4-201ENST00000562515 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
AC055876.4-201ENST00000562515 CUX1P39880 1505 aa17.37■□□□□ 0.37
AC055876.4-201ENST00000562515 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
AC055876.4-201ENST00000562515 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
AC055876.4-201ENST00000562515 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
AC055876.4-201ENST00000562515 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
AC055876.4-201ENST00000562515 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
AC055876.4-201ENST00000562515 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
AC055876.4-201ENST00000562515 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
AC055876.4-201ENST00000562515 SYNJ2O15056 1496 aa17.27■□□□□ 0.36
AC055876.4-201ENST00000562515 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
AC055876.4-201ENST00000562515 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
AC055876.4-201ENST00000562515 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
AC055876.4-201ENST00000562515 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
AC055876.4-201ENST00000562515 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
AC055876.4-201ENST00000562515 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
AC055876.4-201ENST00000562515 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
AC055876.4-201ENST00000562515 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.33
AC055876.4-201ENST00000562515 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
AC055876.4-201ENST00000562515 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
AC055876.4-201ENST00000562515 ERCC6L2Q5T890 1561 aa17.02■□□□□ 0.31
AC055876.4-201ENST00000562515 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
AC055876.4-201ENST00000562515 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
AC055876.4-201ENST00000562515 NUP160Q12769 1436 aa16.99■□□□□ 0.31
AC055876.4-201ENST00000562515 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
AC055876.4-201ENST00000562515 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
AC055876.4-201ENST00000562515 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms