RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.17
SNX6-210ENST00000557341 PTPRTO14522 1441 aa22.38■■□□□ 1.17
SNX6-210ENST00000557341 KANK4Q5T7N3 995 aaPredicted RBP22.37■■□□□ 1.17
SNX6-210ENST00000557341 PTPN23Q9H3S7 1636 aa22.36■■□□□ 1.17
SNX6-210ENST00000557341 POLR1AO95602 1720 aaPredicted RBP22.34■■□□□ 1.17
SNX6-210ENST00000557341 TSPY4P0CV99 314 aa22.34■■□□□ 1.17
SNX6-210ENST00000557341 TSPY10P0CW01 314 aa22.34■■□□□ 1.17
SNX6-210ENST00000557341 KIF3BO15066 747 aa22.33■■□□□ 1.17
SNX6-210ENST00000557341 CERKQ8TCT0 537 aa22.32■■□□□ 1.16
SNX6-210ENST00000557341 PZPP20742 1482 aa22.32■■□□□ 1.16
SNX6-210ENST00000557341 PLA2R1Q13018 1463 aa22.32■■□□□ 1.16
SNX6-210ENST00000557341 DNMT1P26358 1616 aaKnown RBP22.31■■□□□ 1.16
SNX6-210ENST00000557341 CEP152O94986 1710 aa22.31■■□□□ 1.16
SNX6-210ENST00000557341 MROH1Q8NDA8 1641 aa22.29■■□□□ 1.16
SNX6-210ENST00000557341 APLP2Q06481 763 aa22.29■■□□□ 1.16
SNX6-210ENST00000557341 A2ML1A8K2U0 1454 aa22.28■■□□□ 1.16
SNX6-210ENST00000557341 SHANK2Q9UPX8 1470 aa22.28■■□□□ 1.16
SNX6-210ENST00000557341 DUOX2Q9NRD8 1548 aa22.27■■□□□ 1.16
SNX6-210ENST00000557341 TCOF1Q13428 1488 aaKnown RBP22.27■■□□□ 1.16
SNX6-210ENST00000557341 LTBP4Q8N2S1 1624 aa22.26■■□□□ 1.15
SNX6-210ENST00000557341 ABCC3O15438 1527 aa22.26■■□□□ 1.15
SNX6-210ENST00000557341 WASHC2CQ9Y4E1 1318 aa22.24■■□□□ 1.15
SNX6-210ENST00000557341 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
SNX6-210ENST00000557341 TNRQ92752 1358 aa22.23■■□□□ 1.15
SNX6-210ENST00000557341 FGD6Q6ZV73 1430 aa22.23■■□□□ 1.15
SNX6-210ENST00000557341 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
SNX6-210ENST00000557341 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
SNX6-210ENST00000557341 SPATA31D1Q6ZQQ2 1576 aa22.21■■□□□ 1.15
SNX6-210ENST00000557341 DAPK1P53355 1430 aa22.2■■□□□ 1.14
SNX6-210ENST00000557341 IQSEC2Q5JU85 1478 aa22.2■■□□□ 1.14
SNX6-210ENST00000557341 PKD2Q13563 968 aa22.19■■□□□ 1.14
SNX6-210ENST00000557341 ABCC5O15440 1437 aa22.19■■□□□ 1.14
SNX6-210ENST00000557341 NLRP1Q9C000 1473 aa22.19■■□□□ 1.14
SNX6-210ENST00000557341 NEURL4Q96JN8 1562 aa22.18■■□□□ 1.14
SNX6-210ENST00000557341 ERBINQ96RT1 1412 aa22.18■■□□□ 1.14
SNX6-210ENST00000557341 NCKAP5LQ9HCH0 1330 aa22.18■■□□□ 1.14
SNX6-210ENST00000557341 KIF15Q9NS87 1388 aa22.17■■□□□ 1.14
SNX6-210ENST00000557341 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
SNX6-210ENST00000557341 FBXO31Q5XUX0 539 aaPredicted RBP22.16■■□□□ 1.14
SNX6-210ENST00000557341 ERVK-7P63135 1459 aa22.14■■□□□ 1.13
SNX6-210ENST00000557341 UBR1Q8IWV7 1749 aa22.13■■□□□ 1.13
SNX6-210ENST00000557341 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
SNX6-210ENST00000557341 ZNF335Q9H4Z2 1342 aaPredicted RBP22.08■■□□□ 1.13
SNX6-210ENST00000557341 ANKRD30AQ9BXX3 1397 aa22.07■■□□□ 1.12
SNX6-210ENST00000557341 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
SNX6-210ENST00000557341 ADGRL2O95490 1459 aa22.06■■□□□ 1.12
SNX6-210ENST00000557341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.05■■□□□ 1.12
SNX6-210ENST00000557341 ARHGAP31Q2M1Z3 1444 aa22.05■■□□□ 1.12
SNX6-210ENST00000557341 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
SNX6-210ENST00000557341 MED14O60244 1454 aa22.03■■□□□ 1.12
SNX6-210ENST00000557341 THEMISQ8N1K5 641 aaPredicted RBP22.03■■□□□ 1.12
SNX6-210ENST00000557341 KDM5AP29375 1690 aaKnown RBP22.03■■□□□ 1.12
SNX6-210ENST00000557341 CPS1P31327 1500 aa22.02■■□□□ 1.12
SNX6-210ENST00000557341 LMTK2Q8IWU2 1503 aa22.02■■□□□ 1.12
SNX6-210ENST00000557341 PIK3C2BO00750 1634 aa22.02■■□□□ 1.11
SNX6-210ENST00000557341 KANK1Q14678 1352 aa22.01■■□□□ 1.11
SNX6-210ENST00000557341 ANKLE2Q86XL3 938 aa22■■□□□ 1.11
SNX6-210ENST00000557341 EFCAB6Q5THR3 1501 aa22■■□□□ 1.11
SNX6-210ENST00000557341 NPHP4O75161 1426 aaPredicted RBP21.99■■□□□ 1.11
SNX6-210ENST00000557341 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
SNX6-210ENST00000557341 GCC2Q8IWJ2 1684 aa21.97■■□□□ 1.11
SNX6-210ENST00000557341 STRCP1A6NGW2 1772 aa21.97■■□□□ 1.11
SNX6-210ENST00000557341 SYNMO15061 1565 aa21.96■■□□□ 1.11
SNX6-210ENST00000557341 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
SNX6-210ENST00000557341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.115e-7■■□□□ 12.3
SNX6-210ENST00000557341 SLIT1O75093 1534 aa21.96■■□□□ 1.11
SNX6-210ENST00000557341 TET3O43151 1660 aa21.95■■□□□ 1.1
SNX6-210ENST00000557341 UNC13BO14795 1591 aa21.94■■□□□ 1.1
SNX6-210ENST00000557341 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
SNX6-210ENST00000557341 ARHGAP23Q9P227 1491 aa21.92■■□□□ 1.1
SNX6-210ENST00000557341 ANKRD50Q9ULJ7 1429 aa21.91■■□□□ 1.1
SNX6-210ENST00000557341 MYO5BQ9ULV0 1848 aa21.9■■□□□ 1.1
SNX6-210ENST00000557341 UBAP1LF5GYI3 381 aa21.89■■□□□ 1.09
SNX6-210ENST00000557341 ADGRB3O60242 1522 aa21.88■■□□□ 1.09
SNX6-210ENST00000557341 RPRD2Q5VT52 1461 aaKnown RBP21.88■■□□□ 1.09
SNX6-210ENST00000557341 NOS1P29475 1434 aa21.86■■□□□ 1.09
SNX6-210ENST00000557341 IQGAP3Q86VI3 1631 aa21.85■■□□□ 1.09
SNX6-210ENST00000557341 E9PCH4 1651 aa21.85■■□□□ 1.09
SNX6-210ENST00000557341 XIRP1Q702N8 1843 aaKnown RBP21.84■■□□□ 1.09
SNX6-210ENST00000557341 ROCK1Q13464 1354 aa21.83■■□□□ 1.08
SNX6-210ENST00000557341 TMEM2Q9UHN6 1383 aa21.82■■□□□ 1.08
SNX6-210ENST00000557341 STAG3Q9UJ98 1225 aa21.8■■□□□ 1.08
SNX6-210ENST00000557341 LRRC7Q96NW7 1537 aa21.8■■□□□ 1.08
SNX6-210ENST00000557341 EID1Q9Y6B2 187 aa21.79■■□□□ 1.08
SNX6-210ENST00000557341 ALKQ9UM73 1620 aa21.79■■□□□ 1.08
SNX6-210ENST00000557341 DISP3Q9P2K9 1392 aa21.78■■□□□ 1.08
SNX6-210ENST00000557341 LTKP29376 864 aa21.78■■□□□ 1.08
SNX6-210ENST00000557341 TXNDC2Q86VQ3 553 aa21.78■■□□□ 1.08
SNX6-210ENST00000557341 TMEM131LA2VDJ0 1609 aa21.77■■□□□ 1.08
SNX6-210ENST00000557341 TOM1O60784 492 aa21.76■■□□□ 1.07
SNX6-210ENST00000557341 IDI1Q13907 227 aa21.76■■□□□ 1.07
SNX6-210ENST00000557341 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
SNX6-210ENST00000557341 SPHKAPQ2M3C7 1700 aa21.73■■□□□ 1.07
SNX6-210ENST00000557341 SLC52A1Q9NWF4 448 aa21.73■■□□□ 1.07
SNX6-210ENST00000557341 NWD1Q149M9 1564 aa21.71■■□□□ 1.07
SNX6-210ENST00000557341 PIP4K2BP78356 416 aa21.71■■□□□ 1.07
SNX6-210ENST00000557341 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
SNX6-210ENST00000557341 CHD2O14647 1828 aaKnown RBP21.69■■□□□ 1.06
SNX6-210ENST00000557341 ITGAEP38570 1179 aa21.68■■□□□ 1.06
SNX6-210ENST00000557341 ZFYVE9O95405 1425 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms