RNA–Protein interactions for RNA: ENST00000555592.1

NPC2-206, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-206ENST00000555592 KDM5DQ9BY66 1539 aa29.06■■■□□ 2.24
NPC2-206ENST00000555592 CCDC141Q6ZP82 1450 aa29.06■■■□□ 2.24
NPC2-206ENST00000555592 KIF3BO15066 747 aa29.06■■■□□ 2.24
NPC2-206ENST00000555592 TNRQ92752 1358 aa29.05■■■□□ 2.24
NPC2-206ENST00000555592 NEURL4Q96JN8 1562 aa29.05■■■□□ 2.24
NPC2-206ENST00000555592 CAMSAP2Q08AD1 1489 aa29.04■■■□□ 2.24
NPC2-206ENST00000555592 FBXO31Q5XUX0 539 aaPredicted RBP29.04■■■□□ 2.24
NPC2-206ENST00000555592 PZPP20742 1482 aa29.03■■■□□ 2.24
NPC2-206ENST00000555592 FAM135AQ9P2D6 1515 aa29.02■■■□□ 2.24
NPC2-206ENST00000555592 NCOA2Q15596 1464 aa29.01■■■□□ 2.23
NPC2-206ENST00000555592 WASHC2CQ9Y4E1 1318 aa28.97■■■□□ 2.23
NPC2-206ENST00000555592 CPS1P31327 1500 aa28.97■■■□□ 2.23
NPC2-206ENST00000555592 SCAF1Q9H7N4 1312 aaKnown RBP28.96■■■□□ 2.23
NPC2-206ENST00000555592 SHANK2Q9UPX8 1470 aa28.95■■■□□ 2.22
NPC2-206ENST00000555592 ARHGEF5Q12774 1597 aa28.94■■■□□ 2.22
NPC2-206ENST00000555592 RSPH4AQ5TD94 716 aa28.94■■■□□ 2.22
NPC2-206ENST00000555592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.93■■■□□ 2.22
NPC2-206ENST00000555592 PIP4K2BP78356 416 aa28.92■■■□□ 2.22
NPC2-206ENST00000555592 NLRP1Q9C000 1473 aa28.91■■■□□ 2.22
NPC2-206ENST00000555592 ANKLE2Q86XL3 938 aa28.91■■■□□ 2.22
NPC2-206ENST00000555592 MIA2Q96PC5 1412 aa28.91■■■□□ 2.22
NPC2-206ENST00000555592 UGGT1Q9NYU2 1555 aa28.91■■■□□ 2.22
NPC2-206ENST00000555592 VWDEQ8N2E2 1590 aa28.9■■■□□ 2.22
NPC2-206ENST00000555592 HSPA1LP34931 641 aa28.89■■■□□ 2.22
NPC2-206ENST00000555592 THEMISQ8N1K5 641 aaPredicted RBP28.89■■■□□ 2.22
NPC2-206ENST00000555592 DEPDC5O75140 1603 aa28.89■■■□□ 2.22
NPC2-206ENST00000555592 TOM1O60784 492 aa28.88■■■□□ 2.21
NPC2-206ENST00000555592 RNF17Q9BXT8 1623 aaKnown RBP28.87■■■□□ 2.21
NPC2-206ENST00000555592 MED1Q15648 1581 aaPredicted RBP28.87■■■□□ 2.21
NPC2-206ENST00000555592 CFAP65Q6ZU64 1925 aaKnown RBP28.86■■■□□ 2.21
NPC2-206ENST00000555592 TSPY4P0CV99 314 aa28.86■■■□□ 2.21
NPC2-206ENST00000555592 TSPY10P0CW01 314 aa28.86■■■□□ 2.21
NPC2-206ENST00000555592 IQGAP1P46940 1657 aa28.86■■■□□ 2.21
NPC2-206ENST00000555592 NPHP4O75161 1426 aaPredicted RBP28.86■■■□□ 2.21
NPC2-206ENST00000555592 ZC3H13Q5T200 1668 aaKnown RBP28.85■■■□□ 2.21
NPC2-206ENST00000555592 MED14O60244 1454 aa28.84■■■□□ 2.21
NPC2-206ENST00000555592 ABCC3O15438 1527 aa28.82■■■□□ 2.2
NPC2-206ENST00000555592 MAST1Q9Y2H9 1570 aa28.81■■■□□ 2.2
NPC2-206ENST00000555592 STRCP1A6NGW2 1772 aa28.8■■■□□ 2.2
NPC2-206ENST00000555592 CEP152O94986 1710 aa28.8■■■□□ 2.2
NPC2-206ENST00000555592 EIF2AK4Q9P2K8 1649 aaKnown RBP28.8■■■□□ 2.2
NPC2-206ENST00000555592 ALKQ9UM73 1620 aa28.78■■■□□ 2.2
NPC2-206ENST00000555592 LRRC9Q6ZRR7 1453 aa28.77■■■□□ 2.2
NPC2-206ENST00000555592 MROH1Q8NDA8 1641 aa28.76■■■□□ 2.19
NPC2-206ENST00000555592 ERVK-7P63135 1459 aa28.74■■■□□ 2.19
NPC2-206ENST00000555592 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
NPC2-206ENST00000555592 SYNMO15061 1565 aa28.71■■■□□ 2.19
NPC2-206ENST00000555592 VPS8Q8N3P4 1428 aa28.7■■■□□ 2.19
NPC2-206ENST00000555592 LRRC7Q96NW7 1537 aa28.69■■■□□ 2.18
NPC2-206ENST00000555592 SENP3Q9H4L4 574 aaPredicted RBP28.65■■■□□ 2.18
NPC2-206ENST00000555592 DUOX2Q9NRD8 1548 aa28.64■■■□□ 2.18
NPC2-206ENST00000555592 MYOM3Q5VTT5 1437 aa28.64■■■□□ 2.18
NPC2-206ENST00000555592 KANK4Q5T7N3 995 aaPredicted RBP28.63■■■□□ 2.17
NPC2-206ENST00000555592 PHF23Q9BUL5 403 aaPredicted RBP28.63■■■□□ 2.17
NPC2-206ENST00000555592 SCAF11Q99590 1463 aaKnown RBP28.62■■■□□ 2.17
NPC2-206ENST00000555592 CROCC2H7BZ55 1655 aa28.61■■■□□ 2.17
NPC2-206ENST00000555592 MAP3K1Q13233 1512 aa28.6■■■□□ 2.17
NPC2-206ENST00000555592 XIRP1Q702N8 1843 aaKnown RBP28.59■■■□□ 2.17
NPC2-206ENST00000555592 PRDM15P57071 1507 aaPredicted RBP28.58■■■□□ 2.17
NPC2-206ENST00000555592 SLIT1O75093 1534 aa28.56■■■□□ 2.16
NPC2-206ENST00000555592 ARHGAP23Q9P227 1491 aa28.56■■■□□ 2.16
NPC2-206ENST00000555592 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
NPC2-206ENST00000555592 KIF15Q9NS87 1388 aa28.54■■■□□ 2.16
NPC2-206ENST00000555592 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
NPC2-206ENST00000555592 LTKP29376 864 aa28.54■■■□□ 2.16
NPC2-206ENST00000555592 ARHGAP31Q2M1Z3 1444 aa28.53■■■□□ 2.16
NPC2-206ENST00000555592 TXNDC2Q86VQ3 553 aa28.53■■■□□ 2.16
NPC2-206ENST00000555592 ERBINQ96RT1 1412 aa28.52■■■□□ 2.16
NPC2-206ENST00000555592 PTPN23Q9H3S7 1636 aa28.51■■■□□ 2.15
NPC2-206ENST00000555592 RRP7BPQ9NSQ0 103 aa28.49■■■□□ 2.15
NPC2-206ENST00000555592 ABCC5O15440 1437 aa28.49■■■□□ 2.15
NPC2-206ENST00000555592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.48■■■□□ 2.15
NPC2-206ENST00000555592 EID1Q9Y6B2 187 aa28.48■■■□□ 2.15
NPC2-206ENST00000555592 KDM5AP29375 1690 aaKnown RBP28.43■■■□□ 2.14
NPC2-206ENST00000555592 TMEM2Q9UHN6 1383 aa28.43■■■□□ 2.14
NPC2-206ENST00000555592 KANK1Q14678 1352 aa28.42■■■□□ 2.14
NPC2-206ENST00000555592 STAG3Q9UJ98 1225 aa28.42■■■□□ 2.14
NPC2-206ENST00000555592 DAPK1P53355 1430 aa28.42■■■□□ 2.14
NPC2-206ENST00000555592 EFCAB6Q5THR3 1501 aa28.41■■■□□ 2.14
NPC2-206ENST00000555592 LMTK2Q8IWU2 1503 aa28.36■■■□□ 2.13
NPC2-206ENST00000555592 FGD6Q6ZV73 1430 aa28.35■■■□□ 2.13
NPC2-206ENST00000555592 TMEM94Q12767 1356 aa28.34■■■□□ 2.13
NPC2-206ENST00000555592 APLP2Q06481 763 aa28.33■■■□□ 2.13
NPC2-206ENST00000555592 IDI1Q13907 227 aa28.33■■■□□ 2.13
NPC2-206ENST00000555592 RGS17Q9UGC6 210 aaPredicted RBP28.33■■■□□ 2.13
NPC2-206ENST00000555592 CHIC2Q9UKJ5 165 aa28.33■■■□□ 2.13
NPC2-206ENST00000555592 FAM135BQ49AJ0 1406 aa28.33■■■□□ 2.13
NPC2-206ENST00000555592 ROBO1Q9Y6N7 1651 aa28.32■■■□□ 2.12
NPC2-206ENST00000555592 ANKRD30AQ9BXX3 1397 aa28.32■■■□□ 2.12
NPC2-206ENST00000555592 TET3O43151 1660 aa28.32■■■□□ 2.12
NPC2-206ENST00000555592 ADGRB3O60242 1522 aa28.3■■■□□ 2.12
NPC2-206ENST00000555592 SLC26A8Q96RN1 970 aa28.3■■■□□ 2.12
NPC2-206ENST00000555592 KCNA6P17658 529 aa28.29■■■□□ 2.12
NPC2-206ENST00000555592 MYO5BQ9ULV0 1848 aa28.28■■■□□ 2.12
NPC2-206ENST00000555592 NOS1P29475 1434 aa28.27■■■□□ 2.12
NPC2-206ENST00000555592 PROSER2Q86WR7 435 aaPredicted RBP28.27■■■□□ 2.12
NPC2-206ENST00000555592 RBM33Q96EV2 1170 aaKnown RBP28.26■■■□□ 2.11
NPC2-206ENST00000555592 NWD1Q149M9 1564 aa28.25■■■□□ 2.11
NPC2-206ENST00000555592 NKTRP30414 1462 aaKnown RBP28.23■■■□□ 2.11
NPC2-206ENST00000555592 BCANQ96GW7 911 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms