RNA–Protein interactions for RNA: ENST00000555592.1

NPC2-206, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-206ENST00000555592 NISCHQ9Y2I1 1504 aa45.84■■■■■ 4.93
NPC2-206ENST00000555592 ABCC9O60706 1549 aa41.66■■■■■ 4.26
NPC2-206ENST00000555592 CCDC180Q9P1Z9 1646 aa41.35■■■■■ 4.21
NPC2-206ENST00000555592 RB1CC1Q8TDY2 1594 aa39.5■■■■□ 3.91
NPC2-206ENST00000555592 DNAJC5BQ9UF47 199 aa39.34■■■■□ 3.89
NPC2-206ENST00000555592 NACADO15069 1562 aa39.12■■■■□ 3.85
NPC2-206ENST00000555592 DCAF8L2P0C7V8 631 aa38.85■■■■□ 3.81
NPC2-206ENST00000555592 UNC13AQ9UPW8 1703 aa38.73■■■■□ 3.79
NPC2-206ENST00000555592 PABPN1Q86U42 306 aaKnown RBP eCLIP38.69■■■■□ 3.78
NPC2-206ENST00000555592 MYO15BQ96JP2 1530 aa38.42■■■■□ 3.74
NPC2-206ENST00000555592 BICRAQ9NZM4 1560 aa38.37■■■■□ 3.73
NPC2-206ENST00000555592 ZCCHC6Q5VYS8 1495 aaKnown RBP37.91■■■■□ 3.66
NPC2-206ENST00000555592 DCAF1Q9Y4B6 1507 aa37.82■■■■□ 3.64
NPC2-206ENST00000555592 SHROOM4Q9ULL8 1493 aa37.75■■■■□ 3.63
NPC2-206ENST00000555592 SCRIBQ14160 1630 aa37.67■■■■□ 3.62
NPC2-206ENST00000555592 CC2D2AQ9P2K1 1620 aa37.63■■■■□ 3.61
NPC2-206ENST00000555592 CECR2Q9BXF3 1484 aa37.54■■■■□ 3.6
NPC2-206ENST00000555592 EIF4G1Q04637 1599 aaKnown RBP37.45■■■■□ 3.59
NPC2-206ENST00000555592 DNAJC5Q9H3Z4 198 aa36.36■■■■□ 3.41
NPC2-206ENST00000555592 NCAPD3P42695 1498 aa36.08■■■■□ 3.37
NPC2-206ENST00000555592 CUX2O14529 1486 aa36.01■■■■□ 3.36
NPC2-206ENST00000555592 ERCC6Q03468 1493 aa35.99■■■■□ 3.35
NPC2-206ENST00000555592 ATAD2BQ9ULI0 1458 aa35.94■■■■□ 3.34
NPC2-206ENST00000555592 SMARCA4P51532 1647 aa35.88■■■■□ 3.33
NPC2-206ENST00000555592 SMARCA2P51531 1590 aa35.85■■■■□ 3.33
NPC2-206ENST00000555592 HMGXB3Q12766 1538 aa35.83■■■■□ 3.33
NPC2-206ENST00000555592 NESP48681 1621 aa35.69■■■■□ 3.3
NPC2-206ENST00000555592 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
NPC2-206ENST00000555592 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
NPC2-206ENST00000555592 PEG3Q9GZU2 1588 aa35.49■■■■□ 3.27
NPC2-206ENST00000555592 THOC2Q8NI27 1593 aaKnown RBP35.42■■■■□ 3.26
NPC2-206ENST00000555592 LAMC3Q9Y6N6 1575 aa35.38■■■■□ 3.25
NPC2-206ENST00000555592 MROH2BQ7Z745 1585 aa35.34■■■■□ 3.25
NPC2-206ENST00000555592 KIF21AQ7Z4S6 1674 aa35.3■■■■□ 3.24
NPC2-206ENST00000555592 PDS5BQ9NTI5 1447 aa35.14■■■■□ 3.22
NPC2-206ENST00000555592 CADPSQ9ULU8 1353 aa34.97■■■■□ 3.19
NPC2-206ENST00000555592 WIZO95785 1651 aa34.95■■■■□ 3.18
NPC2-206ENST00000555592 MRC2Q9UBG0 1479 aa34.89■■■■□ 3.18
NPC2-206ENST00000555592 WDR62O43379 1518 aa34.82■■■■□ 3.16
NPC2-206ENST00000555592 CEP164Q9UPV0 1460 aa34.69■■■■□ 3.14
NPC2-206ENST00000555592 TRIM41Q8WV44 630 aa34.68■■■■□ 3.14
NPC2-206ENST00000555592 FANCD2Q9BXW9 1451 aa34.61■■■■□ 3.13
NPC2-206ENST00000555592 CFTRP13569 1480 aa34.51■■■■□ 3.11
NPC2-206ENST00000555592 RSF1Q96T23 1441 aaPredicted RBP34.44■■■■□ 3.1
NPC2-206ENST00000555592 TOP2AP11388 1531 aaKnown RBP34.44■■■■□ 3.1
NPC2-206ENST00000555592 URB2Q14146 1524 aaKnown RBP34.36■■■■□ 3.09
NPC2-206ENST00000555592 PRDM2Q13029 1718 aa34.3■■■■□ 3.08
NPC2-206ENST00000555592 OSCARQ8IYS5 282 aa34.28■■■■□ 3.08
NPC2-206ENST00000555592 CCDC88BA6NC98 1476 aa34.02■■■■□ 3.04
NPC2-206ENST00000555592 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
NPC2-206ENST00000555592 IFT140Q96RY7 1462 aa33.99■■■■□ 3.03
NPC2-206ENST00000555592 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
NPC2-206ENST00000555592 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
NPC2-206ENST00000555592 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
NPC2-206ENST00000555592 TOPBP1Q92547 1522 aa33.93■■■■□ 3.02
NPC2-206ENST00000555592 EIF4G3O43432 1585 aaKnown RBP33.83■■■■□ 3.01
NPC2-206ENST00000555592 ABCC8Q09428 1581 aa33.8■■■■□ 3
NPC2-206ENST00000555592 ARHGEF11O15085 1522 aa33.79■■■■□ 3
NPC2-206ENST00000555592 DNMBPQ6XZF7 1577 aa33.79■■■■□ 3
NPC2-206ENST00000555592 CHD1O14646 1710 aa33.71■■■□□ 2.99
NPC2-206ENST00000555592 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
NPC2-206ENST00000555592 AQRO60306 1485 aaKnown RBP eCLIP33.63■■■□□ 2.97
NPC2-206ENST00000555592 POLA1P09884 1462 aaPredicted RBP33.55■■■□□ 2.96
NPC2-206ENST00000555592 CYB5RLQ6IPT4 315 aa33.53■■■□□ 2.96
NPC2-206ENST00000555592 FBLN2P98095 1184 aa33.48■■■□□ 2.95
NPC2-206ENST00000555592 RAD54L2Q9Y4B4 1467 aa33.44■■■□□ 2.94
NPC2-206ENST00000555592 ARAP1Q96P48 1450 aa33.43■■■□□ 2.94
NPC2-206ENST00000555592 SOGA1O94964 1423 aa33.37■■■□□ 2.93
NPC2-206ENST00000555592 TDRD9Q8NDG6 1382 aaKnown RBP33.36■■■□□ 2.93
NPC2-206ENST00000555592 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
NPC2-206ENST00000555592 TRHP20396 242 aaPredicted RBP33.29■■■□□ 2.92
NPC2-206ENST00000555592 SNAPC4Q5SXM2 1469 aa33.29■■■□□ 2.92
NPC2-206ENST00000555592 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
NPC2-206ENST00000555592 CUX1P39880 1505 aa33.23■■■□□ 2.91
NPC2-206ENST00000555592 CLASP1Q7Z460 1538 aa33.22■■■□□ 2.91
NPC2-206ENST00000555592 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
NPC2-206ENST00000555592 MAGI1Q96QZ7 1491 aaPredicted RBP33.17■■■□□ 2.9
NPC2-206ENST00000555592 CHMP7Q8WUX9 453 aaPredicted RBP33.15■■■□□ 2.9
NPC2-206ENST00000555592 GRIN2BQ13224 1484 aa33.13■■■□□ 2.89
NPC2-206ENST00000555592 PBRM1Q86U86 1689 aa33.09■■■□□ 2.89
NPC2-206ENST00000555592 SYNJ2O15056 1496 aa33.06■■■□□ 2.88
NPC2-206ENST00000555592 GAPVD1Q14C86 1478 aa32.98■■■□□ 2.87
NPC2-206ENST00000555592 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
NPC2-206ENST00000555592 ABCA10Q8WWZ4 1543 aa32.88■■■□□ 2.85
NPC2-206ENST00000555592 GRIN2AQ12879 1464 aa32.72■■■□□ 2.83
NPC2-206ENST00000555592 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.83
NPC2-206ENST00000555592 SUPT5HO00267 1087 aaKnown RBP32.69■■■□□ 2.82
NPC2-206ENST00000555592 ADAMTS12P58397 1594 aa32.69■■■□□ 2.82
NPC2-206ENST00000555592 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
NPC2-206ENST00000555592 CEP170Q5SW79 1584 aa32.65■■■□□ 2.82
NPC2-206ENST00000555592 BIVM-ERCC5R4GMW8 1640 aa32.64■■■□□ 2.82
NPC2-206ENST00000555592 TOP2BQ02880 1626 aa32.6■■■□□ 2.81
NPC2-206ENST00000555592 NUP160Q12769 1436 aa32.6■■■□□ 2.81
NPC2-206ENST00000555592 AEBP2Q6ZN18 517 aaPredicted RBP32.57■■■□□ 2.8
NPC2-206ENST00000555592 SHROOM2Q13796 1616 aa32.55■■■□□ 2.8
NPC2-206ENST00000555592 FHAD1B1AJZ9 1412 aa32.52■■■□□ 2.8
NPC2-206ENST00000555592 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
NPC2-206ENST00000555592 KIF13AQ9H1H9 1805 aa32.38■■■□□ 2.77
NPC2-206ENST00000555592 PRG4Q92954 1404 aaPredicted RBP32.33■■■□□ 2.77
NPC2-206ENST00000555592 JPH4Q96JJ6 628 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms