RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 POLR1AO95602 1720 aaPredicted RBP27.81■■■□□ 2.04
PKP3-208ENST00000531857 KIF3BO15066 747 aa27.8■■■□□ 2.04
PKP3-208ENST00000531857 FBXO31Q5XUX0 539 aaPredicted RBP27.78■■■□□ 2.04
PKP3-208ENST00000531857 KDM5DQ9BY66 1539 aa27.77■■■□□ 2.04
PKP3-208ENST00000531857 UBAP1LF5GYI3 381 aa27.77■■■□□ 2.04
PKP3-208ENST00000531857 PZPP20742 1482 aa27.75■■■□□ 2.03
PKP3-208ENST00000531857 TNRQ92752 1358 aa27.74■■■□□ 2.03
PKP3-208ENST00000531857 NEURL4Q96JN8 1562 aa27.74■■■□□ 2.03
PKP3-208ENST00000531857 SOCS7O14512 581 aa27.74■■■□□ 2.03
PKP3-208ENST00000531857 ARHGEF5Q12774 1597 aa27.73■■■□□ 2.03
PKP3-208ENST00000531857 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
PKP3-208ENST00000531857 RSPH4AQ5TD94 716 aa27.71■■■□□ 2.03
PKP3-208ENST00000531857 WASHC2CQ9Y4E1 1318 aa27.7■■■□□ 2.03
PKP3-208ENST00000531857 MIA2Q96PC5 1412 aa27.64■■■□□ 2.02
PKP3-208ENST00000531857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.63■■■□□ 2.012e-6■■■■■ 28.3
PKP3-208ENST00000531857 TSPY4P0CV99 314 aa27.63■■■□□ 2.01
PKP3-208ENST00000531857 TSPY10P0CW01 314 aa27.63■■■□□ 2.01
PKP3-208ENST00000531857 LRRC9Q6ZRR7 1453 aa27.63■■■□□ 2.01
PKP3-208ENST00000531857 RNF17Q9BXT8 1623 aaKnown RBP27.63■■■□□ 2.01
PKP3-208ENST00000531857 SHANK2Q9UPX8 1470 aa27.62■■■□□ 2.01
PKP3-208ENST00000531857 UGGT1Q9NYU2 1555 aa27.61■■■□□ 2.01
PKP3-208ENST00000531857 NLRP1Q9C000 1473 aa27.61■■■□□ 2.01
PKP3-208ENST00000531857 CPS1P31327 1500 aa27.61■■■□□ 2.01
PKP3-208ENST00000531857 MAST1Q9Y2H9 1570 aa27.6■■■□□ 2.01
PKP3-208ENST00000531857 VWDEQ8N2E2 1590 aa27.6■■■□□ 2.01
PKP3-208ENST00000531857 CFAP65Q6ZU64 1925 aaKnown RBP27.59■■■□□ 2.01
PKP3-208ENST00000531857 ANKLE2Q86XL3 938 aa27.59■■■□□ 2.01
PKP3-208ENST00000531857 DEPDC5O75140 1603 aa27.59■■■□□ 2.01
PKP3-208ENST00000531857 ZC3H13Q5T200 1668 aaKnown RBP27.59■■■□□ 2.01
PKP3-208ENST00000531857 VPS8Q8N3P4 1428 aa27.58■■■□□ 2.01
PKP3-208ENST00000531857 THEMISQ8N1K5 641 aaPredicted RBP27.58■■■□□ 2.01
PKP3-208ENST00000531857 ABCC3O15438 1527 aa27.57■■■□□ 2
PKP3-208ENST00000531857 EIF2AK4Q9P2K8 1649 aaKnown RBP27.56■■■□□ 2
PKP3-208ENST00000531857 CEP152O94986 1710 aa27.55■■■□□ 2
PKP3-208ENST00000531857 MROH1Q8NDA8 1641 aa27.55■■■□□ 2
PKP3-208ENST00000531857 IQGAP1P46940 1657 aa27.55■■■□□ 2
PKP3-208ENST00000531857 LOC105371045A0A1W2PR82 267 aa27.54■■■□□ 2
PKP3-208ENST00000531857 MED14O60244 1454 aa27.54■■■□□ 2
PKP3-208ENST00000531857 NPHP4O75161 1426 aaPredicted RBP27.54■■■□□ 2
PKP3-208ENST00000531857 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
PKP3-208ENST00000531857 PIP4K2BP78356 416 aa27.53■■■□□ 2
PKP3-208ENST00000531857 KANK4Q5T7N3 995 aaPredicted RBP27.53■■■□□ 2
PKP3-208ENST00000531857 STRCP1A6NGW2 1772 aa27.53■■■□□ 2
PKP3-208ENST00000531857 HSPA1LP34931 641 aa27.52■■■□□ 2
PKP3-208ENST00000531857 TOM1O60784 492 aa27.5■■□□□ 1.99
PKP3-208ENST00000531857 ERVK-7P63135 1459 aa27.49■■□□□ 1.99
PKP3-208ENST00000531857 ALKQ9UM73 1620 aa27.49■■□□□ 1.99
PKP3-208ENST00000531857 MYOM3Q5VTT5 1437 aa27.48■■□□□ 1.99
PKP3-208ENST00000531857 MAP3K1Q13233 1512 aa27.47■■□□□ 1.99
PKP3-208ENST00000531857 UBR1Q8IWV7 1749 aa27.47■■□□□ 1.99
PKP3-208ENST00000531857 MED1Q15648 1581 aaPredicted RBP27.45■■□□□ 1.99
PKP3-208ENST00000531857 CROCC2H7BZ55 1655 aa27.43■■□□□ 1.98
PKP3-208ENST00000531857 DUOX2Q9NRD8 1548 aa27.42■■□□□ 1.98
PKP3-208ENST00000531857 LRRC7Q96NW7 1537 aa27.38■■□□□ 1.97
PKP3-208ENST00000531857 SYNMO15061 1565 aa27.36■■□□□ 1.97
PKP3-208ENST00000531857 PRDM15P57071 1507 aaPredicted RBP27.36■■□□□ 1.97
PKP3-208ENST00000531857 PTPN23Q9H3S7 1636 aa27.35■■□□□ 1.97
PKP3-208ENST00000531857 KIF15Q9NS87 1388 aa27.35■■□□□ 1.97
PKP3-208ENST00000531857 ABCC5O15440 1437 aa27.33■■□□□ 1.97
PKP3-208ENST00000531857 SCAF11Q99590 1463 aaKnown RBP27.32■■□□□ 1.96
PKP3-208ENST00000531857 XIRP1Q702N8 1843 aaKnown RBP27.32■■□□□ 1.96
PKP3-208ENST00000531857 LTKP29376 864 aa27.31■■□□□ 1.96
PKP3-208ENST00000531857 RRP7BPQ9NSQ0 103 aa27.31■■□□□ 1.96
PKP3-208ENST00000531857 ARHGAP23Q9P227 1491 aa27.31■■□□□ 1.96
PKP3-208ENST00000531857 SLIT1O75093 1534 aa27.31■■□□□ 1.96
PKP3-208ENST00000531857 PIK3C2BO00750 1634 aa27.3■■□□□ 1.96
PKP3-208ENST00000531857 ARHGAP31Q2M1Z3 1444 aa27.3■■□□□ 1.96
PKP3-208ENST00000531857 ERBINQ96RT1 1412 aa27.3■■□□□ 1.96
PKP3-208ENST00000531857 SENP3Q9H4L4 574 aaPredicted RBP27.28■■□□□ 1.96
PKP3-208ENST00000531857 TXNDC2Q86VQ3 553 aa27.27■■□□□ 1.96
PKP3-208ENST00000531857 DAPK1P53355 1430 aa27.26■■□□□ 1.95
PKP3-208ENST00000531857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.26■■□□□ 1.95
PKP3-208ENST00000531857 FGD6Q6ZV73 1430 aa27.2■■□□□ 1.94
PKP3-208ENST00000531857 KDM5AP29375 1690 aaKnown RBP27.2■■□□□ 1.94
PKP3-208ENST00000531857 EID1Q9Y6B2 187 aa27.18■■□□□ 1.94
PKP3-208ENST00000531857 KANK1Q14678 1352 aa27.18■■□□□ 1.94
PKP3-208ENST00000531857 TMEM2Q9UHN6 1383 aa27.18■■□□□ 1.94
PKP3-208ENST00000531857 APLP2Q06481 763 aa27.17■■□□□ 1.94
PKP3-208ENST00000531857 PHF23Q9BUL5 403 aaPredicted RBP27.17■■□□□ 1.94
PKP3-208ENST00000531857 CHIC2Q9UKJ5 165 aa27.17■■□□□ 1.94
PKP3-208ENST00000531857 EFCAB6Q5THR3 1501 aa27.16■■□□□ 1.94
PKP3-208ENST00000531857 LMTK2Q8IWU2 1503 aa27.16■■□□□ 1.94
PKP3-208ENST00000531857 ANKRD30AQ9BXX3 1397 aa27.13■■□□□ 1.93
PKP3-208ENST00000531857 IDI1Q13907 227 aa27.13■■□□□ 1.93
PKP3-208ENST00000531857 STAG3Q9UJ98 1225 aa27.13■■□□□ 1.93
PKP3-208ENST00000531857 TET3O43151 1660 aa27.1■■□□□ 1.93
PKP3-208ENST00000531857 NOS1P29475 1434 aa27.07■■□□□ 1.92
PKP3-208ENST00000531857 MYO5BQ9ULV0 1848 aa27.07■■□□□ 1.92
PKP3-208ENST00000531857 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
PKP3-208ENST00000531857 SLC26A8Q96RN1 970 aa27.05■■□□□ 1.92
PKP3-208ENST00000531857 TMEM94Q12767 1356 aa27.05■■□□□ 1.92
PKP3-208ENST00000531857 ADGRL2O95490 1459 aa27.04■■□□□ 1.92
PKP3-208ENST00000531857 KCNA6P17658 529 aa27.03■■□□□ 1.92
PKP3-208ENST00000531857 RBM33Q96EV2 1170 aaKnown RBP27.02■■□□□ 1.92
PKP3-208ENST00000531857 ROBO1Q9Y6N7 1651 aa27.01■■□□□ 1.92
PKP3-208ENST00000531857 FAM135BQ49AJ0 1406 aa27.01■■□□□ 1.91
PKP3-208ENST00000531857 RGS17Q9UGC6 210 aaPredicted RBP27.01■■□□□ 1.91
PKP3-208ENST00000531857 NWD1Q149M9 1564 aa26.99■■□□□ 1.91
PKP3-208ENST00000531857 GCC2Q8IWJ2 1684 aa26.98■■□□□ 1.91
PKP3-208ENST00000531857 PROSER2Q86WR7 435 aaPredicted RBP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms