RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 DDX3XO00571 662 aaKnown RBP eCLIP17.14■□□□□ 0.333e-24■■■■■ 37.6
PKP3-208ENST00000531857 TROVE2P10155 538 aaKnown RBP eCLIP15.58■□□□□ 0.085e-10■■■□□ 18
PKP3-208ENST00000531857 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.36■■□□□ 1.014e-9■■■□□ 14.6
PKP3-208ENST00000531857 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 18e-9■■■□□ 14.8
PKP3-208ENST00000531857 HNRNPKP61978 463 aaKnown RBP eCLIP17.67■□□□□ 0.421e-8■■■■□ 22.4
PKP3-208ENST00000531857 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.9■□□□□ 0.942e-8■■■■■ 56.1
PKP3-208ENST00000531857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.09■■■□□ 2.253e-8■□□□□ 9.7
PKP3-208ENST00000531857 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.21□□□□□ -0.132e-7■■■□□ 15.9
PKP3-208ENST00000531857 FMR1Q06787 632 aaKnown RBP eCLIP22.88■■□□□ 1.253e-7■□□□□ 10.6
PKP3-208ENST00000531857 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.1■□□□□ 0.495e-7■■■■□ 23.7
PKP3-208ENST00000531857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.97e-7■■■■□ 23
PKP3-208ENST00000531857 AGGF1Q8N302 714 aaeCLIP16.2■□□□□ 0.188e-7■■■■□ 20
PKP3-208ENST00000531857 SF3B1O75533 1304 aaKnown RBP eCLIP19.18■□□□□ 0.661e-6■■■■■ 135.5
PKP3-208ENST00000531857 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.47■□□□□ 0.231e-6■■■■□ 24.8
PKP3-208ENST00000531857 FXR2P51116 673 aaKnown RBP eCLIP18.96■□□□□ 0.632e-6■□□□□ 9.5
PKP3-208ENST00000531857 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.12■□□□□ 0.172e-6■■■■■ 45.7
PKP3-208ENST00000531857 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.25■□□□□ 0.512e-6■■■■■ 352.1
PKP3-208ENST00000531857 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.54■□□□□ 0.882e-6■■■■□ 20.8
PKP3-208ENST00000531857 NIPBLQ6KC79 2804 aaeCLIP16.14■□□□□ 0.172e-6■■■■□ 19.3
PKP3-208ENST00000531857 NCBP2P52298 156 aaKnown RBP eCLIP15.49■□□□□ 0.072e-6■□□□□ 8.3
PKP3-208ENST00000531857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■■□ 25.3
PKP3-208ENST00000531857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.63■■■□□ 2.012e-6■■■■■ 28.3
PKP3-208ENST00000531857 EFTUD2Q15029 972 aaKnown RBP eCLIP15.97■□□□□ 0.152e-6■■■■■ 39.1
PKP3-208ENST00000531857 AQRO60306 1485 aaKnown RBP eCLIP32.14■■■□□ 2.742e-6■■■■■ 27.4
PKP3-208ENST00000531857 NONOQ15233 471 aaKnown RBP eCLIP19.37■□□□□ 0.693e-6■■□□□ 12.2
PKP3-208ENST00000531857 RBM15Q96T37 977 aaKnown RBP eCLIP17.45■□□□□ 0.385e-6■■□□□ 11.5
PKP3-208ENST00000531857 SF3B4Q15427 424 aaKnown RBP eCLIP15.8■□□□□ 0.126e-6■□□□□ 11
PKP3-208ENST00000531857 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.337e-6■■■□□ 16.7
PKP3-208ENST00000531857 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.729e-6■□□□□ 8.1
PKP3-208ENST00000531857 SMNDC1O75940 238 aaKnown RBP eCLIP15.67■□□□□ 0.19e-6■■■■□ 21.6
Retrieved 30 of 30 RNA–protein pairs in 238.4 ms