RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 KIF3BO15066 747 aa33.94■■■■□ 3.02
CHKA-206ENST00000531341 TNRQ92752 1358 aa33.87■■■■□ 3.01
CHKA-206ENST00000531341 CCDC141Q6ZP82 1450 aa33.85■■■■□ 3.01
CHKA-206ENST00000531341 CAMSAP2Q08AD1 1489 aa33.84■■■■□ 3.01
CHKA-206ENST00000531341 NCOA2Q15596 1464 aa33.84■■■■□ 3.01
CHKA-206ENST00000531341 NEURL4Q96JN8 1562 aa33.83■■■■□ 3.01
CHKA-206ENST00000531341 PZPP20742 1482 aa33.82■■■■□ 3.01
CHKA-206ENST00000531341 WASHC2CQ9Y4E1 1318 aa33.82■■■■□ 3.01
CHKA-206ENST00000531341 KDM5DQ9BY66 1539 aa33.81■■■■□ 3
CHKA-206ENST00000531341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.79■■■■□ 3
CHKA-206ENST00000531341 RSPH4AQ5TD94 716 aa33.77■■■■□ 3
CHKA-206ENST00000531341 PIP4K2BP78356 416 aa33.76■■■□□ 2.99
CHKA-206ENST00000531341 HSPA1LP34931 641 aa33.75■■■□□ 2.99
CHKA-206ENST00000531341 MIA2Q96PC5 1412 aa33.75■■■□□ 2.99
CHKA-206ENST00000531341 POLR1AO95602 1720 aaPredicted RBP33.75■■■□□ 2.99
CHKA-206ENST00000531341 SCAF1Q9H7N4 1312 aaKnown RBP33.75■■■□□ 2.99
CHKA-206ENST00000531341 SHANK2Q9UPX8 1470 aa33.75■■■□□ 2.99
CHKA-206ENST00000531341 ANKLE2Q86XL3 938 aa33.73■■■□□ 2.99
CHKA-206ENST00000531341 CPS1P31327 1500 aa33.7■■■□□ 2.99
CHKA-206ENST00000531341 FAM135AQ9P2D6 1515 aa33.7■■■□□ 2.99
CHKA-206ENST00000531341 THEMISQ8N1K5 641 aaPredicted RBP33.7■■■□□ 2.99
CHKA-206ENST00000531341 TSPY4P0CV99 314 aa33.69■■■□□ 2.98
CHKA-206ENST00000531341 TSPY10P0CW01 314 aa33.69■■■□□ 2.98
CHKA-206ENST00000531341 TOM1O60784 492 aa33.68■■■□□ 2.98
CHKA-206ENST00000531341 ARHGEF5Q12774 1597 aa33.67■■■□□ 2.98
CHKA-206ENST00000531341 VWDEQ8N2E2 1590 aa33.67■■■□□ 2.98
CHKA-206ENST00000531341 UGGT1Q9NYU2 1555 aa33.67■■■□□ 2.98
CHKA-206ENST00000531341 NLRP1Q9C000 1473 aa33.66■■■□□ 2.98
CHKA-206ENST00000531341 NPHP4O75161 1426 aaPredicted RBP33.63■■■□□ 2.97
CHKA-206ENST00000531341 MED14O60244 1454 aa33.63■■■□□ 2.97
CHKA-206ENST00000531341 ALKQ9UM73 1620 aa33.58■■■□□ 2.97
CHKA-206ENST00000531341 ABCC3O15438 1527 aa33.58■■■□□ 2.97
CHKA-206ENST00000531341 DEPDC5O75140 1603 aa33.57■■■□□ 2.97
CHKA-206ENST00000531341 LRRC9Q6ZRR7 1453 aa33.57■■■□□ 2.97
CHKA-206ENST00000531341 MED1Q15648 1581 aaPredicted RBP33.56■■■□□ 2.96
CHKA-206ENST00000531341 RNF17Q9BXT8 1623 aaKnown RBP33.55■■■□□ 2.96
CHKA-206ENST00000531341 KANK4Q5T7N3 995 aaPredicted RBP33.55■■■□□ 2.96
CHKA-206ENST00000531341 MAST1Q9Y2H9 1570 aa33.52■■■□□ 2.96
CHKA-206ENST00000531341 ERVK-7P63135 1459 aa33.5■■■□□ 2.95
CHKA-206ENST00000531341 IQGAP1P46940 1657 aa33.5■■■□□ 2.95
CHKA-206ENST00000531341 LOC105371045A0A1W2PR82 267 aa33.5■■■□□ 2.95
CHKA-206ENST00000531341 MROH1Q8NDA8 1641 aa33.5■■■□□ 2.95
CHKA-206ENST00000531341 STRCP1A6NGW2 1772 aa33.49■■■□□ 2.95
CHKA-206ENST00000531341 VPS8Q8N3P4 1428 aa33.49■■■□□ 2.95
CHKA-206ENST00000531341 SENP3Q9H4L4 574 aaPredicted RBP33.46■■■□□ 2.95
CHKA-206ENST00000531341 LRRC7Q96NW7 1537 aa33.46■■■□□ 2.95
CHKA-206ENST00000531341 ZC3H13Q5T200 1668 aaKnown RBP33.45■■■□□ 2.95
CHKA-206ENST00000531341 EIF2AK4Q9P2K8 1649 aaKnown RBP33.43■■■□□ 2.94
CHKA-206ENST00000531341 CEP152O94986 1710 aa33.4■■■□□ 2.94
CHKA-206ENST00000531341 LTKP29376 864 aa33.4■■■□□ 2.94
CHKA-206ENST00000531341 MYOM3Q5VTT5 1437 aa33.39■■■□□ 2.94
CHKA-206ENST00000531341 UBR1Q8IWV7 1749 aa33.37■■■□□ 2.93
CHKA-206ENST00000531341 CFAP65Q6ZU64 1925 aaKnown RBP33.37■■■□□ 2.93
CHKA-206ENST00000531341 DUOX2Q9NRD8 1548 aa33.35■■■□□ 2.93
CHKA-206ENST00000531341 SCAF11Q99590 1463 aaKnown RBP33.33■■■□□ 2.93
CHKA-206ENST00000531341 MAP3K1Q13233 1512 aa33.33■■■□□ 2.93
CHKA-206ENST00000531341 TXNDC2Q86VQ3 553 aa33.32■■■□□ 2.92
CHKA-206ENST00000531341 RRP7BPQ9NSQ0 103 aa33.32■■■□□ 2.92
CHKA-206ENST00000531341 PHF23Q9BUL5 403 aaPredicted RBP33.31■■■□□ 2.92
CHKA-206ENST00000531341 KIF15Q9NS87 1388 aa33.31■■■□□ 2.92
CHKA-206ENST00000531341 ARHGAP23Q9P227 1491 aa33.31■■■□□ 2.92
CHKA-206ENST00000531341 SYNMO15061 1565 aa33.3■■■□□ 2.92
CHKA-206ENST00000531341 ABCC5O15440 1437 aa33.28■■■□□ 2.92
CHKA-206ENST00000531341 ARHGAP31Q2M1Z3 1444 aa33.28■■■□□ 2.92
CHKA-206ENST00000531341 SLIT1O75093 1534 aa33.28■■■□□ 2.92
CHKA-206ENST00000531341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.27■■■□□ 2.923e-7■■□□□ 14
CHKA-206ENST00000531341 PRDM15P57071 1507 aaPredicted RBP33.25■■■□□ 2.91
CHKA-206ENST00000531341 ERBINQ96RT1 1412 aa33.22■■■□□ 2.91
CHKA-206ENST00000531341 EID1Q9Y6B2 187 aa33.2■■■□□ 2.91
CHKA-206ENST00000531341 PIK3C2BO00750 1634 aa33.19■■■□□ 2.9
CHKA-206ENST00000531341 XIRP1Q702N8 1843 aaKnown RBP33.18■■■□□ 2.9
CHKA-206ENST00000531341 CROCC2H7BZ55 1655 aa33.17■■■□□ 2.9
CHKA-206ENST00000531341 RGS17Q9UGC6 210 aaPredicted RBP33.17■■■□□ 2.9
CHKA-206ENST00000531341 TMEM2Q9UHN6 1383 aa33.17■■■□□ 2.9
CHKA-206ENST00000531341 PTPN23Q9H3S7 1636 aa33.17■■■□□ 2.9
CHKA-206ENST00000531341 DAPK1P53355 1430 aa33.16■■■□□ 2.9
CHKA-206ENST00000531341 IDI1Q13907 227 aa33.15■■■□□ 2.9
CHKA-206ENST00000531341 CHIC2Q9UKJ5 165 aa33.14■■■□□ 2.9
CHKA-206ENST00000531341 STAG3Q9UJ98 1225 aa33.13■■■□□ 2.89
CHKA-206ENST00000531341 RBM33Q96EV2 1170 aaKnown RBP33.1■■■□□ 2.89
CHKA-206ENST00000531341 KANK1Q14678 1352 aa33.09■■■□□ 2.89
CHKA-206ENST00000531341 SLC26A8Q96RN1 970 aa33.08■■■□□ 2.89
CHKA-206ENST00000531341 TMEM94Q12767 1356 aa33.07■■■□□ 2.88
CHKA-206ENST00000531341 FGD6Q6ZV73 1430 aa33.06■■■□□ 2.88
CHKA-206ENST00000531341 EFCAB6Q5THR3 1501 aa33.06■■■□□ 2.88
CHKA-206ENST00000531341 LMTK2Q8IWU2 1503 aa33.06■■■□□ 2.88
CHKA-206ENST00000531341 FAM135BQ49AJ0 1406 aa33.05■■■□□ 2.88
CHKA-206ENST00000531341 KCNA6P17658 529 aa33.04■■■□□ 2.88
CHKA-206ENST00000531341 TET3O43151 1660 aa33.04■■■□□ 2.88
CHKA-206ENST00000531341 ANKRD30AQ9BXX3 1397 aa33.02■■■□□ 2.88
CHKA-206ENST00000531341 APLP2Q06481 763 aa33.01■■■□□ 2.87
CHKA-206ENST00000531341 NOS1P29475 1434 aa33.01■■■□□ 2.87
CHKA-206ENST00000531341 PROSER2Q86WR7 435 aaPredicted RBP32.99■■■□□ 2.87
CHKA-206ENST00000531341 KDM5AP29375 1690 aaKnown RBP32.98■■■□□ 2.87
CHKA-206ENST00000531341 POTEAQ6S8J7 498 aa32.93■■■□□ 2.86
CHKA-206ENST00000531341 ADGRB3O60242 1522 aa32.92■■■□□ 2.86
CHKA-206ENST00000531341 ROBO1Q9Y6N7 1651 aa32.91■■■□□ 2.86
CHKA-206ENST00000531341 SLC52A1Q9NWF4 448 aa32.9■■■□□ 2.86
CHKA-206ENST00000531341 BCANQ96GW7 911 aa32.89■■■□□ 2.86
CHKA-206ENST00000531341 ADGRL2O95490 1459 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms