RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 KDM5DQ9BY66 1539 aa36.86■■■■□ 3.49
CALCOCO2-209ENST00000507076 KIF3BO15066 747 aa36.86■■■■□ 3.49
CALCOCO2-209ENST00000507076 ILDR2Q71H61 639 aa36.85■■■■□ 3.49
CALCOCO2-209ENST00000507076 ARHGEF5Q12774 1597 aa36.82■■■■□ 3.48
CALCOCO2-209ENST00000507076 FAM135AQ9P2D6 1515 aa36.8■■■■□ 3.48
CALCOCO2-209ENST00000507076 PZPP20742 1482 aa36.8■■■■□ 3.48
CALCOCO2-209ENST00000507076 FBXO31Q5XUX0 539 aaPredicted RBP36.79■■■■□ 3.48
CALCOCO2-209ENST00000507076 TNRQ92752 1358 aa36.78■■■■□ 3.48
CALCOCO2-209ENST00000507076 NEURL4Q96JN8 1562 aa36.76■■■■□ 3.48
CALCOCO2-209ENST00000507076 UBAP1LF5GYI3 381 aa36.75■■■■□ 3.47
CALCOCO2-209ENST00000507076 RSPH4AQ5TD94 716 aa36.74■■■■□ 3.47
CALCOCO2-209ENST00000507076 WASHC2CQ9Y4E1 1318 aa36.72■■■■□ 3.47
CALCOCO2-209ENST00000507076 LRRC9Q6ZRR7 1453 aa36.69■■■■□ 3.46
CALCOCO2-209ENST00000507076 VPS8Q8N3P4 1428 aa36.68■■■■□ 3.46
CALCOCO2-209ENST00000507076 RNF17Q9BXT8 1623 aaKnown RBP36.67■■■■□ 3.46
CALCOCO2-209ENST00000507076 TSPY4P0CV99 314 aa36.66■■■■□ 3.46
CALCOCO2-209ENST00000507076 TSPY10P0CW01 314 aa36.66■■■■□ 3.46
CALCOCO2-209ENST00000507076 MAST1Q9Y2H9 1570 aa36.66■■■■□ 3.46
CALCOCO2-209ENST00000507076 ZC3H13Q5T200 1668 aaKnown RBP36.63■■■■□ 3.45
CALCOCO2-209ENST00000507076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.62■■■■□ 3.45
CALCOCO2-209ENST00000507076 UGGT1Q9NYU2 1555 aa36.61■■■■□ 3.45
CALCOCO2-209ENST00000507076 MIA2Q96PC5 1412 aa36.61■■■■□ 3.45
CALCOCO2-209ENST00000507076 SOCS7O14512 581 aa36.61■■■■□ 3.45
CALCOCO2-209ENST00000507076 NLRP1Q9C000 1473 aa36.61■■■■□ 3.45
CALCOCO2-209ENST00000507076 EIF2AK4Q9P2K8 1649 aaKnown RBP36.59■■■■□ 3.45
CALCOCO2-209ENST00000507076 ABCC3O15438 1527 aa36.59■■■■□ 3.45
CALCOCO2-209ENST00000507076 CPS1P31327 1500 aa36.59■■■■□ 3.45
CALCOCO2-209ENST00000507076 CFAP65Q6ZU64 1925 aaKnown RBP36.58■■■■□ 3.45
CALCOCO2-209ENST00000507076 CEP152O94986 1710 aa36.58■■■■□ 3.45
CALCOCO2-209ENST00000507076 SHANK2Q9UPX8 1470 aa36.56■■■■□ 3.44
CALCOCO2-209ENST00000507076 LOC105371045A0A1W2PR82 267 aa36.56■■■■□ 3.44
CALCOCO2-209ENST00000507076 DEPDC5O75140 1603 aa36.56■■■■□ 3.44
CALCOCO2-209ENST00000507076 VWDEQ8N2E2 1590 aa36.54■■■■□ 3.44
CALCOCO2-209ENST00000507076 ANKLE2Q86XL3 938 aa36.54■■■■□ 3.44
CALCOCO2-209ENST00000507076 MROH1Q8NDA8 1641 aa36.54■■■■□ 3.44
CALCOCO2-209ENST00000507076 IQGAP1P46940 1657 aa36.52■■■■□ 3.44
CALCOCO2-209ENST00000507076 KANK4Q5T7N3 995 aaPredicted RBP36.52■■■■□ 3.44
CALCOCO2-209ENST00000507076 THEMISQ8N1K5 641 aaPredicted RBP36.52■■■■□ 3.44
CALCOCO2-209ENST00000507076 MAP3K1Q13233 1512 aa36.5■■■■□ 3.43
CALCOCO2-209ENST00000507076 SCAF1Q9H7N4 1312 aaKnown RBP36.5■■■■□ 3.43
CALCOCO2-209ENST00000507076 NPHP4O75161 1426 aaPredicted RBP36.5■■■■□ 3.43
CALCOCO2-209ENST00000507076 MYOM3Q5VTT5 1437 aa36.5■■■■□ 3.43
CALCOCO2-209ENST00000507076 MED14O60244 1454 aa36.48■■■■□ 3.43
CALCOCO2-209ENST00000507076 ERVK-7P63135 1459 aa36.47■■■■□ 3.43
CALCOCO2-209ENST00000507076 PIP4K2BP78356 416 aa36.45■■■■□ 3.43
CALCOCO2-209ENST00000507076 CROCC2H7BZ55 1655 aa36.45■■■■□ 3.42
CALCOCO2-209ENST00000507076 STRCP1A6NGW2 1772 aa36.44■■■■□ 3.42
CALCOCO2-209ENST00000507076 DUOX2Q9NRD8 1548 aa36.42■■■■□ 3.42
CALCOCO2-209ENST00000507076 UBR1Q8IWV7 1749 aa36.42■■■■□ 3.42
CALCOCO2-209ENST00000507076 TOM1O60784 492 aa36.4■■■■□ 3.42
CALCOCO2-209ENST00000507076 HSPA1LP34931 641 aa36.39■■■■□ 3.42
CALCOCO2-209ENST00000507076 ALKQ9UM73 1620 aa36.35■■■■□ 3.41
CALCOCO2-209ENST00000507076 PTPN23Q9H3S7 1636 aa36.34■■■■□ 3.41
CALCOCO2-209ENST00000507076 MED1Q15648 1581 aaPredicted RBP36.34■■■■□ 3.41
CALCOCO2-209ENST00000507076 PRDM15P57071 1507 aaPredicted RBP36.34■■■■□ 3.41
CALCOCO2-209ENST00000507076 KIF15Q9NS87 1388 aa36.3■■■■□ 3.4
CALCOCO2-209ENST00000507076 SYNMO15061 1565 aa36.3■■■■□ 3.4
CALCOCO2-209ENST00000507076 ABCC5O15440 1437 aa36.27■■■■□ 3.4
CALCOCO2-209ENST00000507076 LRRC7Q96NW7 1537 aa36.26■■■■□ 3.4
CALCOCO2-209ENST00000507076 ERBINQ96RT1 1412 aa36.25■■■■□ 3.39
CALCOCO2-209ENST00000507076 SCAF11Q99590 1463 aaKnown RBP36.24■■■■□ 3.39
CALCOCO2-209ENST00000507076 RRP7BPQ9NSQ0 103 aa36.23■■■■□ 3.39
CALCOCO2-209ENST00000507076 PIK3C2BO00750 1634 aa36.22■■■■□ 3.39
CALCOCO2-209ENST00000507076 DAPK1P53355 1430 aa36.2■■■■□ 3.39
CALCOCO2-209ENST00000507076 ARHGAP31Q2M1Z3 1444 aa36.2■■■■□ 3.39
CALCOCO2-209ENST00000507076 SLIT1O75093 1534 aa36.19■■■■□ 3.38
CALCOCO2-209ENST00000507076 ARHGAP23Q9P227 1491 aa36.18■■■■□ 3.38
CALCOCO2-209ENST00000507076 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.17■■■■□ 3.382e-7■■□□□ 12.9
CALCOCO2-209ENST00000507076 XIRP1Q702N8 1843 aaKnown RBP36.16■■■■□ 3.38
CALCOCO2-209ENST00000507076 APLP2Q06481 763 aa36.16■■■■□ 3.38
CALCOCO2-209ENST00000507076 LTKP29376 864 aa36.14■■■■□ 3.38
CALCOCO2-209ENST00000507076 SENP3Q9H4L4 574 aaPredicted RBP36.14■■■■□ 3.38
CALCOCO2-209ENST00000507076 FGD6Q6ZV73 1430 aa36.14■■■■□ 3.38
CALCOCO2-209ENST00000507076 TXNDC2Q86VQ3 553 aa36.12■■■■□ 3.37
CALCOCO2-209ENST00000507076 KANK1Q14678 1352 aa36.09■■■■□ 3.37
CALCOCO2-209ENST00000507076 KDM5AP29375 1690 aaKnown RBP36.07■■■■□ 3.36
CALCOCO2-209ENST00000507076 CHIC2Q9UKJ5 165 aa36.06■■■■□ 3.36
CALCOCO2-209ENST00000507076 ANKRD30AQ9BXX3 1397 aa36.04■■■■□ 3.36
CALCOCO2-209ENST00000507076 EID1Q9Y6B2 187 aa36.04■■■■□ 3.36
CALCOCO2-209ENST00000507076 LMTK2Q8IWU2 1503 aa36.03■■■■□ 3.36
CALCOCO2-209ENST00000507076 EFCAB6Q5THR3 1501 aa36.03■■■■□ 3.36
CALCOCO2-209ENST00000507076 TMEM2Q9UHN6 1383 aa36.02■■■■□ 3.36
CALCOCO2-209ENST00000507076 STAG3Q9UJ98 1225 aa36.01■■■■□ 3.36
CALCOCO2-209ENST00000507076 PHF23Q9BUL5 403 aaPredicted RBP36■■■■□ 3.35
CALCOCO2-209ENST00000507076 IDI1Q13907 227 aa35.94■■■■□ 3.34
CALCOCO2-209ENST00000507076 ADGRB3O60242 1522 aa35.93■■■■□ 3.34
CALCOCO2-209ENST00000507076 MYO5BQ9ULV0 1848 aa35.91■■■■□ 3.34
CALCOCO2-209ENST00000507076 ADGRL2O95490 1459 aa35.91■■■■□ 3.34
CALCOCO2-209ENST00000507076 NOS1P29475 1434 aa35.91■■■■□ 3.34
CALCOCO2-209ENST00000507076 TET3O43151 1660 aa35.88■■■■□ 3.33
CALCOCO2-209ENST00000507076 TMEM94Q12767 1356 aa35.84■■■■□ 3.33
CALCOCO2-209ENST00000507076 FAM50AQ14320 339 aaKnown RBP35.83■■■■□ 3.33
CALCOCO2-209ENST00000507076 SLC26A8Q96RN1 970 aa35.83■■■■□ 3.33
CALCOCO2-209ENST00000507076 GCC2Q8IWJ2 1684 aa35.83■■■■□ 3.33
CALCOCO2-209ENST00000507076 NWD1Q149M9 1564 aa35.8■■■■□ 3.32
CALCOCO2-209ENST00000507076 ROBO1Q9Y6N7 1651 aa35.79■■■■□ 3.32
CALCOCO2-209ENST00000507076 KCNA6P17658 529 aa35.79■■■■□ 3.32
CALCOCO2-209ENST00000507076 ANKRD50Q9ULJ7 1429 aa35.79■■■■□ 3.32
CALCOCO2-209ENST00000507076 RBM33Q96EV2 1170 aaKnown RBP35.77■■■■□ 3.32
CALCOCO2-209ENST00000507076 RPRD2Q5VT52 1461 aaKnown RBP35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms