RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 NISCHQ9Y2I1 1504 aa58.2■■■■■ 6.91
CALCOCO2-209ENST00000507076 ABCC9O60706 1549 aa52.6■■■■■ 6.01
CALCOCO2-209ENST00000507076 CCDC180Q9P1Z9 1646 aa52.41■■■■■ 5.98
CALCOCO2-209ENST00000507076 RB1CC1Q8TDY2 1594 aa49.95■■■■■ 5.59
CALCOCO2-209ENST00000507076 NACADO15069 1562 aa49.52■■■■■ 5.52
CALCOCO2-209ENST00000507076 DNAJC5BQ9UF47 199 aa49.46■■■■■ 5.51
CALCOCO2-209ENST00000507076 DCAF8L2P0C7V8 631 aa49.2■■■■■ 5.47
CALCOCO2-209ENST00000507076 UNC13AQ9UPW8 1703 aa49.01■■■■■ 5.44
CALCOCO2-209ENST00000507076 PABPN1Q86U42 306 aaKnown RBP eCLIP48.87■■■■■ 5.41
CALCOCO2-209ENST00000507076 MYO15BQ96JP2 1530 aa48.69■■■■■ 5.39
CALCOCO2-209ENST00000507076 BICRAQ9NZM4 1560 aa48.53■■■■■ 5.36
CALCOCO2-209ENST00000507076 ZCCHC6Q5VYS8 1495 aaKnown RBP48.2■■■■■ 5.31
CALCOCO2-209ENST00000507076 DCAF1Q9Y4B6 1507 aa48.02■■■■■ 5.28
CALCOCO2-209ENST00000507076 SCRIBQ14160 1630 aa47.78■■■■■ 5.24
CALCOCO2-209ENST00000507076 SHROOM4Q9ULL8 1493 aa47.74■■■■■ 5.23
CALCOCO2-209ENST00000507076 CC2D2AQ9P2K1 1620 aa47.53■■■■■ 5.2
CALCOCO2-209ENST00000507076 CECR2Q9BXF3 1484 aa47.36■■■■■ 5.17
CALCOCO2-209ENST00000507076 EIF4G1Q04637 1599 aaKnown RBP47.35■■■■■ 5.17
CALCOCO2-209ENST00000507076 NCAPD3P42695 1498 aa45.66■■■■■ 4.9
CALCOCO2-209ENST00000507076 ATAD2BQ9ULI0 1458 aa45.54■■■■■ 4.88
CALCOCO2-209ENST00000507076 SMARCA4P51532 1647 aa45.52■■■■■ 4.88
CALCOCO2-209ENST00000507076 DNAJC5Q9H3Z4 198 aa45.52■■■■■ 4.88
CALCOCO2-209ENST00000507076 SMARCA2P51531 1590 aa45.41■■■■■ 4.86
CALCOCO2-209ENST00000507076 ERCC6Q03468 1493 aa45.41■■■■■ 4.86
CALCOCO2-209ENST00000507076 HMGXB3Q12766 1538 aa45.37■■■■■ 4.85
CALCOCO2-209ENST00000507076 CUX2O14529 1486 aa45.36■■■■■ 4.85
CALCOCO2-209ENST00000507076 BAZ1AQ9NRL2 1556 aaPredicted RBP45.2■■■■■ 4.83
CALCOCO2-209ENST00000507076 NESP48681 1621 aa45.13■■■■■ 4.82
CALCOCO2-209ENST00000507076 BAZ1BQ9UIG0 1483 aaKnown RBP45.11■■■■■ 4.81
CALCOCO2-209ENST00000507076 PEG3Q9GZU2 1588 aa45.02■■■■■ 4.8
CALCOCO2-209ENST00000507076 MROH2BQ7Z745 1585 aa44.88■■■■■ 4.78
CALCOCO2-209ENST00000507076 THOC2Q8NI27 1593 aaKnown RBP44.76■■■■■ 4.76
CALCOCO2-209ENST00000507076 LAMC3Q9Y6N6 1575 aa44.75■■■■■ 4.75
CALCOCO2-209ENST00000507076 KIF21AQ7Z4S6 1674 aa44.65■■■■■ 4.74
CALCOCO2-209ENST00000507076 PDS5BQ9NTI5 1447 aa44.42■■■■■ 4.7
CALCOCO2-209ENST00000507076 WIZO95785 1651 aa44.41■■■■■ 4.7
CALCOCO2-209ENST00000507076 CADPSQ9ULU8 1353 aa44.26■■■■■ 4.68
CALCOCO2-209ENST00000507076 MRC2Q9UBG0 1479 aa44.12■■■■■ 4.65
CALCOCO2-209ENST00000507076 WDR62O43379 1518 aa44.04■■■■■ 4.64
CALCOCO2-209ENST00000507076 CEP164Q9UPV0 1460 aa43.91■■■■■ 4.62
CALCOCO2-209ENST00000507076 FANCD2Q9BXW9 1451 aa43.83■■■■■ 4.61
CALCOCO2-209ENST00000507076 RSF1Q96T23 1441 aaPredicted RBP43.81■■■■■ 4.6
CALCOCO2-209ENST00000507076 TOP2AP11388 1531 aaKnown RBP43.76■■■■■ 4.6
CALCOCO2-209ENST00000507076 CFTRP13569 1480 aa43.73■■■■■ 4.59
CALCOCO2-209ENST00000507076 TRIM41Q8WV44 630 aa43.53■■■■■ 4.56
CALCOCO2-209ENST00000507076 PRDM2Q13029 1718 aa43.51■■■■■ 4.56
CALCOCO2-209ENST00000507076 URB2Q14146 1524 aaKnown RBP43.51■■■■■ 4.56
CALCOCO2-209ENST00000507076 CCDC88BA6NC98 1476 aa43.23■■■■■ 4.51
CALCOCO2-209ENST00000507076 OSCARQ8IYS5 282 aa43.18■■■■■ 4.5
CALCOCO2-209ENST00000507076 ZNF608Q9ULD9 1512 aaPredicted RBP43.01■■■■■ 4.48
CALCOCO2-209ENST00000507076 IFT140Q96RY7 1462 aa43■■■■■ 4.47
CALCOCO2-209ENST00000507076 TOPBP1Q92547 1522 aa42.99■■■■■ 4.47
CALCOCO2-209ENST00000507076 DNMBPQ6XZF7 1577 aa42.83■■■■■ 4.45
CALCOCO2-209ENST00000507076 RIMBP3CA6NJZ7 1639 aa42.82■■■■■ 4.45
CALCOCO2-209ENST00000507076 RIMBP3BA6NNM3 1639 aa42.82■■■■■ 4.45
CALCOCO2-209ENST00000507076 RIMBP3Q9UFD9 1639 aa42.82■■■■■ 4.45
CALCOCO2-209ENST00000507076 EIF4G3O43432 1585 aaKnown RBP42.82■■■■■ 4.45
CALCOCO2-209ENST00000507076 ABCC8Q09428 1581 aa42.81■■■■■ 4.44
CALCOCO2-209ENST00000507076 TARBP1Q13395 1621 aaKnown RBP42.66■■■■■ 4.42
CALCOCO2-209ENST00000507076 CHD1O14646 1710 aa42.63■■■■■ 4.41
CALCOCO2-209ENST00000507076 ARHGEF11O15085 1522 aa42.61■■■■■ 4.41
CALCOCO2-209ENST00000507076 AQRO60306 1485 aaKnown RBP eCLIP42.55■■■■■ 4.46e-13■■■■□ 26.1
CALCOCO2-209ENST00000507076 POLA1P09884 1462 aaPredicted RBP42.53■■■■■ 4.4
CALCOCO2-209ENST00000507076 RAD54L2Q9Y4B4 1467 aa42.39■■■■■ 4.38
CALCOCO2-209ENST00000507076 FBLN2P98095 1184 aa42.31■■■■■ 4.36
CALCOCO2-209ENST00000507076 SOGA1O94964 1423 aa42.29■■■■■ 4.36
CALCOCO2-209ENST00000507076 FGD5Q6ZNL6 1462 aa42.25■■■■■ 4.35
CALCOCO2-209ENST00000507076 TDRD9Q8NDG6 1382 aaKnown RBP42.25■■■■■ 4.35
CALCOCO2-209ENST00000507076 CYB5RLQ6IPT4 315 aa42.24■■■■■ 4.35
CALCOCO2-209ENST00000507076 CUX1P39880 1505 aa42.18■■■■■ 4.34
CALCOCO2-209ENST00000507076 ARAP1Q96P48 1450 aa42.17■■■■■ 4.34
CALCOCO2-209ENST00000507076 WDR97A6NE52 1622 aa42.16■■■■■ 4.34
CALCOCO2-209ENST00000507076 SNAPC4Q5SXM2 1469 aa42.16■■■■■ 4.34
CALCOCO2-209ENST00000507076 CLASP1Q7Z460 1538 aa42.01■■■■■ 4.32
CALCOCO2-209ENST00000507076 MAGI1Q96QZ7 1491 aaPredicted RBP41.99■■■■■ 4.31
CALCOCO2-209ENST00000507076 GRIN2BQ13224 1484 aa41.96■■■■■ 4.31
CALCOCO2-209ENST00000507076 SYNJ1O43426 1573 aa41.96■■■■■ 4.31
CALCOCO2-209ENST00000507076 PBRM1Q86U86 1689 aa41.96■■■■■ 4.31
CALCOCO2-209ENST00000507076 CHMP7Q8WUX9 453 aaPredicted RBP41.92■■■■■ 4.3
CALCOCO2-209ENST00000507076 TRHP20396 242 aaPredicted RBP41.86■■■■■ 4.29
CALCOCO2-209ENST00000507076 SYNJ2O15056 1496 aa41.85■■■■■ 4.29
CALCOCO2-209ENST00000507076 GAPVD1Q14C86 1478 aa41.79■■■■■ 4.28
CALCOCO2-209ENST00000507076 ABCA5Q8WWZ7 1642 aa41.77■■■■■ 4.28
CALCOCO2-209ENST00000507076 SUPT5HO00267 1087 aaKnown RBP41.72■■■■■ 4.27
CALCOCO2-209ENST00000507076 ABCA10Q8WWZ4 1543 aa41.72■■■■■ 4.27
CALCOCO2-209ENST00000507076 BIVM-ERCC5R4GMW8 1640 aa41.5■■■■■ 4.23
CALCOCO2-209ENST00000507076 WRNQ14191 1432 aaPredicted RBP eCLIP41.47■■■■■ 4.23
CALCOCO2-209ENST00000507076 ADAMTS12P58397 1594 aa41.46■■■■■ 4.23
CALCOCO2-209ENST00000507076 TOP2BQ02880 1626 aa41.45■■■■■ 4.23
CALCOCO2-209ENST00000507076 GRIN2AQ12879 1464 aa41.45■■■■■ 4.23
CALCOCO2-209ENST00000507076 ERCC6L2Q5T890 1561 aa41.38■■■■■ 4.22
CALCOCO2-209ENST00000507076 CEP170Q5SW79 1584 aa41.37■■■■■ 4.21
CALCOCO2-209ENST00000507076 NUP160Q12769 1436 aa41.28■■■■■ 4.2
CALCOCO2-209ENST00000507076 FHAD1B1AJZ9 1412 aa41.23■■■■■ 4.19
CALCOCO2-209ENST00000507076 SHROOM2Q13796 1616 aa41.21■■■■■ 4.19
CALCOCO2-209ENST00000507076 ERICH3Q5RHP9 1530 aa41.19■■■■■ 4.18
CALCOCO2-209ENST00000507076 PRG4Q92954 1404 aaPredicted RBP40.92■■■■■ 4.14
CALCOCO2-209ENST00000507076 RUSC2Q8N2Y8 1516 aa40.89■■■■■ 4.14
CALCOCO2-209ENST00000507076 KIF13AQ9H1H9 1805 aa40.87■■■■■ 4.13
CALCOCO2-209ENST00000507076 JPH4Q96JJ6 628 aa40.81■■■■■ 4.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms