RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 KIF3BO15066 747 aa21.4■■□□□ 1.02
TRIM50-204ENST00000493498 TSPY4P0CV99 314 aa21.4■■□□□ 1.02
TRIM50-204ENST00000493498 TSPY10P0CW01 314 aa21.4■■□□□ 1.02
TRIM50-204ENST00000493498 PZPP20742 1482 aa21.39■■□□□ 1.01
TRIM50-204ENST00000493498 DNMT1P26358 1616 aaKnown RBP21.37■■□□□ 1.01
TRIM50-204ENST00000493498 VPS8Q8N3P4 1428 aa21.37■■□□□ 1.01
TRIM50-204ENST00000493498 TNRQ92752 1358 aa21.36■■□□□ 1.01
TRIM50-204ENST00000493498 DISP3Q9P2K9 1392 aa21.36■■□□□ 1.01
TRIM50-204ENST00000493498 WASHC2CQ9Y4E1 1318 aa21.36■■□□□ 1.01
TRIM50-204ENST00000493498 ZNF335Q9H4Z2 1342 aaPredicted RBP21.35■■□□□ 1.01
TRIM50-204ENST00000493498 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
TRIM50-204ENST00000493498 LRRC9Q6ZRR7 1453 aa21.34■■□□□ 1.01
TRIM50-204ENST00000493498 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
TRIM50-204ENST00000493498 NLRP1Q9C000 1473 aa21.32■■□□□ 1
TRIM50-204ENST00000493498 MAST1Q9Y2H9 1570 aa21.31■■□□□ 1
TRIM50-204ENST00000493498 SPATA31D1Q6ZQQ2 1576 aa21.3■■□□□ 1
TRIM50-204ENST00000493498 ZC3H13Q5T200 1668 aaKnown RBP21.3■■□□□ 1
TRIM50-204ENST00000493498 UBAP1LF5GYI3 381 aa21.29■■□□□ 1
TRIM50-204ENST00000493498 RNF17Q9BXT8 1623 aaKnown RBP21.29■■□□□ 1
TRIM50-204ENST00000493498 EIF2AK4Q9P2K8 1649 aaKnown RBP21.29■■□□□ 1
TRIM50-204ENST00000493498 MIA2Q96PC5 1412 aa21.29■■□□□ 1
TRIM50-204ENST00000493498 FBXO31Q5XUX0 539 aaPredicted RBP21.28■■□□□ 1
TRIM50-204ENST00000493498 THEMISQ8N1K5 641 aaPredicted RBP21.28■■□□□ 1
TRIM50-204ENST00000493498 CPS1P31327 1500 aa21.27■■□□□ 1
TRIM50-204ENST00000493498 ANKLE2Q86XL3 938 aa21.26■□□□□ 0.99
TRIM50-204ENST00000493498 MYOM3Q5VTT5 1437 aa21.25■□□□□ 0.99
TRIM50-204ENST00000493498 NEURL4Q96JN8 1562 aa21.24■□□□□ 0.99
TRIM50-204ENST00000493498 UGGT1Q9NYU2 1555 aa21.24■□□□□ 0.99
TRIM50-204ENST00000493498 DEPDC5O75140 1603 aa21.23■□□□□ 0.99
TRIM50-204ENST00000493498 ABCC3O15438 1527 aa21.22■□□□□ 0.99
TRIM50-204ENST00000493498 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
TRIM50-204ENST00000493498 MED14O60244 1454 aa21.2■□□□□ 0.98
TRIM50-204ENST00000493498 DUOX2Q9NRD8 1548 aa21.2■□□□□ 0.98
TRIM50-204ENST00000493498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.2■□□□□ 0.98
TRIM50-204ENST00000493498 SOCS7O14512 581 aa21.18■□□□□ 0.98
TRIM50-204ENST00000493498 TOM1O60784 492 aa21.18■□□□□ 0.98
TRIM50-204ENST00000493498 NPHP4O75161 1426 aaPredicted RBP21.18■□□□□ 0.98
TRIM50-204ENST00000493498 ILDR2Q71H61 639 aa21.17■□□□□ 0.98
TRIM50-204ENST00000493498 ERVK-7P63135 1459 aa21.16■□□□□ 0.98
TRIM50-204ENST00000493498 APLP2Q06481 763 aa21.16■□□□□ 0.98
TRIM50-204ENST00000493498 KANK4Q5T7N3 995 aaPredicted RBP21.16■□□□□ 0.98
TRIM50-204ENST00000493498 IQGAP1P46940 1657 aa21.15■□□□□ 0.98
TRIM50-204ENST00000493498 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
TRIM50-204ENST00000493498 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.97
TRIM50-204ENST00000493498 CEP152O94986 1710 aa21.13■□□□□ 0.97
TRIM50-204ENST00000493498 CROCC2H7BZ55 1655 aa21.13■□□□□ 0.97
TRIM50-204ENST00000493498 ERBINQ96RT1 1412 aa21.12■□□□□ 0.97
TRIM50-204ENST00000493498 KIF15Q9NS87 1388 aa21.11■□□□□ 0.97
TRIM50-204ENST00000493498 PRDM15P57071 1507 aaPredicted RBP21.11■□□□□ 0.97
TRIM50-204ENST00000493498 CFAP65Q6ZU64 1925 aaKnown RBP21.11■□□□□ 0.97
TRIM50-204ENST00000493498 PTPN23Q9H3S7 1636 aa21.1■□□□□ 0.97
TRIM50-204ENST00000493498 ARHGAP31Q2M1Z3 1444 aa21.1■□□□□ 0.97
TRIM50-204ENST00000493498 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
TRIM50-204ENST00000493498 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
TRIM50-204ENST00000493498 SYNMO15061 1565 aa21.07■□□□□ 0.96
TRIM50-204ENST00000493498 ABCC5O15440 1437 aa21.07■□□□□ 0.96
TRIM50-204ENST00000493498 PIP4K2BP78356 416 aa21.06■□□□□ 0.96
TRIM50-204ENST00000493498 KANK1Q14678 1352 aa21.06■□□□□ 0.96
TRIM50-204ENST00000493498 SCAF11Q99590 1463 aaKnown RBP21.05■□□□□ 0.96
TRIM50-204ENST00000493498 DAPK1P53355 1430 aa21.04■□□□□ 0.96
TRIM50-204ENST00000493498 HSPA1LP34931 641 aa21.03■□□□□ 0.96
TRIM50-204ENST00000493498 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
TRIM50-204ENST00000493498 SLIT1O75093 1534 aa21.03■□□□□ 0.96
TRIM50-204ENST00000493498 FGD6Q6ZV73 1430 aa21.03■□□□□ 0.96
TRIM50-204ENST00000493498 ANKRD30AQ9BXX3 1397 aa21.02■□□□□ 0.96
TRIM50-204ENST00000493498 ARHGAP23Q9P227 1491 aa21.01■□□□□ 0.95
TRIM50-204ENST00000493498 EID1Q9Y6B2 187 aa21.01■□□□□ 0.95
TRIM50-204ENST00000493498 KDM5AP29375 1690 aaKnown RBP21■□□□□ 0.95
TRIM50-204ENST00000493498 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
TRIM50-204ENST00000493498 STRCP1A6NGW2 1772 aa20.99■□□□□ 0.95
TRIM50-204ENST00000493498 LMTK2Q8IWU2 1503 aa20.99■□□□□ 0.95
TRIM50-204ENST00000493498 TXNDC2Q86VQ3 553 aa20.98■□□□□ 0.95
TRIM50-204ENST00000493498 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
TRIM50-204ENST00000493498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.97■□□□□ 0.95
TRIM50-204ENST00000493498 STAG3Q9UJ98 1225 aa20.96■□□□□ 0.95
TRIM50-204ENST00000493498 PIK3C2BO00750 1634 aa20.96■□□□□ 0.95
TRIM50-204ENST00000493498 ALKQ9UM73 1620 aa20.95■□□□□ 0.94
TRIM50-204ENST00000493498 TMEM2Q9UHN6 1383 aa20.94■□□□□ 0.94
TRIM50-204ENST00000493498 LTKP29376 864 aa20.93■□□□□ 0.94
TRIM50-204ENST00000493498 EFCAB6Q5THR3 1501 aa20.93■□□□□ 0.94
TRIM50-204ENST00000493498 ADGRL2O95490 1459 aa20.92■□□□□ 0.94
TRIM50-204ENST00000493498 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
TRIM50-204ENST00000493498 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
TRIM50-204ENST00000493498 NOS1P29475 1434 aa20.87■□□□□ 0.93
TRIM50-204ENST00000493498 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
TRIM50-204ENST00000493498 SLC52A1Q9NWF4 448 aa20.87■□□□□ 0.93
TRIM50-204ENST00000493498 IDI1Q13907 227 aa20.86■□□□□ 0.93
TRIM50-204ENST00000493498 ADGRB3O60242 1522 aa20.85■□□□□ 0.93
TRIM50-204ENST00000493498 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
TRIM50-204ENST00000493498 ANKRD50Q9ULJ7 1429 aa20.84■□□□□ 0.93
TRIM50-204ENST00000493498 KCNA6P17658 529 aa20.82■□□□□ 0.92
TRIM50-204ENST00000493498 FAM50AQ14320 339 aaKnown RBP20.82■□□□□ 0.92
TRIM50-204ENST00000493498 TET3O43151 1660 aa20.8■□□□□ 0.92
TRIM50-204ENST00000493498 HDGFP51858 240 aaKnown RBP20.8■□□□□ 0.92
TRIM50-204ENST00000493498 NKTRP30414 1462 aaKnown RBP20.79■□□□□ 0.92
TRIM50-204ENST00000493498 FAM135BQ49AJ0 1406 aa20.78■□□□□ 0.92
TRIM50-204ENST00000493498 GCC2Q8IWJ2 1684 aa20.77■□□□□ 0.92
TRIM50-204ENST00000493498 TMEM94Q12767 1356 aa20.77■□□□□ 0.92
TRIM50-204ENST00000493498 NWD1Q149M9 1564 aa20.76■□□□□ 0.91
TRIM50-204ENST00000493498 PROSER2Q86WR7 435 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms