RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
TRIM50-204ENST00000493498 CCDC180Q9P1Z9 1646 aa30.44■■■□□ 2.46
TRIM50-204ENST00000493498 ABCC9O60706 1549 aa30.36■■■□□ 2.45
TRIM50-204ENST00000493498 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
TRIM50-204ENST00000493498 NACADO15069 1562 aa28.79■■■□□ 2.2
TRIM50-204ENST00000493498 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
TRIM50-204ENST00000493498 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
TRIM50-204ENST00000493498 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
TRIM50-204ENST00000493498 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.12
TRIM50-204ENST00000493498 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.1
TRIM50-204ENST00000493498 BICRAQ9NZM4 1560 aa28.04■■■□□ 2.08
TRIM50-204ENST00000493498 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
TRIM50-204ENST00000493498 DCAF1Q9Y4B6 1507 aa27.98■■■□□ 2.07
TRIM50-204ENST00000493498 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
TRIM50-204ENST00000493498 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
TRIM50-204ENST00000493498 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
TRIM50-204ENST00000493498 EIF4G1Q04637 1599 aaKnown RBP27.41■■□□□ 1.98
TRIM50-204ENST00000493498 CECR2Q9BXF3 1484 aa27.41■■□□□ 1.98
TRIM50-204ENST00000493498 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
TRIM50-204ENST00000493498 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
TRIM50-204ENST00000493498 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
TRIM50-204ENST00000493498 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
TRIM50-204ENST00000493498 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
TRIM50-204ENST00000493498 CUX2O14529 1486 aa26.32■■□□□ 1.8
TRIM50-204ENST00000493498 DNAJC5Q9H3Z4 198 aa26.31■■□□□ 1.8
TRIM50-204ENST00000493498 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
TRIM50-204ENST00000493498 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
TRIM50-204ENST00000493498 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
TRIM50-204ENST00000493498 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
TRIM50-204ENST00000493498 NESP48681 1621 aa26.03■■□□□ 1.76
TRIM50-204ENST00000493498 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
TRIM50-204ENST00000493498 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
TRIM50-204ENST00000493498 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
TRIM50-204ENST00000493498 PDS5BQ9NTI5 1447 aa25.83■■□□□ 1.73
TRIM50-204ENST00000493498 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
TRIM50-204ENST00000493498 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
TRIM50-204ENST00000493498 WIZO95785 1651 aa25.67■■□□□ 1.7
TRIM50-204ENST00000493498 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
TRIM50-204ENST00000493498 WDR62O43379 1518 aa25.53■■□□□ 1.68
TRIM50-204ENST00000493498 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
TRIM50-204ENST00000493498 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
TRIM50-204ENST00000493498 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
TRIM50-204ENST00000493498 CFTRP13569 1480 aa25.4■■□□□ 1.66
TRIM50-204ENST00000493498 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
TRIM50-204ENST00000493498 PRDM2Q13029 1718 aa25.22■■□□□ 1.63
TRIM50-204ENST00000493498 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
TRIM50-204ENST00000493498 OSCARQ8IYS5 282 aa25.07■■□□□ 1.6
TRIM50-204ENST00000493498 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
TRIM50-204ENST00000493498 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
TRIM50-204ENST00000493498 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
TRIM50-204ENST00000493498 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
TRIM50-204ENST00000493498 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
TRIM50-204ENST00000493498 DNMBPQ6XZF7 1577 aa24.85■■□□□ 1.57
TRIM50-204ENST00000493498 ZNF608Q9ULD9 1512 aaPredicted RBP24.84■■□□□ 1.57
TRIM50-204ENST00000493498 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
TRIM50-204ENST00000493498 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
TRIM50-204ENST00000493498 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
TRIM50-204ENST00000493498 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
TRIM50-204ENST00000493498 TARBP1Q13395 1621 aaKnown RBP24.69■■□□□ 1.54
TRIM50-204ENST00000493498 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
TRIM50-204ENST00000493498 ARHGEF11O15085 1522 aa24.64■■□□□ 1.53
TRIM50-204ENST00000493498 AQRO60306 1485 aaKnown RBP eCLIP24.61■■□□□ 1.53
TRIM50-204ENST00000493498 CHD1O14646 1710 aa24.6■■□□□ 1.53
TRIM50-204ENST00000493498 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
TRIM50-204ENST00000493498 SOGA1O94964 1423 aa24.54■■□□□ 1.52
TRIM50-204ENST00000493498 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
TRIM50-204ENST00000493498 FBLN2P98095 1184 aa24.49■■□□□ 1.51
TRIM50-204ENST00000493498 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
TRIM50-204ENST00000493498 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
TRIM50-204ENST00000493498 CUX1P39880 1505 aa24.42■■□□□ 1.5
TRIM50-204ENST00000493498 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
TRIM50-204ENST00000493498 MAGI1Q96QZ7 1491 aaPredicted RBP24.41■■□□□ 1.5
TRIM50-204ENST00000493498 SNAPC4Q5SXM2 1469 aa24.4■■□□□ 1.5
TRIM50-204ENST00000493498 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
TRIM50-204ENST00000493498 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
TRIM50-204ENST00000493498 SYNJ1O43426 1573 aa24.36■■□□□ 1.49
TRIM50-204ENST00000493498 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
TRIM50-204ENST00000493498 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
TRIM50-204ENST00000493498 SYNJ2O15056 1496 aa24.3■■□□□ 1.48
TRIM50-204ENST00000493498 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
TRIM50-204ENST00000493498 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
TRIM50-204ENST00000493498 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
TRIM50-204ENST00000493498 TRHP20396 242 aaPredicted RBP24.2■■□□□ 1.46
TRIM50-204ENST00000493498 ABCA5Q8WWZ7 1642 aa24.2■■□□□ 1.46
TRIM50-204ENST00000493498 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
TRIM50-204ENST00000493498 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
TRIM50-204ENST00000493498 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
TRIM50-204ENST00000493498 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
TRIM50-204ENST00000493498 GRIN2AQ12879 1464 aa24.04■■□□□ 1.44
TRIM50-204ENST00000493498 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
TRIM50-204ENST00000493498 FHAD1B1AJZ9 1412 aa23.97■■□□□ 1.43
TRIM50-204ENST00000493498 ERICH3Q5RHP9 1530 aa23.96■■□□□ 1.43
TRIM50-204ENST00000493498 NUP160Q12769 1436 aa23.96■■□□□ 1.43
TRIM50-204ENST00000493498 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
TRIM50-204ENST00000493498 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
TRIM50-204ENST00000493498 ERCC6L2Q5T890 1561 aa23.83■■□□□ 1.41
TRIM50-204ENST00000493498 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
TRIM50-204ENST00000493498 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
TRIM50-204ENST00000493498 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
TRIM50-204ENST00000493498 KIF27Q86VH2 1401 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms