RNA–Protein interactions for RNA: ENST00000479499.1

LAMC1-204, Transcript of laminin subunit gamma 1, humanhuman

TSL 3

Gene LAMC1, Length 700 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1-204ENST00000479499 PKD2Q13563 968 aa19.12■□□□□ 0.65
LAMC1-204ENST00000479499 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
LAMC1-204ENST00000479499 FBXO31Q5XUX0 539 aaPredicted RBP19.1■□□□□ 0.65
LAMC1-204ENST00000479499 A2ML1A8K2U0 1454 aa19.09■□□□□ 0.65
LAMC1-204ENST00000479499 KIF3BO15066 747 aa19.09■□□□□ 0.65
LAMC1-204ENST00000479499 DNMT1P26358 1616 aaKnown RBP19.07■□□□□ 0.64
LAMC1-204ENST00000479499 TNRQ92752 1358 aa19.06■□□□□ 0.64
LAMC1-204ENST00000479499 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
LAMC1-204ENST00000479499 PZPP20742 1482 aa19.04■□□□□ 0.64
LAMC1-204ENST00000479499 ARHGEF5Q12774 1597 aa19.04■□□□□ 0.64
LAMC1-204ENST00000479499 RSPH4AQ5TD94 716 aa19.04■□□□□ 0.64
LAMC1-204ENST00000479499 FAM135AQ9P2D6 1515 aa19.03■□□□□ 0.64
LAMC1-204ENST00000479499 LRRC9Q6ZRR7 1453 aa19.02■□□□□ 0.63
LAMC1-204ENST00000479499 NEURL4Q96JN8 1562 aa19.02■□□□□ 0.63
LAMC1-204ENST00000479499 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
LAMC1-204ENST00000479499 LOC105371045A0A1W2PR82 267 aa19.01■□□□□ 0.63
LAMC1-204ENST00000479499 UBAP1LF5GYI3 381 aa19.01■□□□□ 0.63
LAMC1-204ENST00000479499 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
LAMC1-204ENST00000479499 MIA2Q96PC5 1412 aa18.99■□□□□ 0.63
LAMC1-204ENST00000479499 KANK4Q5T7N3 995 aaPredicted RBP18.98■□□□□ 0.63
LAMC1-204ENST00000479499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
LAMC1-204ENST00000479499 TSPY4P0CV99 314 aa18.97■□□□□ 0.63
LAMC1-204ENST00000479499 TSPY10P0CW01 314 aa18.97■□□□□ 0.63
LAMC1-204ENST00000479499 POLR1AO95602 1720 aaPredicted RBP18.95■□□□□ 0.62
LAMC1-204ENST00000479499 MAST1Q9Y2H9 1570 aa18.95■□□□□ 0.62
LAMC1-204ENST00000479499 RNF17Q9BXT8 1623 aaKnown RBP18.95■□□□□ 0.62
LAMC1-204ENST00000479499 NLRP1Q9C000 1473 aa18.94■□□□□ 0.62
LAMC1-204ENST00000479499 ABCC3O15438 1527 aa18.94■□□□□ 0.62
LAMC1-204ENST00000479499 SHANK2Q9UPX8 1470 aa18.93■□□□□ 0.62
LAMC1-204ENST00000479499 MROH1Q8NDA8 1641 aa18.92■□□□□ 0.62
LAMC1-204ENST00000479499 ANKLE2Q86XL3 938 aa18.92■□□□□ 0.62
LAMC1-204ENST00000479499 THEMISQ8N1K5 641 aaPredicted RBP18.92■□□□□ 0.62
LAMC1-204ENST00000479499 UGGT1Q9NYU2 1555 aa18.92■□□□□ 0.62
LAMC1-204ENST00000479499 MAP3K1Q13233 1512 aa18.91■□□□□ 0.62
LAMC1-204ENST00000479499 VWDEQ8N2E2 1590 aa18.91■□□□□ 0.62
LAMC1-204ENST00000479499 MYOM3Q5VTT5 1437 aa18.91■□□□□ 0.62
LAMC1-204ENST00000479499 MED14O60244 1454 aa18.9■□□□□ 0.62
LAMC1-204ENST00000479499 CPS1P31327 1500 aa18.9■□□□□ 0.62
LAMC1-204ENST00000479499 NPHP4O75161 1426 aaPredicted RBP18.89■□□□□ 0.61
LAMC1-204ENST00000479499 DEPDC5O75140 1603 aa18.89■□□□□ 0.61
LAMC1-204ENST00000479499 ERVK-7P63135 1459 aa18.88■□□□□ 0.61
LAMC1-204ENST00000479499 EIF2AK4Q9P2K8 1649 aaKnown RBP18.88■□□□□ 0.61
LAMC1-204ENST00000479499 ZC3H13Q5T200 1668 aaKnown RBP18.86■□□□□ 0.61
LAMC1-204ENST00000479499 HSPA1LP34931 641 aa18.85■□□□□ 0.61
LAMC1-204ENST00000479499 PIP4K2BP78356 416 aa18.85■□□□□ 0.61
LAMC1-204ENST00000479499 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
LAMC1-204ENST00000479499 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
LAMC1-204ENST00000479499 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
LAMC1-204ENST00000479499 MED1Q15648 1581 aaPredicted RBP18.83■□□□□ 0.6
LAMC1-204ENST00000479499 CEP152O94986 1710 aa18.83■□□□□ 0.6
LAMC1-204ENST00000479499 ABCC5O15440 1437 aa18.83■□□□□ 0.6
LAMC1-204ENST00000479499 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
LAMC1-204ENST00000479499 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
LAMC1-204ENST00000479499 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
LAMC1-204ENST00000479499 TOM1O60784 492 aa18.81■□□□□ 0.6
LAMC1-204ENST00000479499 STRCP1A6NGW2 1772 aa18.81■□□□□ 0.6
LAMC1-204ENST00000479499 UBR1Q8IWV7 1749 aa18.79■□□□□ 0.6
LAMC1-204ENST00000479499 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
LAMC1-204ENST00000479499 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
LAMC1-204ENST00000479499 LRRC7Q96NW7 1537 aa18.78■□□□□ 0.6
LAMC1-204ENST00000479499 ARHGAP31Q2M1Z3 1444 aa18.77■□□□□ 0.6
LAMC1-204ENST00000479499 CROCC2H7BZ55 1655 aa18.77■□□□□ 0.6
LAMC1-204ENST00000479499 LTKP29376 864 aa18.77■□□□□ 0.6
LAMC1-204ENST00000479499 PTPN23Q9H3S7 1636 aa18.77■□□□□ 0.6
LAMC1-204ENST00000479499 ARHGAP23Q9P227 1491 aa18.77■□□□□ 0.59
LAMC1-204ENST00000479499 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
LAMC1-204ENST00000479499 ERBINQ96RT1 1412 aa18.76■□□□□ 0.59
LAMC1-204ENST00000479499 DAPK1P53355 1430 aa18.75■□□□□ 0.59
LAMC1-204ENST00000479499 SCAF11Q99590 1463 aaKnown RBP18.75■□□□□ 0.59
LAMC1-204ENST00000479499 SLIT1O75093 1534 aa18.74■□□□□ 0.59
LAMC1-204ENST00000479499 FGD6Q6ZV73 1430 aa18.74■□□□□ 0.59
LAMC1-204ENST00000479499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.73■□□□□ 0.59
LAMC1-204ENST00000479499 TXNDC2Q86VQ3 553 aa18.71■□□□□ 0.59
LAMC1-204ENST00000479499 SYNMO15061 1565 aa18.71■□□□□ 0.59
LAMC1-204ENST00000479499 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
LAMC1-204ENST00000479499 PIK3C2BO00750 1634 aa18.69■□□□□ 0.58
LAMC1-204ENST00000479499 LMTK2Q8IWU2 1503 aa18.68■□□□□ 0.58
LAMC1-204ENST00000479499 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
LAMC1-204ENST00000479499 APLP2Q06481 763 aa18.67■□□□□ 0.58
LAMC1-204ENST00000479499 KANK1Q14678 1352 aa18.66■□□□□ 0.58
LAMC1-204ENST00000479499 ANKRD30AQ9BXX3 1397 aa18.66■□□□□ 0.58
LAMC1-204ENST00000479499 IDI1Q13907 227 aa18.65■□□□□ 0.58
LAMC1-204ENST00000479499 EID1Q9Y6B2 187 aa18.64■□□□□ 0.57
LAMC1-204ENST00000479499 XIRP1Q702N8 1843 aaKnown RBP18.63■□□□□ 0.57
LAMC1-204ENST00000479499 NOS1P29475 1434 aa18.63■□□□□ 0.57
LAMC1-204ENST00000479499 EFCAB6Q5THR3 1501 aa18.62■□□□□ 0.57
LAMC1-204ENST00000479499 ADGRL2O95490 1459 aa18.61■□□□□ 0.57
LAMC1-204ENST00000479499 KDM5AP29375 1690 aaKnown RBP18.6■□□□□ 0.57
LAMC1-204ENST00000479499 MSH5O43196 834 aa18.59■□□□□ 0.57
LAMC1-204ENST00000479499 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
LAMC1-204ENST00000479499 TET3O43151 1660 aa18.59■□□□□ 0.57
LAMC1-204ENST00000479499 SLC26A8Q96RN1 970 aa18.57■□□□□ 0.56
LAMC1-204ENST00000479499 ADGRB3O60242 1522 aa18.57■□□□□ 0.56
LAMC1-204ENST00000479499 TMEM94Q12767 1356 aa18.56■□□□□ 0.56
LAMC1-204ENST00000479499 KCNA6P17658 529 aa18.55■□□□□ 0.56
LAMC1-204ENST00000479499 FAM50AQ14320 339 aaKnown RBP18.55■□□□□ 0.56
LAMC1-204ENST00000479499 RBM33Q96EV2 1170 aaKnown RBP18.54■□□□□ 0.56
LAMC1-204ENST00000479499 FAM135BQ49AJ0 1406 aa18.54■□□□□ 0.56
LAMC1-204ENST00000479499 ANKRD50Q9ULJ7 1429 aa18.54■□□□□ 0.56
LAMC1-204ENST00000479499 SLC52A1Q9NWF4 448 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 195.9 ms