RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 CAMSAP2Q08AD1 1489 aa20.61■□□□□ 0.89
TDP2-204ENST00000478507 KDM5DQ9BY66 1539 aa20.59■□□□□ 0.89
TDP2-204ENST00000478507 PZPP20742 1482 aa20.58■□□□□ 0.89
TDP2-204ENST00000478507 NEURL4Q96JN8 1562 aa20.57■□□□□ 0.88
TDP2-204ENST00000478507 ARHGEF5Q12774 1597 aa20.56■□□□□ 0.88
TDP2-204ENST00000478507 POLR1AO95602 1720 aaPredicted RBP20.56■□□□□ 0.88
TDP2-204ENST00000478507 KIF3BO15066 747 aa20.55■□□□□ 0.88
TDP2-204ENST00000478507 RSPH4AQ5TD94 716 aa20.55■□□□□ 0.88
TDP2-204ENST00000478507 FBXO31Q5XUX0 539 aaPredicted RBP20.54■□□□□ 0.88
TDP2-204ENST00000478507 TNRQ92752 1358 aa20.54■□□□□ 0.88
TDP2-204ENST00000478507 SOCS7O14512 581 aa20.53■□□□□ 0.88
TDP2-204ENST00000478507 UBAP1LF5GYI3 381 aa20.5■□□□□ 0.87
TDP2-204ENST00000478507 RNF17Q9BXT8 1623 aaKnown RBP20.49■□□□□ 0.87
TDP2-204ENST00000478507 MAST1Q9Y2H9 1570 aa20.48■□□□□ 0.87
TDP2-204ENST00000478507 MIA2Q96PC5 1412 aa20.48■□□□□ 0.87
TDP2-204ENST00000478507 LRRC9Q6ZRR7 1453 aa20.48■□□□□ 0.87
TDP2-204ENST00000478507 NLRP1Q9C000 1473 aa20.48■□□□□ 0.87
TDP2-204ENST00000478507 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
TDP2-204ENST00000478507 CPS1P31327 1500 aa20.47■□□□□ 0.87
TDP2-204ENST00000478507 DEPDC5O75140 1603 aa20.45■□□□□ 0.87
TDP2-204ENST00000478507 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
TDP2-204ENST00000478507 MED14O60244 1454 aa20.45■□□□□ 0.86
TDP2-204ENST00000478507 SHANK2Q9UPX8 1470 aa20.45■□□□□ 0.86
TDP2-204ENST00000478507 VWDEQ8N2E2 1590 aa20.45■□□□□ 0.86
TDP2-204ENST00000478507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.45■□□□□ 0.86
TDP2-204ENST00000478507 ABCC3O15438 1527 aa20.44■□□□□ 0.86
TDP2-204ENST00000478507 UGGT1Q9NYU2 1555 aa20.44■□□□□ 0.86
TDP2-204ENST00000478507 ZC3H13Q5T200 1668 aaKnown RBP20.44■□□□□ 0.86
TDP2-204ENST00000478507 MROH1Q8NDA8 1641 aa20.43■□□□□ 0.86
TDP2-204ENST00000478507 EIF2AK4Q9P2K8 1649 aaKnown RBP20.43■□□□□ 0.86
TDP2-204ENST00000478507 TSPY4P0CV99 314 aa20.42■□□□□ 0.86
TDP2-204ENST00000478507 TSPY10P0CW01 314 aa20.42■□□□□ 0.86
TDP2-204ENST00000478507 MAP3K1Q13233 1512 aa20.42■□□□□ 0.86
TDP2-204ENST00000478507 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
TDP2-204ENST00000478507 THEMISQ8N1K5 641 aaPredicted RBP20.4■□□□□ 0.86
TDP2-204ENST00000478507 ALKQ9UM73 1620 aa20.39■□□□□ 0.86
TDP2-204ENST00000478507 NPHP4O75161 1426 aaPredicted RBP20.39■□□□□ 0.85
TDP2-204ENST00000478507 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
TDP2-204ENST00000478507 IQGAP1P46940 1657 aa20.38■□□□□ 0.85
TDP2-204ENST00000478507 ERVK-7P63135 1459 aa20.37■□□□□ 0.85
TDP2-204ENST00000478507 MYOM3Q5VTT5 1437 aa20.36■□□□□ 0.85
TDP2-204ENST00000478507 STRCP1A6NGW2 1772 aa20.35■□□□□ 0.85
TDP2-204ENST00000478507 CEP152O94986 1710 aa20.34■□□□□ 0.85
TDP2-204ENST00000478507 HSPA1LP34931 641 aa20.34■□□□□ 0.85
TDP2-204ENST00000478507 TOM1O60784 492 aa20.33■□□□□ 0.85
TDP2-204ENST00000478507 UBR1Q8IWV7 1749 aa20.33■□□□□ 0.84
TDP2-204ENST00000478507 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
TDP2-204ENST00000478507 MED1Q15648 1581 aaPredicted RBP20.31■□□□□ 0.84
TDP2-204ENST00000478507 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
TDP2-204ENST00000478507 PRDM15P57071 1507 aaPredicted RBP20.31■□□□□ 0.84
TDP2-204ENST00000478507 CROCC2H7BZ55 1655 aa20.3■□□□□ 0.84
TDP2-204ENST00000478507 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
TDP2-204ENST00000478507 CFAP65Q6ZU64 1925 aaKnown RBP20.29■□□□□ 0.84
TDP2-204ENST00000478507 ARHGAP31Q2M1Z3 1444 aa20.28■□□□□ 0.84
TDP2-204ENST00000478507 LRRC7Q96NW7 1537 aa20.28■□□□□ 0.84
TDP2-204ENST00000478507 SYNMO15061 1565 aa20.28■□□□□ 0.84
TDP2-204ENST00000478507 ARHGAP23Q9P227 1491 aa20.27■□□□□ 0.84
TDP2-204ENST00000478507 SLIT1O75093 1534 aa20.27■□□□□ 0.83
TDP2-204ENST00000478507 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.83
TDP2-204ENST00000478507 ABCC5O15440 1437 aa20.26■□□□□ 0.83
TDP2-204ENST00000478507 ERBINQ96RT1 1412 aa20.26■□□□□ 0.83
TDP2-204ENST00000478507 SCAF11Q99590 1463 aaKnown RBP20.25■□□□□ 0.83
TDP2-204ENST00000478507 KIF15Q9NS87 1388 aa20.25■□□□□ 0.83
TDP2-204ENST00000478507 PTPN23Q9H3S7 1636 aa20.23■□□□□ 0.83
TDP2-204ENST00000478507 LTKP29376 864 aa20.21■□□□□ 0.83
TDP2-204ENST00000478507 DAPK1P53355 1430 aa20.19■□□□□ 0.82
TDP2-204ENST00000478507 XIRP1Q702N8 1843 aaKnown RBP20.19■□□□□ 0.82
TDP2-204ENST00000478507 PIK3C2BO00750 1634 aa20.19■□□□□ 0.82
TDP2-204ENST00000478507 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
TDP2-204ENST00000478507 KDM5AP29375 1690 aaKnown RBP20.17■□□□□ 0.82
TDP2-204ENST00000478507 RRP7BPQ9NSQ0 103 aa20.17■□□□□ 0.82
TDP2-204ENST00000478507 FGD6Q6ZV73 1430 aa20.17■□□□□ 0.82
TDP2-204ENST00000478507 TXNDC2Q86VQ3 553 aa20.15■□□□□ 0.82
TDP2-204ENST00000478507 TMEM2Q9UHN6 1383 aa20.14■□□□□ 0.81
TDP2-204ENST00000478507 EFCAB6Q5THR3 1501 aa20.11■□□□□ 0.81
TDP2-204ENST00000478507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.1■□□□□ 0.811e-7■□□□□ 8.2
TDP2-204ENST00000478507 NOS1P29475 1434 aa20.1■□□□□ 0.81
TDP2-204ENST00000478507 TET3O43151 1660 aa20.1■□□□□ 0.81
TDP2-204ENST00000478507 KANK1Q14678 1352 aa20.09■□□□□ 0.81
TDP2-204ENST00000478507 ANKRD30AQ9BXX3 1397 aa20.09■□□□□ 0.81
TDP2-204ENST00000478507 EID1Q9Y6B2 187 aa20.09■□□□□ 0.81
TDP2-204ENST00000478507 ADGRL2O95490 1459 aa20.08■□□□□ 0.81
TDP2-204ENST00000478507 IDI1Q13907 227 aa20.08■□□□□ 0.81
TDP2-204ENST00000478507 ADGRB3O60242 1522 aa20.05■□□□□ 0.8
TDP2-204ENST00000478507 CHIC2Q9UKJ5 165 aa20.04■□□□□ 0.8
TDP2-204ENST00000478507 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
TDP2-204ENST00000478507 APLP2Q06481 763 aa20.03■□□□□ 0.8
TDP2-204ENST00000478507 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
TDP2-204ENST00000478507 NWD1Q149M9 1564 aa20.03■□□□□ 0.8
TDP2-204ENST00000478507 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
TDP2-204ENST00000478507 TMEM94Q12767 1356 aa20.02■□□□□ 0.8
TDP2-204ENST00000478507 RPRD2Q5VT52 1461 aaKnown RBP20.01■□□□□ 0.79
TDP2-204ENST00000478507 KCNA6P17658 529 aa20.01■□□□□ 0.79
TDP2-204ENST00000478507 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
TDP2-204ENST00000478507 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
TDP2-204ENST00000478507 NKTRP30414 1462 aaKnown RBP19.99■□□□□ 0.79
TDP2-204ENST00000478507 SLC26A8Q96RN1 970 aa19.98■□□□□ 0.79
TDP2-204ENST00000478507 SLC52A1Q9NWF4 448 aa19.98■□□□□ 0.79
TDP2-204ENST00000478507 ZFYVE9O95405 1425 aa19.98■□□□□ 0.79
TDP2-204ENST00000478507 ANKRD50Q9ULJ7 1429 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms