RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 UBAP1LF5GYI3 381 aa23.13■■□□□ 1.29
TARDBP-204ENST00000472476 KIF3BO15066 747 aa23.12■■□□□ 1.29
TARDBP-204ENST00000472476 CAMSAP2Q08AD1 1489 aa23.11■■□□□ 1.29
TARDBP-204ENST00000472476 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
TARDBP-204ENST00000472476 NEURL4Q96JN8 1562 aa23.11■■□□□ 1.29
TARDBP-204ENST00000472476 TNRQ92752 1358 aa23.09■■□□□ 1.29
TARDBP-204ENST00000472476 PZPP20742 1482 aa23.09■■□□□ 1.29
TARDBP-204ENST00000472476 POLR1AO95602 1720 aaPredicted RBP23.08■■□□□ 1.28
TARDBP-204ENST00000472476 KDM5DQ9BY66 1539 aa23.07■■□□□ 1.28
TARDBP-204ENST00000472476 RSPH4AQ5TD94 716 aa23.06■■□□□ 1.28
TARDBP-204ENST00000472476 FAM135AQ9P2D6 1515 aa23.06■■□□□ 1.28
TARDBP-204ENST00000472476 ARHGEF5Q12774 1597 aa23.05■■□□□ 1.28
TARDBP-204ENST00000472476 WASHC2CQ9Y4E1 1318 aa23.04■■□□□ 1.28
TARDBP-204ENST00000472476 MIA2Q96PC5 1412 aa23.03■■□□□ 1.28
TARDBP-204ENST00000472476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.01■■□□□ 1.271e-6■■■□□ 15.4
TARDBP-204ENST00000472476 SHANK2Q9UPX8 1470 aa23.01■■□□□ 1.27
TARDBP-204ENST00000472476 VWDEQ8N2E2 1590 aa23■■□□□ 1.27
TARDBP-204ENST00000472476 MED14O60244 1454 aa22.98■■□□□ 1.27
TARDBP-204ENST00000472476 CPS1P31327 1500 aa22.98■■□□□ 1.27
TARDBP-204ENST00000472476 ANKLE2Q86XL3 938 aa22.97■■□□□ 1.27
TARDBP-204ENST00000472476 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
TARDBP-204ENST00000472476 RNF17Q9BXT8 1623 aaKnown RBP22.97■■□□□ 1.27
TARDBP-204ENST00000472476 ALKQ9UM73 1620 aa22.97■■□□□ 1.27
TARDBP-204ENST00000472476 TSPY4P0CV99 314 aa22.96■■□□□ 1.27
TARDBP-204ENST00000472476 TSPY10P0CW01 314 aa22.96■■□□□ 1.27
TARDBP-204ENST00000472476 HSPA1LP34931 641 aa22.96■■□□□ 1.27
TARDBP-204ENST00000472476 THEMISQ8N1K5 641 aaPredicted RBP22.96■■□□□ 1.27
TARDBP-204ENST00000472476 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
TARDBP-204ENST00000472476 UGGT1Q9NYU2 1555 aa22.96■■□□□ 1.27
TARDBP-204ENST00000472476 DEPDC5O75140 1603 aa22.96■■□□□ 1.27
TARDBP-204ENST00000472476 MAST1Q9Y2H9 1570 aa22.95■■□□□ 1.26
TARDBP-204ENST00000472476 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
TARDBP-204ENST00000472476 ABCC3O15438 1527 aa22.93■■□□□ 1.26
TARDBP-204ENST00000472476 KANK4Q5T7N3 995 aaPredicted RBP22.93■■□□□ 1.26
TARDBP-204ENST00000472476 STRCP1A6NGW2 1772 aa22.93■■□□□ 1.26
TARDBP-204ENST00000472476 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
TARDBP-204ENST00000472476 PIP4K2BP78356 416 aa22.91■■□□□ 1.26
TARDBP-204ENST00000472476 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
TARDBP-204ENST00000472476 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
TARDBP-204ENST00000472476 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
TARDBP-204ENST00000472476 TOM1O60784 492 aa22.89■■□□□ 1.25
TARDBP-204ENST00000472476 IQGAP1P46940 1657 aa22.88■■□□□ 1.25
TARDBP-204ENST00000472476 ZC3H13Q5T200 1668 aaKnown RBP22.88■■□□□ 1.25
TARDBP-204ENST00000472476 EIF2AK4Q9P2K8 1649 aaKnown RBP22.88■■□□□ 1.25
TARDBP-204ENST00000472476 ERVK-7P63135 1459 aa22.87■■□□□ 1.25
TARDBP-204ENST00000472476 CEP152O94986 1710 aa22.86■■□□□ 1.25
TARDBP-204ENST00000472476 MED1Q15648 1581 aaPredicted RBP22.86■■□□□ 1.25
TARDBP-204ENST00000472476 SCAF1Q9H7N4 1312 aaKnown RBP22.85■■□□□ 1.25
TARDBP-204ENST00000472476 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
TARDBP-204ENST00000472476 UBR1Q8IWV7 1749 aa22.84■■□□□ 1.25
TARDBP-204ENST00000472476 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
TARDBP-204ENST00000472476 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
TARDBP-204ENST00000472476 DUOX2Q9NRD8 1548 aa22.79■■□□□ 1.24
TARDBP-204ENST00000472476 LTKP29376 864 aa22.78■■□□□ 1.24
TARDBP-204ENST00000472476 ARHGAP23Q9P227 1491 aa22.77■■□□□ 1.24
TARDBP-204ENST00000472476 ABCC5O15440 1437 aa22.75■■□□□ 1.23
TARDBP-204ENST00000472476 ARHGAP31Q2M1Z3 1444 aa22.75■■□□□ 1.23
TARDBP-204ENST00000472476 XIRP1Q702N8 1843 aaKnown RBP22.75■■□□□ 1.23
TARDBP-204ENST00000472476 SLIT1O75093 1534 aa22.74■■□□□ 1.23
TARDBP-204ENST00000472476 PRDM15P57071 1507 aaPredicted RBP22.74■■□□□ 1.23
TARDBP-204ENST00000472476 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
TARDBP-204ENST00000472476 SYNMO15061 1565 aa22.73■■□□□ 1.23
TARDBP-204ENST00000472476 CROCC2H7BZ55 1655 aa22.73■■□□□ 1.23
TARDBP-204ENST00000472476 KIF15Q9NS87 1388 aa22.72■■□□□ 1.23
TARDBP-204ENST00000472476 RRP7BPQ9NSQ0 103 aa22.71■■□□□ 1.23
TARDBP-204ENST00000472476 TXNDC2Q86VQ3 553 aa22.7■■□□□ 1.22
TARDBP-204ENST00000472476 ERBINQ96RT1 1412 aa22.69■■□□□ 1.22
TARDBP-204ENST00000472476 PIK3C2BO00750 1634 aa22.68■■□□□ 1.22
TARDBP-204ENST00000472476 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
TARDBP-204ENST00000472476 DAPK1P53355 1430 aa22.65■■□□□ 1.22
TARDBP-204ENST00000472476 SENP3Q9H4L4 574 aaPredicted RBP22.65■■□□□ 1.22
TARDBP-204ENST00000472476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.64■■□□□ 1.212e-9■■□□□ 13.4
TARDBP-204ENST00000472476 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
TARDBP-204ENST00000472476 IDI1Q13907 227 aa22.62■■□□□ 1.21
TARDBP-204ENST00000472476 LMTK2Q8IWU2 1503 aa22.62■■□□□ 1.21
TARDBP-204ENST00000472476 KDM5AP29375 1690 aaKnown RBP22.61■■□□□ 1.21
TARDBP-204ENST00000472476 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
TARDBP-204ENST00000472476 RGS17Q9UGC6 210 aaPredicted RBP22.6■■□□□ 1.21
TARDBP-204ENST00000472476 TET3O43151 1660 aa22.6■■□□□ 1.21
TARDBP-204ENST00000472476 EID1Q9Y6B2 187 aa22.59■■□□□ 1.21
TARDBP-204ENST00000472476 CHIC2Q9UKJ5 165 aa22.58■■□□□ 1.21
TARDBP-204ENST00000472476 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
TARDBP-204ENST00000472476 EFCAB6Q5THR3 1501 aa22.57■■□□□ 1.2
TARDBP-204ENST00000472476 NOS1P29475 1434 aa22.57■■□□□ 1.2
TARDBP-204ENST00000472476 KANK1Q14678 1352 aa22.54■■□□□ 1.2
TARDBP-204ENST00000472476 FAM135BQ49AJ0 1406 aa22.54■■□□□ 1.2
TARDBP-204ENST00000472476 TMEM94Q12767 1356 aa22.53■■□□□ 1.2
TARDBP-204ENST00000472476 ANKRD30AQ9BXX3 1397 aa22.53■■□□□ 1.2
TARDBP-204ENST00000472476 KCNA6P17658 529 aa22.53■■□□□ 1.2
TARDBP-204ENST00000472476 SLC26A8Q96RN1 970 aa22.52■■□□□ 1.2
TARDBP-204ENST00000472476 RBM33Q96EV2 1170 aaKnown RBP22.5■■□□□ 1.19
TARDBP-204ENST00000472476 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
TARDBP-204ENST00000472476 ADGRL2O95490 1459 aa22.49■■□□□ 1.19
TARDBP-204ENST00000472476 ADGRB3O60242 1522 aa22.48■■□□□ 1.19
TARDBP-204ENST00000472476 MYO5BQ9ULV0 1848 aa22.47■■□□□ 1.19
TARDBP-204ENST00000472476 APLP2Q06481 763 aa22.47■■□□□ 1.19
TARDBP-204ENST00000472476 PROSER2Q86WR7 435 aaPredicted RBP22.46■■□□□ 1.19
TARDBP-204ENST00000472476 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
TARDBP-204ENST00000472476 ROBO1Q9Y6N7 1651 aa22.46■■□□□ 1.19
TARDBP-204ENST00000472476 SLC52A1Q9NWF4 448 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms