RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 PHLDB1Q86UU1 1377 aa8.71□□□□□ -1.02
HDAC8-216ENST00000470998 TSPOAP1O95153 1857 aa8.7□□□□□ -1.02
HDAC8-216ENST00000470998 PPRC1Q5VV67 1664 aaKnown RBP8.7□□□□□ -1.02
HDAC8-216ENST00000470998 P3H3Q8IVL6 736 aa8.7□□□□□ -1.02
HDAC8-216ENST00000470998 HS6ST3Q8IZP7 471 aa8.7□□□□□ -1.02
HDAC8-216ENST00000470998 VPS8Q8N3P4 1428 aa8.7□□□□□ -1.02
HDAC8-216ENST00000470998 ATP10BO94823 1461 aa8.7□□□□□ -1.02
HDAC8-216ENST00000470998 SAMD9Q5K651 1589 aa8.69□□□□□ -1.02
HDAC8-216ENST00000470998 KDM4FA0A1W2PPD8 638 aa8.69□□□□□ -1.02
HDAC8-216ENST00000470998 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
HDAC8-216ENST00000470998 COL17A1Q9UMD9 1497 aaPredicted RBP8.69□□□□□ -1.02
HDAC8-216ENST00000470998 EFCAB3Q8N7B9 438 aa8.68□□□□□ -1.02
HDAC8-216ENST00000470998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.68□□□□□ -1.02
HDAC8-216ENST00000470998 CFAP43Q8NDM7 1665 aa8.67□□□□□ -1.02
HDAC8-216ENST00000470998 EFCAB5A4FU69 1503 aa8.66□□□□□ -1.02
HDAC8-216ENST00000470998 PLEKHD1A6NEE1 506 aa8.65□□□□□ -1.02
HDAC8-216ENST00000470998 SOX12O15370 315 aa8.65□□□□□ -1.02
HDAC8-216ENST00000470998 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.03
HDAC8-216ENST00000470998 ARAP3Q8WWN8 1544 aa8.64□□□□□ -1.03
HDAC8-216ENST00000470998 FHOD3Q2V2M9 1422 aa8.64□□□□□ -1.03
HDAC8-216ENST00000470998 G3V3G9 751 aa8.64□□□□□ -1.03
HDAC8-216ENST00000470998 OCEL1Q9H607 264 aa8.64□□□□□ -1.03
HDAC8-216ENST00000470998 NUP153P49790 1475 aaKnown RBP8.64□□□□□ -1.03
HDAC8-216ENST00000470998 ARID3CA6NKF2 412 aa8.63□□□□□ -1.03
HDAC8-216ENST00000470998 NEO1Q92859 1461 aa8.63□□□□□ -1.03
HDAC8-216ENST00000470998 NLRP6P59044 892 aa8.62□□□□□ -1.03
HDAC8-216ENST00000470998 IRX5P78411 483 aaPredicted RBP8.62□□□□□ -1.03
HDAC8-216ENST00000470998 ADGRL1O94910 1474 aa8.62□□□□□ -1.03
HDAC8-216ENST00000470998 ABCA9Q8IUA7 1624 aa8.62□□□□□ -1.03
HDAC8-216ENST00000470998 RANGAP1P46060 587 aaPredicted RBP8.61□□□□□ -1.03
HDAC8-216ENST00000470998 RYDENQ9NUL5 291 aaKnown RBP8.61□□□□□ -1.03
HDAC8-216ENST00000470998 FMN1Q68DA7 1419 aa8.61□□□□□ -1.03
HDAC8-216ENST00000470998 COLQQ9Y215 455 aaPredicted RBP8.6□□□□□ -1.03
HDAC8-216ENST00000470998 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
HDAC8-216ENST00000470998 PHF8Q9UPP1 1060 aa8.59□□□□□ -1.03
HDAC8-216ENST00000470998 CDK11AQ9UQ88 783 aaPredicted RBP8.59□□□□□ -1.03
HDAC8-216ENST00000470998 MAP3K1Q13233 1512 aa8.59□□□□□ -1.03
HDAC8-216ENST00000470998 LHX8Q68G74 356 aa8.58□□□□□ -1.04
HDAC8-216ENST00000470998 L3MBTL3Q96JM7 780 aaPredicted RBP8.58□□□□□ -1.04
HDAC8-216ENST00000470998 DENND4BO75064 1496 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-216ENST00000470998 MAMSTRQ6ZN01 415 aa8.56□□□□□ -1.04
HDAC8-216ENST00000470998 PDCD7Q8N8D1 485 aaKnown RBP8.56□□□□□ -1.04
HDAC8-216ENST00000470998 ARHGAP35Q9NRY4 1499 aa8.56□□□□□ -1.04
HDAC8-216ENST00000470998 AKNAQ7Z591 1439 aa8.55□□□□□ -1.04
HDAC8-216ENST00000470998 POTEFA5A3E0 1075 aa8.55□□□□□ -1.04
HDAC8-216ENST00000470998 RAPGEF3O95398 923 aa8.55□□□□□ -1.04
HDAC8-216ENST00000470998 BBXQ8WY36 941 aaPredicted RBP8.55□□□□□ -1.04
HDAC8-216ENST00000470998 MFRPQ9BY79 579 aa8.55□□□□□ -1.04
HDAC8-216ENST00000470998 SCUBE2Q9NQ36 999 aa8.55□□□□□ -1.04
HDAC8-216ENST00000470998 FANCAO15360 1455 aa8.55□□□□□ -1.04
HDAC8-216ENST00000470998 PLCH2O75038 1416 aa8.54□□□□□ -1.04
HDAC8-216ENST00000470998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC8-216ENST00000470998 CFAP74Q9C0B2 1584 aa8.54□□□□□ -1.04
HDAC8-216ENST00000470998 C3orf67Q6ZVT6 689 aa8.54□□□□□ -1.04
HDAC8-216ENST00000470998 HECW1Q76N89 1606 aa8.54□□□□□ -1.04
HDAC8-216ENST00000470998 ATP1B4Q9UN42 357 aaPredicted RBP8.53□□□□□ -1.04
HDAC8-216ENST00000470998 MAGI2Q86UL8 1455 aa8.52□□□□□ -1.05
HDAC8-216ENST00000470998 EFCAB2Q5VUJ9 269 aa8.52□□□□□ -1.05
HDAC8-216ENST00000470998 CDK13Q14004 1512 aaKnown RBP8.52□□□□□ -1.05
HDAC8-216ENST00000470998 TROQ12816 1431 aaPredicted RBP8.52□□□□□ -1.05
HDAC8-216ENST00000470998 ILDR1Q86SU0 546 aaPredicted RBP8.51□□□□□ -1.05
HDAC8-216ENST00000470998 FBXO22Q8NEZ5 403 aa8.51□□□□□ -1.05
HDAC8-216ENST00000470998 BOLA1Q9Y3E2 137 aa8.51□□□□□ -1.05
HDAC8-216ENST00000470998 ARID4BQ4LE39 1312 aaPredicted RBP8.51□□□□□ -1.05
HDAC8-216ENST00000470998 NKX1-1Q15270 411 aaPredicted RBP8.5□□□□□ -1.05
HDAC8-216ENST00000470998 FRMPD1Q5SYB0 1578 aa8.5□□□□□ -1.05
HDAC8-216ENST00000470998 DPY19L2Q6NUT2 758 aa8.5□□□□□ -1.05
HDAC8-216ENST00000470998 POGZQ7Z3K3 1410 aa8.5□□□□□ -1.05
HDAC8-216ENST00000470998 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
HDAC8-216ENST00000470998 MS4A4AQ96JQ5 239 aa8.5□□□□□ -1.05
HDAC8-216ENST00000470998 CCDC18Q5T9S5 1454 aa8.5□□□□□ -1.05
HDAC8-216ENST00000470998 ZMYM4Q5VZL5 1548 aa8.49□□□□□ -1.05
HDAC8-216ENST00000470998 TTC37Q6PGP7 1564 aa8.49□□□□□ -1.05
HDAC8-216ENST00000470998 SCAPERQ9BY12 1400 aa8.49□□□□□ -1.05
HDAC8-216ENST00000470998 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
HDAC8-216ENST00000470998 FYCO1Q9BQS8 1478 aa8.49□□□□□ -1.05
HDAC8-216ENST00000470998 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
HDAC8-216ENST00000470998 POTEB2H3BUK9 544 aa8.48□□□□□ -1.05
HDAC8-216ENST00000470998 PTPRMP28827 1452 aa8.48□□□□□ -1.05
HDAC8-216ENST00000470998 ARHGEF40Q8TER5 1519 aa8.48□□□□□ -1.05
HDAC8-216ENST00000470998 ADAMTSL3P82987 1691 aa8.47□□□□□ -1.05
HDAC8-216ENST00000470998 SPRYD3Q8NCJ5 442 aa8.47□□□□□ -1.05
HDAC8-216ENST00000470998 CFAP44Q96MT7 982 aa8.47□□□□□ -1.05
HDAC8-216ENST00000470998 ZFYVE16Q7Z3T8 1539 aa8.47□□□□□ -1.05
HDAC8-216ENST00000470998 CLSPNQ9HAW4 1339 aa8.47□□□□□ -1.05
HDAC8-216ENST00000470998 KIF14Q15058 1648 aa8.47□□□□□ -1.05
HDAC8-216ENST00000470998 RICTORQ6R327 1708 aa8.46□□□□□ -1.05
HDAC8-216ENST00000470998 MICALL2Q8IY33 904 aa8.46□□□□□ -1.06
HDAC8-216ENST00000470998 HECW2Q9P2P5 1572 aa8.46□□□□□ -1.06
HDAC8-216ENST00000470998 ZNF518AQ6AHZ1 1483 aa8.45□□□□□ -1.06
HDAC8-216ENST00000470998 PAXIP1Q6ZW49 1069 aaPredicted RBP8.45□□□□□ -1.06
HDAC8-216ENST00000470998 BCORL1Q5H9F3 1711 aa8.45□□□□□ -1.06
HDAC8-216ENST00000470998 C9orf84Q5VXU9 1444 aa8.45□□□□□ -1.06
HDAC8-216ENST00000470998 YEATS2Q9ULM3 1422 aa8.45□□□□□ -1.06
HDAC8-216ENST00000470998 ATP10AO60312 1499 aa8.45□□□□□ -1.06
HDAC8-216ENST00000470998 TIAM1Q13009 1591 aa8.44□□□□□ -1.06
HDAC8-216ENST00000470998 GTPBP6O43824 516 aaPredicted RBP8.44□□□□□ -1.06
HDAC8-216ENST00000470998 CCER1Q8TC90 406 aaPredicted RBP8.44□□□□□ -1.06
HDAC8-216ENST00000470998 ARHGAP5Q13017 1502 aa8.44□□□□□ -1.06
HDAC8-216ENST00000470998 SLAIN1Q8ND83 568 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms