RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 KRTAP10-10P60014 251 aa2.56□□□□□ -2
HDAC8-216ENST00000470998 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
HDAC8-216ENST00000470998 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
HDAC8-216ENST00000470998 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
HDAC8-216ENST00000470998 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
HDAC8-216ENST00000470998 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
HDAC8-216ENST00000470998 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
HDAC8-216ENST00000470998 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
HDAC8-216ENST00000470998 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
HDAC8-216ENST00000470998 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
HDAC8-216ENST00000470998 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
HDAC8-216ENST00000470998 TNP1P09430 55 aa2.45□□□□□ -2.02
HDAC8-216ENST00000470998 KRTAP19-8Q3LI54 63 aa2.42□□□□□ -2.02
HDAC8-216ENST00000470998 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
HDAC8-216ENST00000470998 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
HDAC8-216ENST00000470998 NEBP20929 6669 aa2.38□□□□□ -2.03
HDAC8-216ENST00000470998 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
HDAC8-216ENST00000470998 MT1BP07438 61 aa2.35□□□□□ -2.03
HDAC8-216ENST00000470998 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
HDAC8-216ENST00000470998 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
HDAC8-216ENST00000470998 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
HDAC8-216ENST00000470998 MT1XP80297 61 aa2.28□□□□□ -2.04
HDAC8-216ENST00000470998 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
HDAC8-216ENST00000470998 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
HDAC8-216ENST00000470998 KRTAP8-1Q8IUC2 63 aa2.27□□□□□ -2.05
HDAC8-216ENST00000470998 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
HDAC8-216ENST00000470998 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
HDAC8-216ENST00000470998 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
HDAC8-216ENST00000470998 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
HDAC8-216ENST00000470998 KMT2DO14686 5537 aa2.23□□□□□ -2.05
HDAC8-216ENST00000470998 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
HDAC8-216ENST00000470998 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
HDAC8-216ENST00000470998 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
HDAC8-216ENST00000470998 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
HDAC8-216ENST00000470998 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
HDAC8-216ENST00000470998 SPRR2EP22531 72 aa2.16□□□□□ -2.06
HDAC8-216ENST00000470998 SPRR2BP35325 72 aa2.16□□□□□ -2.06
HDAC8-216ENST00000470998 SPRR2AP35326 72 aa2.16□□□□□ -2.06
HDAC8-216ENST00000470998 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
HDAC8-216ENST00000470998 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
HDAC8-216ENST00000470998 SPRR2DP22532 72 aa2.09□□□□□ -2.07
HDAC8-216ENST00000470998 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
HDAC8-216ENST00000470998 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
HDAC8-216ENST00000470998 KRTAP19-7Q3SYF9 63 aa2.02□□□□□ -2.09
HDAC8-216ENST00000470998 MT1EP04732 61 aa2□□□□□ -2.09
HDAC8-216ENST00000470998 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
HDAC8-216ENST00000470998 MT1LQ93083 61 aa1.98□□□□□ -2.09
HDAC8-216ENST00000470998 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
HDAC8-216ENST00000470998 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
HDAC8-216ENST00000470998 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
HDAC8-216ENST00000470998 INE1O15225 51 aa1.94□□□□□ -2.1
HDAC8-216ENST00000470998 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
HDAC8-216ENST00000470998 MT1GP13640 62 aa1.93□□□□□ -2.1
HDAC8-216ENST00000470998 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
HDAC8-216ENST00000470998 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
HDAC8-216ENST00000470998 MT1MQ8N339 61 aa1.87□□□□□ -2.11
HDAC8-216ENST00000470998 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
HDAC8-216ENST00000470998 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
HDAC8-216ENST00000470998 MT4P47944 62 aa1.81□□□□□ -2.12
HDAC8-216ENST00000470998 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
HDAC8-216ENST00000470998 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
HDAC8-216ENST00000470998 MT1AP04731 61 aa1.71□□□□□ -2.14
HDAC8-216ENST00000470998 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
HDAC8-216ENST00000470998 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
HDAC8-216ENST00000470998 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
HDAC8-216ENST00000470998 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
HDAC8-216ENST00000470998 KRTAP6-1Q3LI64 71 aa1.63□□□□□ -2.15
HDAC8-216ENST00000470998 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
HDAC8-216ENST00000470998 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
HDAC8-216ENST00000470998 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
HDAC8-216ENST00000470998 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
HDAC8-216ENST00000470998 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
HDAC8-216ENST00000470998 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
HDAC8-216ENST00000470998 PRM1P04553 51 aa1.37□□□□□ -2.19
HDAC8-216ENST00000470998 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
HDAC8-216ENST00000470998 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
HDAC8-216ENST00000470998 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
HDAC8-216ENST00000470998 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 14 ms