RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 CCDC141Q6ZP82 1450 aa17.44■□□□□ 0.38
GAPDH-207ENST00000466588 KDM5DQ9BY66 1539 aa17.44■□□□□ 0.38
GAPDH-207ENST00000466588 PZPP20742 1482 aa17.43■□□□□ 0.38
GAPDH-207ENST00000466588 CAMSAP2Q08AD1 1489 aa17.43■□□□□ 0.38
GAPDH-207ENST00000466588 UBAP1LF5GYI3 381 aa17.42■□□□□ 0.38
GAPDH-207ENST00000466588 NEURL4Q96JN8 1562 aa17.42■□□□□ 0.38
GAPDH-207ENST00000466588 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
GAPDH-207ENST00000466588 TNRQ92752 1358 aa17.4■□□□□ 0.38
GAPDH-207ENST00000466588 SENP3Q9H4L4 574 aaPredicted RBP17.4■□□□□ 0.38
GAPDH-207ENST00000466588 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.38
GAPDH-207ENST00000466588 KIF3BO15066 747 aa17.38■□□□□ 0.37
GAPDH-207ENST00000466588 ARHGEF5Q12774 1597 aa17.37■□□□□ 0.37
GAPDH-207ENST00000466588 FBXO31Q5XUX0 539 aaPredicted RBP17.37■□□□□ 0.37
GAPDH-207ENST00000466588 CPS1P31327 1500 aa17.37■□□□□ 0.37
GAPDH-207ENST00000466588 RSPH4AQ5TD94 716 aa17.35■□□□□ 0.37
GAPDH-207ENST00000466588 NLRP1Q9C000 1473 aa17.35■□□□□ 0.37
GAPDH-207ENST00000466588 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
GAPDH-207ENST00000466588 WASHC2CQ9Y4E1 1318 aa17.34■□□□□ 0.37
GAPDH-207ENST00000466588 MIA2Q96PC5 1412 aa17.33■□□□□ 0.37
GAPDH-207ENST00000466588 VWDEQ8N2E2 1590 aa17.33■□□□□ 0.36
GAPDH-207ENST00000466588 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
GAPDH-207ENST00000466588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.32■□□□□ 0.36
GAPDH-207ENST00000466588 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
GAPDH-207ENST00000466588 MED14O60244 1454 aa17.31■□□□□ 0.36
GAPDH-207ENST00000466588 DEPDC5O75140 1603 aa17.31■□□□□ 0.36
GAPDH-207ENST00000466588 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
GAPDH-207ENST00000466588 ABCC3O15438 1527 aa17.3■□□□□ 0.36
GAPDH-207ENST00000466588 ZC3H13Q5T200 1668 aaKnown RBP17.29■□□□□ 0.36
GAPDH-207ENST00000466588 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
GAPDH-207ENST00000466588 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-207ENST00000466588 NPHP4O75161 1426 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-207ENST00000466588 LRRC9Q6ZRR7 1453 aa17.28■□□□□ 0.36
GAPDH-207ENST00000466588 EIF2AK4Q9P2K8 1649 aaKnown RBP17.27■□□□□ 0.36
GAPDH-207ENST00000466588 TSPY4P0CV99 314 aa17.27■□□□□ 0.35
GAPDH-207ENST00000466588 TSPY10P0CW01 314 aa17.27■□□□□ 0.35
GAPDH-207ENST00000466588 HSPA1LP34931 641 aa17.27■□□□□ 0.35
GAPDH-207ENST00000466588 MED1Q15648 1581 aaPredicted RBP17.26■□□□□ 0.35
GAPDH-207ENST00000466588 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
GAPDH-207ENST00000466588 ALKQ9UM73 1620 aa17.26■□□□□ 0.35
GAPDH-207ENST00000466588 TOM1O60784 492 aa17.26■□□□□ 0.35
GAPDH-207ENST00000466588 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
GAPDH-207ENST00000466588 ERVK-7P63135 1459 aa17.25■□□□□ 0.35
GAPDH-207ENST00000466588 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
GAPDH-207ENST00000466588 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
GAPDH-207ENST00000466588 PIP4K2BP78356 416 aa17.25■□□□□ 0.35
GAPDH-207ENST00000466588 SYNMO15061 1565 aa17.21■□□□□ 0.35
GAPDH-207ENST00000466588 APLP2Q06481 763 aa17.21■□□□□ 0.35
GAPDH-207ENST00000466588 MAP3K1Q13233 1512 aa17.2■□□□□ 0.34
GAPDH-207ENST00000466588 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
GAPDH-207ENST00000466588 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
GAPDH-207ENST00000466588 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
GAPDH-207ENST00000466588 DUOX2Q9NRD8 1548 aa17.18■□□□□ 0.34
GAPDH-207ENST00000466588 CEP152O94986 1710 aa17.18■□□□□ 0.34
GAPDH-207ENST00000466588 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
GAPDH-207ENST00000466588 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
GAPDH-207ENST00000466588 PRDM15P57071 1507 aaPredicted RBP17.17■□□□□ 0.34
GAPDH-207ENST00000466588 KANK4Q5T7N3 995 aaPredicted RBP17.15■□□□□ 0.34
GAPDH-207ENST00000466588 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
GAPDH-207ENST00000466588 ARHGAP23Q9P227 1491 aa17.15■□□□□ 0.34
GAPDH-207ENST00000466588 SLIT1O75093 1534 aa17.15■□□□□ 0.34
GAPDH-207ENST00000466588 ARHGAP31Q2M1Z3 1444 aa17.14■□□□□ 0.33
GAPDH-207ENST00000466588 ERBINQ96RT1 1412 aa17.13■□□□□ 0.33
GAPDH-207ENST00000466588 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
GAPDH-207ENST00000466588 KIF15Q9NS87 1388 aa17.12■□□□□ 0.33
GAPDH-207ENST00000466588 ABCC5O15440 1437 aa17.1■□□□□ 0.33
GAPDH-207ENST00000466588 LTKP29376 864 aa17.09■□□□□ 0.33
GAPDH-207ENST00000466588 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
GAPDH-207ENST00000466588 PTPN23Q9H3S7 1636 aa17.07■□□□□ 0.32
GAPDH-207ENST00000466588 DAPK1P53355 1430 aa17.06■□□□□ 0.32
GAPDH-207ENST00000466588 TXNDC2Q86VQ3 553 aa17.05■□□□□ 0.32
GAPDH-207ENST00000466588 TMEM2Q9UHN6 1383 aa17.05■□□□□ 0.32
GAPDH-207ENST00000466588 LMTK2Q8IWU2 1503 aa17.05■□□□□ 0.32
GAPDH-207ENST00000466588 KDM5AP29375 1690 aaKnown RBP17.04■□□□□ 0.32
GAPDH-207ENST00000466588 RRP7BPQ9NSQ0 103 aa17.03■□□□□ 0.32
GAPDH-207ENST00000466588 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
GAPDH-207ENST00000466588 EFCAB6Q5THR3 1501 aa17.02■□□□□ 0.32
GAPDH-207ENST00000466588 EID1Q9Y6B2 187 aa17.02■□□□□ 0.32
GAPDH-207ENST00000466588 FGD6Q6ZV73 1430 aa17.02■□□□□ 0.31
GAPDH-207ENST00000466588 KANK1Q14678 1352 aa17.02■□□□□ 0.31
GAPDH-207ENST00000466588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
GAPDH-207ENST00000466588 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
GAPDH-207ENST00000466588 NOS1P29475 1434 aa16.98■□□□□ 0.31
GAPDH-207ENST00000466588 FAM135BQ49AJ0 1406 aa16.98■□□□□ 0.31
GAPDH-207ENST00000466588 ANKRD30AQ9BXX3 1397 aa16.98■□□□□ 0.31
GAPDH-207ENST00000466588 PPARGC1BQ86YN6 1023 aaKnown RBP16.98■□□□□ 0.31
GAPDH-207ENST00000466588 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
GAPDH-207ENST00000466588 TET3O43151 1660 aa16.98■□□□□ 0.31
GAPDH-207ENST00000466588 TMEM94Q12767 1356 aa16.97■□□□□ 0.31
GAPDH-207ENST00000466588 IDI1Q13907 227 aa16.96■□□□□ 0.31
GAPDH-207ENST00000466588 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
GAPDH-207ENST00000466588 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
GAPDH-207ENST00000466588 ADGRL2O95490 1459 aa16.95■□□□□ 0.3
GAPDH-207ENST00000466588 RGS17Q9UGC6 210 aaPredicted RBP16.95■□□□□ 0.3
GAPDH-207ENST00000466588 NKTRP30414 1462 aaKnown RBP16.94■□□□□ 0.3
GAPDH-207ENST00000466588 KCNA6P17658 529 aa16.94■□□□□ 0.3
GAPDH-207ENST00000466588 CHIC2Q9UKJ5 165 aa16.93■□□□□ 0.3
GAPDH-207ENST00000466588 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
GAPDH-207ENST00000466588 SLC26A8Q96RN1 970 aa16.91■□□□□ 0.3
GAPDH-207ENST00000466588 RPRD2Q5VT52 1461 aaKnown RBP16.91■□□□□ 0.3
GAPDH-207ENST00000466588 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms