RNA–Protein interactions for RNA: ENST00000465423.5

PCCB-206, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-206ENST00000465423 LRRC9Q6ZRR7 1453 aa22.53■■□□□ 1.2
PCCB-206ENST00000465423 A2ML1A8K2U0 1454 aa22.51■■□□□ 1.19
PCCB-206ENST00000465423 DNMT1P26358 1616 aaKnown RBP22.5■■□□□ 1.19
PCCB-206ENST00000465423 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
PCCB-206ENST00000465423 RSPH4AQ5TD94 716 aa22.46■■□□□ 1.19
PCCB-206ENST00000465423 UBAP1LF5GYI3 381 aa22.45■■□□□ 1.18
PCCB-206ENST00000465423 FBXO31Q5XUX0 539 aaPredicted RBP22.45■■□□□ 1.18
PCCB-206ENST00000465423 CCDC141Q6ZP82 1450 aa22.45■■□□□ 1.18
PCCB-206ENST00000465423 FAM135AQ9P2D6 1515 aa22.45■■□□□ 1.18
PCCB-206ENST00000465423 KIF3BO15066 747 aa22.44■■□□□ 1.18
PCCB-206ENST00000465423 NCOA2Q15596 1464 aa22.44■■□□□ 1.18
PCCB-206ENST00000465423 PZPP20742 1482 aa22.43■■□□□ 1.18
PCCB-206ENST00000465423 CAMSAP2Q08AD1 1489 aa22.43■■□□□ 1.18
PCCB-206ENST00000465423 TNRQ92752 1358 aa22.42■■□□□ 1.18
PCCB-206ENST00000465423 KDM5DQ9BY66 1539 aa22.41■■□□□ 1.18
PCCB-206ENST00000465423 NEURL4Q96JN8 1562 aa22.41■■□□□ 1.18
PCCB-206ENST00000465423 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
PCCB-206ENST00000465423 ARHGEF5Q12774 1597 aa22.39■■□□□ 1.18
PCCB-206ENST00000465423 WASHC2CQ9Y4E1 1318 aa22.38■■□□□ 1.17
PCCB-206ENST00000465423 MIA2Q96PC5 1412 aa22.37■■□□□ 1.17
PCCB-206ENST00000465423 SHANK2Q9UPX8 1470 aa22.34■■□□□ 1.17
PCCB-206ENST00000465423 CPS1P31327 1500 aa22.34■■□□□ 1.17
PCCB-206ENST00000465423 NLRP1Q9C000 1473 aa22.34■■□□□ 1.17
PCCB-206ENST00000465423 TSPY4P0CV99 314 aa22.33■■□□□ 1.17
PCCB-206ENST00000465423 TSPY10P0CW01 314 aa22.33■■□□□ 1.17
PCCB-206ENST00000465423 ANKLE2Q86XL3 938 aa22.33■■□□□ 1.17
PCCB-206ENST00000465423 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
PCCB-206ENST00000465423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.33■■□□□ 1.17
PCCB-206ENST00000465423 MED14O60244 1454 aa22.32■■□□□ 1.16
PCCB-206ENST00000465423 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
PCCB-206ENST00000465423 VWDEQ8N2E2 1590 aa22.3■■□□□ 1.16
PCCB-206ENST00000465423 DEPDC5O75140 1603 aa22.3■■□□□ 1.16
PCCB-206ENST00000465423 RNF17Q9BXT8 1623 aaKnown RBP22.3■■□□□ 1.16
PCCB-206ENST00000465423 UGGT1Q9NYU2 1555 aa22.29■■□□□ 1.16
PCCB-206ENST00000465423 MAST1Q9Y2H9 1570 aa22.29■■□□□ 1.16
PCCB-206ENST00000465423 TOM1O60784 492 aa22.27■■□□□ 1.16
PCCB-206ENST00000465423 HSPA1LP34931 641 aa22.26■■□□□ 1.15
PCCB-206ENST00000465423 ABCC3O15438 1527 aa22.26■■□□□ 1.15
PCCB-206ENST00000465423 NPHP4O75161 1426 aaPredicted RBP22.25■■□□□ 1.15
PCCB-206ENST00000465423 MYOM3Q5VTT5 1437 aa22.25■■□□□ 1.15
PCCB-206ENST00000465423 ZC3H13Q5T200 1668 aaKnown RBP22.24■■□□□ 1.15
PCCB-206ENST00000465423 PIP4K2BP78356 416 aa22.23■■□□□ 1.15
PCCB-206ENST00000465423 EIF2AK4Q9P2K8 1649 aaKnown RBP22.23■■□□□ 1.15
PCCB-206ENST00000465423 ALKQ9UM73 1620 aa22.23■■□□□ 1.15
PCCB-206ENST00000465423 MROH1Q8NDA8 1641 aa22.22■■□□□ 1.15
PCCB-206ENST00000465423 IQGAP1P46940 1657 aa22.21■■□□□ 1.15
PCCB-206ENST00000465423 ERVK-7P63135 1459 aa22.2■■□□□ 1.14
PCCB-206ENST00000465423 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
PCCB-206ENST00000465423 STRCP1A6NGW2 1772 aa22.19■■□□□ 1.14
PCCB-206ENST00000465423 MED1Q15648 1581 aaPredicted RBP22.17■■□□□ 1.14
PCCB-206ENST00000465423 FGD6Q6ZV73 1430 aa22.17■■□□□ 1.14
PCCB-206ENST00000465423 CFAP65Q6ZU64 1925 aaKnown RBP22.17■■□□□ 1.14
PCCB-206ENST00000465423 LRRC7Q96NW7 1537 aa22.15■■□□□ 1.14
PCCB-206ENST00000465423 CEP152O94986 1710 aa22.14■■□□□ 1.14
PCCB-206ENST00000465423 UBR1Q8IWV7 1749 aa22.14■■□□□ 1.14
PCCB-206ENST00000465423 DUOX2Q9NRD8 1548 aa22.14■■□□□ 1.13
PCCB-206ENST00000465423 ARHGAP31Q2M1Z3 1444 aa22.12■■□□□ 1.13
PCCB-206ENST00000465423 PTPN23Q9H3S7 1636 aa22.11■■□□□ 1.13
PCCB-206ENST00000465423 RRBP1Q9P2E9 1410 aaKnown RBP22.11■■□□□ 1.13
PCCB-206ENST00000465423 ARHGAP23Q9P227 1491 aa22.1■■□□□ 1.13
PCCB-206ENST00000465423 SYNMO15061 1565 aa22.09■■□□□ 1.13
PCCB-206ENST00000465423 LTKP29376 864 aa22.09■■□□□ 1.13
PCCB-206ENST00000465423 SLIT1O75093 1534 aa22.09■■□□□ 1.13
PCCB-206ENST00000465423 PRDM15P57071 1507 aaPredicted RBP22.08■■□□□ 1.13
PCCB-206ENST00000465423 SCAF11Q99590 1463 aaKnown RBP22.08■■□□□ 1.12
PCCB-206ENST00000465423 ABCC5O15440 1437 aa22.06■■□□□ 1.12
PCCB-206ENST00000465423 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
PCCB-206ENST00000465423 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
PCCB-206ENST00000465423 CROCC2H7BZ55 1655 aa22.04■■□□□ 1.12
PCCB-206ENST00000465423 TXNDC2Q86VQ3 553 aa22.04■■□□□ 1.12
PCCB-206ENST00000465423 XIRP1Q702N8 1843 aaKnown RBP22.02■■□□□ 1.12
PCCB-206ENST00000465423 FAM50AQ14320 339 aaKnown RBP22.02■■□□□ 1.12
PCCB-206ENST00000465423 RRP7BPQ9NSQ0 103 aa22.02■■□□□ 1.12
PCCB-206ENST00000465423 PIK3C2BO00750 1634 aa21.99■■□□□ 1.11
PCCB-206ENST00000465423 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
PCCB-206ENST00000465423 DAPK1P53355 1430 aa21.98■■□□□ 1.11
PCCB-206ENST00000465423 EID1Q9Y6B2 187 aa21.98■■□□□ 1.11
PCCB-206ENST00000465423 KDM5AP29375 1690 aaKnown RBP21.98■■□□□ 1.11
PCCB-206ENST00000465423 LMTK2Q8IWU2 1503 aa21.97■■□□□ 1.11
PCCB-206ENST00000465423 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
PCCB-206ENST00000465423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.11
PCCB-206ENST00000465423 IDI1Q13907 227 aa21.94■■□□□ 1.1
PCCB-206ENST00000465423 KANK1Q14678 1352 aa21.94■■□□□ 1.1
PCCB-206ENST00000465423 TET3O43151 1660 aa21.92■■□□□ 1.1
PCCB-206ENST00000465423 EFCAB6Q5THR3 1501 aa21.91■■□□□ 1.1
PCCB-206ENST00000465423 ANKRD30AQ9BXX3 1397 aa21.91■■□□□ 1.1
PCCB-206ENST00000465423 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
PCCB-206ENST00000465423 FAM135BQ49AJ0 1406 aa21.9■■□□□ 1.1
PCCB-206ENST00000465423 NOS1P29475 1434 aa21.89■■□□□ 1.1
PCCB-206ENST00000465423 KCNA6P17658 529 aa21.89■■□□□ 1.09
PCCB-206ENST00000465423 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
PCCB-206ENST00000465423 RGS17Q9UGC6 210 aaPredicted RBP21.89■■□□□ 1.09
PCCB-206ENST00000465423 STAG3Q9UJ98 1225 aa21.88■■□□□ 1.09
PCCB-206ENST00000465423 CHIC2Q9UKJ5 165 aa21.88■■□□□ 1.09
PCCB-206ENST00000465423 TMEM94Q12767 1356 aa21.87■■□□□ 1.09
PCCB-206ENST00000465423 ADGRL2O95490 1459 aa21.84■■□□□ 1.09
PCCB-206ENST00000465423 SLC26A8Q96RN1 970 aa21.84■■□□□ 1.09
PCCB-206ENST00000465423 SLC52A1Q9NWF4 448 aa21.84■■□□□ 1.09
PCCB-206ENST00000465423 ITGAEP38570 1179 aa21.83■■□□□ 1.09
PCCB-206ENST00000465423 ADGRB3O60242 1522 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms