RNA–Protein interactions for RNA: ENST00000465423.5

PCCB-206, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-206ENST00000465423 NISCHQ9Y2I1 1504 aa35.48■■■■□ 3.27
PCCB-206ENST00000465423 ABCC9O60706 1549 aa32.09■■■□□ 2.73
PCCB-206ENST00000465423 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
PCCB-206ENST00000465423 RB1CC1Q8TDY2 1594 aa30.48■■■□□ 2.47
PCCB-206ENST00000465423 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
PCCB-206ENST00000465423 NACADO15069 1562 aa30.24■■■□□ 2.43
PCCB-206ENST00000465423 DCAF8L2P0C7V8 631 aa29.94■■■□□ 2.38
PCCB-206ENST00000465423 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
PCCB-206ENST00000465423 UNC13AQ9UPW8 1703 aa29.82■■■□□ 2.36
PCCB-206ENST00000465423 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
PCCB-206ENST00000465423 BICRAQ9NZM4 1560 aa29.65■■■□□ 2.34
PCCB-206ENST00000465423 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
PCCB-206ENST00000465423 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
PCCB-206ENST00000465423 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
PCCB-206ENST00000465423 SCRIBQ14160 1630 aa29.01■■■□□ 2.23
PCCB-206ENST00000465423 CC2D2AQ9P2K1 1620 aa29.01■■■□□ 2.23
PCCB-206ENST00000465423 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.22
PCCB-206ENST00000465423 EIF4G1Q04637 1599 aaKnown RBP28.9■■■□□ 2.22
PCCB-206ENST00000465423 DNAJC5Q9H3Z4 198 aa28.07■■■□□ 2.08
PCCB-206ENST00000465423 NCAPD3P42695 1498 aa27.95■■■□□ 2.07
PCCB-206ENST00000465423 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
PCCB-206ENST00000465423 CUX2O14529 1486 aa27.78■■■□□ 2.04
PCCB-206ENST00000465423 SMARCA4P51532 1647 aa27.7■■■□□ 2.03
PCCB-206ENST00000465423 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
PCCB-206ENST00000465423 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
PCCB-206ENST00000465423 ERCC6Q03468 1493 aa27.69■■■□□ 2.02
PCCB-206ENST00000465423 NESP48681 1621 aa27.53■■■□□ 2
PCCB-206ENST00000465423 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
PCCB-206ENST00000465423 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
PCCB-206ENST00000465423 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
PCCB-206ENST00000465423 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
PCCB-206ENST00000465423 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
PCCB-206ENST00000465423 THOC2Q8NI27 1593 aaKnown RBP27.31■■□□□ 1.96
PCCB-206ENST00000465423 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
PCCB-206ENST00000465423 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
PCCB-206ENST00000465423 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
PCCB-206ENST00000465423 WIZO95785 1651 aa26.98■■□□□ 1.91
PCCB-206ENST00000465423 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
PCCB-206ENST00000465423 WDR62O43379 1518 aa26.89■■□□□ 1.89
PCCB-206ENST00000465423 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
PCCB-206ENST00000465423 CFTRP13569 1480 aa26.73■■□□□ 1.87
PCCB-206ENST00000465423 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
PCCB-206ENST00000465423 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.86
PCCB-206ENST00000465423 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
PCCB-206ENST00000465423 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
PCCB-206ENST00000465423 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
PCCB-206ENST00000465423 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
PCCB-206ENST00000465423 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
PCCB-206ENST00000465423 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
PCCB-206ENST00000465423 IFT140Q96RY7 1462 aa26.26■■□□□ 1.79
PCCB-206ENST00000465423 ZNF608Q9ULD9 1512 aaPredicted RBP26.24■■□□□ 1.79
PCCB-206ENST00000465423 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
PCCB-206ENST00000465423 ABCC8Q09428 1581 aa26.15■■□□□ 1.78
PCCB-206ENST00000465423 RIMBP3CA6NJZ7 1639 aa26.14■■□□□ 1.78
PCCB-206ENST00000465423 RIMBP3BA6NNM3 1639 aa26.14■■□□□ 1.78
PCCB-206ENST00000465423 RIMBP3Q9UFD9 1639 aa26.14■■□□□ 1.78
PCCB-206ENST00000465423 DNMBPQ6XZF7 1577 aa26.08■■□□□ 1.77
PCCB-206ENST00000465423 EIF4G3O43432 1585 aaKnown RBP26.06■■□□□ 1.76
PCCB-206ENST00000465423 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
PCCB-206ENST00000465423 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
PCCB-206ENST00000465423 AQRO60306 1485 aaKnown RBP eCLIP25.98■■□□□ 1.753e-6■■■■□ 21.1
PCCB-206ENST00000465423 POLA1P09884 1462 aaPredicted RBP25.92■■□□□ 1.74
PCCB-206ENST00000465423 CHD1O14646 1710 aa25.91■■□□□ 1.74
PCCB-206ENST00000465423 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
PCCB-206ENST00000465423 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
PCCB-206ENST00000465423 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.73
PCCB-206ENST00000465423 SOGA1O94964 1423 aa25.8■■□□□ 1.72
PCCB-206ENST00000465423 FBLN2P98095 1184 aa25.78■■□□□ 1.72
PCCB-206ENST00000465423 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
PCCB-206ENST00000465423 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
PCCB-206ENST00000465423 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
PCCB-206ENST00000465423 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
PCCB-206ENST00000465423 CUX1P39880 1505 aa25.68■■□□□ 1.7
PCCB-206ENST00000465423 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
PCCB-206ENST00000465423 CLASP1Q7Z460 1538 aa25.65■■□□□ 1.7
PCCB-206ENST00000465423 MAGI1Q96QZ7 1491 aaPredicted RBP25.62■■□□□ 1.69
PCCB-206ENST00000465423 CHMP7Q8WUX9 453 aaPredicted RBP25.6■■□□□ 1.69
PCCB-206ENST00000465423 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
PCCB-206ENST00000465423 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.69
PCCB-206ENST00000465423 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
PCCB-206ENST00000465423 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
PCCB-206ENST00000465423 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
PCCB-206ENST00000465423 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
PCCB-206ENST00000465423 ABCA10Q8WWZ4 1543 aa25.44■■□□□ 1.66
PCCB-206ENST00000465423 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
PCCB-206ENST00000465423 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
PCCB-206ENST00000465423 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
PCCB-206ENST00000465423 NUP160Q12769 1436 aa25.22■■□□□ 1.63
PCCB-206ENST00000465423 TOP2BQ02880 1626 aa25.22■■□□□ 1.63
PCCB-206ENST00000465423 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
PCCB-206ENST00000465423 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
PCCB-206ENST00000465423 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
PCCB-206ENST00000465423 CEP170Q5SW79 1584 aa25.19■■□□□ 1.62
PCCB-206ENST00000465423 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
PCCB-206ENST00000465423 SHROOM2Q13796 1616 aa25.15■■□□□ 1.62
PCCB-206ENST00000465423 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
PCCB-206ENST00000465423 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
PCCB-206ENST00000465423 PRG4Q92954 1404 aaPredicted RBP24.96■■□□□ 1.59
PCCB-206ENST00000465423 JPH4Q96JJ6 628 aa24.96■■□□□ 1.59
PCCB-206ENST00000465423 KIF13AQ9H1H9 1805 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 229.4 ms